Oncorhynchus nerka (sockeye salmon): 115114618
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Entry
115114618 CDS
T07952
Name
(RefSeq) fizzy-related protein homolog
KO
K03364
cell division cycle 20-like protein 1, cofactor of APC complex
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04110
Cell cycle
one04120
Ubiquitin mediated proteolysis
one04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115114618
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
115114618
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
115114618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115114618
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
115114618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_EML
EIF3I
WD40_Gbeta
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
WDR55
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_WDR36-Utp21_1st
eIF2A
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Beta-prop_Vps41
Beta-prop_WDR35_TULP_N
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_RIG_1st
Beta-prop_VPS8
Tricorn_2nd
WD40_RFWD3
Beta-prop_Nup120_160
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
115114618
NCBI-ProteinID:
XP_029498878
LinkDB
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Position
LG9b:complement(30849072..30855918)
Genome browser
AA seq
486 aa
AA seq
DB search
MDQEYERRLLKQINHQNLPEGQLAKSGGATCSPLRVKSGDRFIPTRVGSNWCINFHYANE
NCQSPNQNHRSKDAGSDTGKDTVAYAALLRNELLGAGIESVPDLHTEDRRHTVFSQDTHS
LFRYTVHTKRVPFDSGNEVSPYSLSPLSNKSHKLLRSPRKPARKISKIPFKVLDAPELQD
DFYLNLVDWSAGNLLSVGLGACVYLWSACTSQVTRLCDLSVDGDSVTSVCWNERGSLVAV
GTHKGYVQIWDAAGGRKLTSLEGHSARVGALAWNGEQLSSGSRDRVILQRDVRTPPSAER
RLQGHRQEVCGLKWSPDHQHLASGGNDNKLLVWNSSSLLPMQQYSDHLAAVKAIAWSPHQ
HGLLVSGGGTADRCLRFWNTLTGQPLQSTDTGSQVCNLAWSKHANELVSTHGYSQNQILV
WKYPSLNQVAKLTGHSYRVLYLAVSPDGEAIVTGAGDETLRFWNVFSKTRCTKESKSVLN
LFTRIR
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggaccaggaatatgagagaaggctgctgaagcaaatcaaccatcagaacctaccagag
ggccagctggctaagtctggaggtgcgacctgcagtcctctccgtgtcaaatctggggac
cgattcattcctacccgtgttggaagcaactggtgtatcaacttccactatgccaacgag
aactgtcaatctcccaaccagaaccacaggtcgaaggatgctggatcagacacggggaaa
gacactgtggcatatgctgctctgctgaggaacgagttgctgggggcggggatagagagc
gttccagacctccacactgaggaccgccgccacaccgtcttctcccaggacacacacagc
ctcttcaggtacacagtccacactaagagagtgccttttgacagtggcaatgaagtctcg
ccatactcgctctccccactcagcaacaagagtcacaagctccttcgttcccctcggaag
ccagcccgtaagatctccaagatccccttcaaagtgctcgacgcccctgagctgcaggat
gacttctacctcaacctggtagactggtccgctggcaacctgctgtctgtgggcctgggg
gcctgtgtgtacctgtggagcgcctgcaccagccaggtgacaagactgtgtgacctgtca
gtggatggggactctgtgacatcagtatgttggaatgaaagggggagcctcgttgctgtg
ggaacccataagggctatgttcagatctgggacgcagctggagggagaaagctgaccagt
ctggaaggccactctgctcgtgtcggagcactggcgtggaatggagaacagctgtcttca
ggcagcagggaccgtgtgatcctccagagggacgtccgcacccctccgtccgctgagagg
aggctccagggccacaggcaggaggtgtgtggcctcaagtggtcccccgatcaccagcac
ctggcctctgggggcaacgacaacaagctgctggtgtggaacagctccagcctgctcccg
atgcagcagtacagtgaccacctggctgcagtgaaggccatcgcctggtcaccccaccag
catgggctactggtgtctggaggaggaacggccgaccgctgtctacgcttctggaacacc
ttgacaggccagcccctgcagagcactgacacaggctcccaggtctgcaacctggcctgg
tccaagcacgccaatgagctggtgagcacccatggctactctcagaaccagatcctggtg
tggaagtacccgtctctgaaccaggtggccaagctgacgggacactcctacagagttctc
tacctggctgtgtcaccagacggagaggccattgtgacgggggcgggagacgagactctg
cgtttctggaatgttttcagtaagacacgctgcaccaaggagtccaagtcagtgttgaat
ctctttaccaggatacgatag
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integrated database retrieval system