Oncorhynchus nerka (sockeye salmon): 115114558
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Entry
115114558 CDS
T07952
Name
(RefSeq) arf-GAP with GTPase, ANK repeat and PH domain-containing protein 3-like isoform X1
KO
K12491
Arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1/3/4/5/6/9/11
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115114558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115114558
Membrane trafficking [BR:
one04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
115114558
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ArfGap
Ras
PH
Ank_2
Ank
Ank_4
Ank_5
Roc
PH_6
Motif
Other DBs
NCBI-GeneID:
115114558
NCBI-ProteinID:
XP_029498768
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All DBs
Position
LG9b:28211641..28449738
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AA seq
1261 aa
AA seq
DB search
MKTDRFLQLQQFSSNSAAPAAAHPSQIDWETAAVGVEVKAPTAALEQQKTQVETQGQDVS
PQTEVPLAGHHGGVPAGGVLAGGGSPPRAVLRRRPSQDGAAPHNRRAVSMYGAAARQHRG
SLSRQDRQDRPRSVCMLAGPNLNPTLSEPGSHSQHTSRRGATRSLDGPPQQRWTRRAELR
AVDGLKPGVLPQWTVAGAEEKVVPRVRQQTWKPRPVSMTVLELRKKASGSQEGLDSQGGS
QGGGLFGRWRLFGRPAQDKEKEEAPDPGSNPSSKPDAPKKTLSSLRRSLSLRIRRNRPRE
RVDISEVTAEERSRTTSMEQETSLPLRPFSYLTGRTLPPPCERDDDGGRQFIHYHSQGKV
KVMEVPLYPAKLSSSTKPAQEEPSLWQLIARRFRRKEQQQPSNGKCELQPRHQSKETGKY
SLGRIKKPQSVAIETLADCNKVQDSFVNSQEWTLSRSVPELKVGIVGNLSSGKSALVHRY
LTGTYVQEESPEGGRFKKEMVVDGQSYLLLIRDEGGPPELQFAAWVDAVVFVFSLEDEIS
FQTVYNYFLRLSSYRNTAEVPMVLVGTQDAISAANPRVIDDSRARKLSNDLKRSTYYETC
STYGLNVERVFQDVAQKVVALRKKQQLSIGPCKSLPNSPSHSSVPNASIPSVHINQSANG
GGVFSDYSSSVPSTPSISQREMRIETIAASNTPTPIRKQSKRRSNIFTSRKANSEQAKNT
DSKTDSIGSGRAIPIKQGILLKRSGKSLNKEWKKKYVTLCDNGLLTYHPSLHDYMQNVHG
KEIDLLRTTVKVPGKRPPRAVTTIAPTASPKTNGLTKDRSTLQLGVGTAGAPHSNSSTSL
QSEHSVGGGNLVGFGGSKDGMHQRSFSVSSADQWNEAVINTSASTGTANGMAEPLTCSYG
VGSATSPKQEPPPSPHSNRKRHRRKKSTGITKPDGPSTGNEESEESFEFTIVSLTGQMWY
FEASTFEERELWVTAIESQIFASLQSCESMKNKSRLGSQSDAASIQSIRNVRGNSFCVDC
DTANPDWASLNLGALICIECSGIHRNLGTHLSRVRSLDLDDWPVELSMVLMAIGNTMANS
VWEGALEGYTKVGTDSTREERERWIRAKYEQKLFLMDVPQSDVPLGQQLLRAVVEDDLRL
VVLLLAHGTKEEVNETYGDGDGRTALHLSCAMANVVITQLLIWYGVDVKSRDARGQTPLS
CARRAGSQECSDILLQHGCPNDPVSSLTTPNMSRRNPDVNPNPNVNNNNALGELNRSVSI
M
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgaagacggaccggtttctccaactccaacagttctctagtaactcagcagctccagca
gcagcccatccttctcagattgactgggagactgcagcggtaggagtagaggtaaaggca
cctacagcagctctagagcaacagaagacccaggtagagacccagggacaggacgtttct
ccccagactgaagtgcctctcgctgggcatcatggtggtgtccctgccggtggtgttctg
gccggtggtggctctccaccccgggctgtgctccgcaggaggccatcccaggacggtgct
gctccacacaacaggagggcggtgagcatgtatggagccgcagccaggcagcatcgaggc
tcgctaagccgccaggacagacaggacaggcccaggagtgtgtgcatgctcgcaggcccc
aacctaaaccctaccctatcagagcccgggtcccactcccaacacacctccaggaggggg
gctacaaggtctctggacggccccccacagcagcgctggaccaggagggcagagctgcgg
gcggtggacggccttaagccaggggtgctccctcagtggacggtggcgggggctgaggag
aaggtggtccccagggtccggcagcagacctggaaaccgagaccggtcagcatgactgtg
ttggagctgaggaagaaggcctcggggtctcaggaggggctggacagccaaggaggaagc
caggggggaggtctatttggccgctggaggctgttcggccgaccagctcaggacaaggag
aaggaggaagccccagacccaggctccaatcccagcagcaagccagatgcccccaagaag
accctgagctccttacgccggagcctcagtctgcggatcaggaggaaccggccgcgggag
agagtggacatttctgaggtgacagcagaggaacgctcacgcactacaagtatggagcag
gagacatctctccccttgcggcccttctcctatctgactgggaggaccctgccacctcct
tgcgagagggacgatgatggagggaggcagttcattcattaccacagccagggcaaggtt
aaggtgatggaggtgcccctctacccagccaaactgtcctcctctactaaaccggcccag
gaggagcccagcctatggcagctcatagccagacgctttaggaggaaggagcagcagcaa
ccgtccaacggtaaatgtgaactccagccccgacaccagagcaaagagactggcaaatat
tccctgggcaggattaaaaagcctcagtcagttgcaatagagactctggcagactgcaac
aaagttcaagactctttcgtcaatagccaggagtggacattgagtcgatcagtgccagag
ctcaaagtgggtattgtgggtaatctgtcgagtgggaagtctgccttggtccaccggtac
ctgacaggcacatatgtgcaggaggaatctcctgaaggtggtcggttcaagaaggagatg
gtggttgatggacagagctacctgctgctgatcagagatgagggaggccccccggagctg
cagtttgcagcatgggtagacgctgtggtgtttgtcttcagtctggaggatgagatcagt
ttccagacagtctacaactatttcctgcgtctgtccagctacaggaacacagcagaggtc
cccatggtcctggttgggacgcaagatgccatcagtgctgccaaccccagagtgatcgat
gactcgcgggcgaggaagctgtccaacgatctgaagcgctccacctactacgagacctgc
tccacctatggcctcaatgtggaacgagtcttccaggatgttgcccagaaggtggtggct
ctgaggaaaaagcagcagctgtctattggtccgtgcaagtccctgcccaactctcccagc
cactcatcagtccccaacgcatccatcccctctgtgcatattaaccagtcggcaaacggc
gggggtgtgttcagcgactactcctcctctgtgccctccactcccagcattagccagagg
gagatgcgtatcgagaccattgctgcctccaacacgcccacacccatccgcaagcagtcc
aagcgccgctccaacatcttcacttcacggaaagccaacagtgaacaggcaaagaacact
gacagtaaaacagatagcataggcagtggaagggccatacccatcaaacagggcatcctt
ctgaagagaagtgggaagtccctgaataaggagtggaagaagaaatacgtcacactgtgt
gacaacggccttctcacctaccaccccagtttacatgactacatgcagaatgtgcacggt
aaagagattgacctgttgaggaccacggtcaaggtgccagggaagcgaccacccagagcg
gtcaccaccatcgcccccactgccagccccaagaccaacgggctgaccaaggaccgtagc
accctgcagctaggagtgggcactgcaggtgcgccccactctaacagtagtacgtccctc
cagtcagagcattcggtcggcgggggaaatctggtgggcttcgggggcagtaaagacggc
atgcaccaacgctccttctctgtgtccagcgctgaccaatggaacgaggctgtcatcaac
accagtgcaagcaccgggaccgccaacgggatggccgagcccctgacctgcagctatggg
gtgggcagtgccaccagtcccaagcaggagcctcccccctcgcctcactccaaccgcaag
agacacagacggaaaaagagcacaggcatcaccaagccagacggaccatctacaggcaac
gaagagtcggaggagtcgtttgagttcaccattgtgtctctgacaggccagatgtggtac
ttcgaagcgtctacgtttgaggagagagagctgtgggtcacagccattgagagccagatt
tttgccagcctgcagtcctgtgagagcatgaagaacaagtcccggttaggcagccaaagt
gacgcggcatccattcagtctataaggaacgtgagagggaacagcttctgtgtggactgt
gatacagccaaccctgactgggccagtctgaacctgggggctctgatctgtatagagtgc
tcagggatccacaggaacctggggacccacctgtcgagggtgaggtctctggacctggat
gactggcctgtggagctcagcatggtgctgatggctataggcaacaccatggccaacagt
gtctgggagggggccctggagggctacaccaaggtgggcactgacagcaccagggaggag
agggagcgttggatccgggcaaagtatgaacagaagctgttccttatggatgtcccccag
tcggatgtgcccctggggcagcagctacttcgggctgtggtggaggacgacctgaggctg
gtggtgctgctgctggcccacggcaccaaggaggaggtcaacgagacgtacggggacggg
gacggacgcactgccctgcacctgtcctgcgccatggccaatgtggtcatcacccagctt
ctcatctggtatggtgtggatgtgaagagtcgggacgctcgcggccagacgccgctgtcc
tgcgcccggcgggcaggaagccaggaatgttctgacatcctgctccagcacggctgcccc
aatgaccccgtcagcagcctgaccacacccaacatgagccgcagaaaccccgatgttaac
cctaaccctaatgtcaacaataacaacgccctcggtgaactcaaccgcagtgtcagtatc
atgtag
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