Oncorhynchus nerka (sockeye salmon): 115114682
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Entry
115114682 CDS
T07952
Name
(RefSeq) AP-1 complex subunit gamma-1-like isoform X1
KO
K12391
AP-1 complex subunit gamma-1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
115114682
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115114682
Membrane trafficking [BR:
one04131
]
Endosome - Golgi transport
Others
AP-1 complex
115114682
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Ortholog
Paralog
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptinC2
Cnd1
CLIPPER
Peptidase_M73
HEAT_GCN1
Motif
Other DBs
NCBI-GeneID:
115114682
NCBI-ProteinID:
XP_029498988
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Position
LG9b:complement(31890030..31904467)
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AA seq
790 aa
AA seq
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MSPSVRLQEMIRVIRGARTQGEERGVIQRECAAIRAQFRQADNGTRSHNLAKLLYVHMLG
YPAHFGQMECVRLIASPRYNEKRVGYLGAMMLLDEKQDASLLITNSIKNDLSHSSQYVQS
LALCTLACMGSAEMCRDLAPEIDRLLRASNSYIKKKAALCAVHMVRKVPELGELFTPAAR
SLLSEKNHGVLHGAVVLITELCERNPDTLEQFRKAVPELVLMMKGLVMSGYSPEHNVAGI
SDPFLQVRILRLLRILGRNNDTASDAMNDLLAQVATNTDSSKTAGSAVLYETVLTVMDIK
SESGLRVLAVNILGRFLLNNDRNIRYISMTSLQKIVQTDHNAVQRHRGTIVDCLKDQDAS
VKRRALELSLALVSAVNIRSLMKELLLFLSSCPPELRAHTTSGIFNAAERYAPSQRWHID
TILHVLTTAGGDVRDETVPNLIQLITTATELHCYTVHKLYRALITDISVQSLVQVACWCI
GEYGDLLLRGECEETEPVQVTEDDVLDALETVLQSHMSSPATRGFALTATMKLSTRITHN
VDRIRSIVSIYGSCIDVELQQRAVEYNALFKKYDHMRAAVLERMPVIDKSSPRHTNGESA
GGTIKELEPTKLTQEIVFPQEPSNQVCDLLDLLGGSGEPFQPSPSLSSTAPGPASSTAGG
DLLDLLGGLDVTPAPPSVTVYEKNGVTLKLQTDTQTDTGMTVTLTATNSTDGDITGLTLQ
AAVPKSVQLQMKAPSGDVIPAHGLGQVTQTVLLNNPNKVSLKIRVRVCYTSQSSVCQDTV
QIDSFPSTAW
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtctccttcggtgcgtctgcaggagatgatcagggtgatcagaggagcccgtacacag
ggtgaggagcgtggtgtgatccaaagagagtgtgctgccatccgggcacagttcagacag
gctgacaatgggacccgctctcacaacttggcaaagctgctgtatgtgcacatgctgggc
taccccgcccactttggtcagatggagtgtgtgcgtctgattgcaagccctcggtacaat
gagaaacgtgttgggtacctgggtgccatgatgcttctagacgagaaacaggatgccagc
ctgctcatcactaactccatcaagaatgacctgtcccacagcagtcagtatgtccagtct
ctggctctgtgtactctggcctgtatgggctcggctgagatgtgtcgagacctggcccca
gagatcgaccgcctcctcagagcctcaaactcctacatcaagaagaaggcagctctatgt
gcagtacacatggtgagaaaagtaccagagctaggggagctgttcacccctgcagctcga
tccctgctctctgaaaagaaccacggggtgttacatggagctgtggttctgatcactgag
ctgtgtgagcgcaacccagacactctagagcagtttcgtaaggcggtgccggagctggtc
ctgatgatgaaaggcctggtgatgtcgggctactctccagaacacaatgtggctgggatc
agtgacccattcctgcaggtgcgcattcttaggttgctgaggatcctggggcgcaataat
gacacagccagtgatgccatgaatgacctgctggcccaggtggctacgaacacagacagc
agtaagaccgcaggcagtgctgttttgtatgaaactgttcttactgtcatggacatcaaa
tcagaaagtggcttgagggtcttggctgtgaacatcctggggagatttcttctgaacaat
gatcggaacatccggtatatttccatgacttcccttcagaaaattgttcagacggaccac
aatgcagtgcagcgtcacagggggaccatagtggactgcctgaaggaccaggatgcttct
gtcaaacgccgggcgttggagctttctttggccctggtgtcagctgtcaacatccgctct
ctgatgaaggagcttctcctcttcctctccagctgtcccccagagctccgagcacacacc
acctcgggcatcttcaacgctgcagagaggtatgctccctctcagcgctggcacattgac
accatcctgcatgtcctcaccacggcagggggtgatgtgcgggatgagacggtgcccaac
ctgatccagctcatcaccaccgcaacagaacttcactgctacacggtccacaagctgtac
agagccctgattacagacatctcagtgcaatccctggtacaggttgcgtgctggtgtatt
ggggagtatggagacctgcttctgagaggagagtgtgaggagacagaacctgttcaggtg
acagaggatgatgtcctggacgccttggaaacggttctacagtcacatatgtcatcgcca
gcaaccaggggcttcgctctcacagcaaccatgaaactcagcacacgtataacacataac
gtggatcgcattaggagcatcgtcagcatctacggcagctgtatcgacgtggaactccag
cagagagcagtggaatataacgctctcttcaagaaatacgaccacatgagggctgcggtg
ctggagagaatgccggtgattgacaaaagctccccgagacataccaatggagaatcagca
ggggggactatcaaagagttggagccaaccaaactgacacaggaaatagtatttccccag
gaaccttctaatcaggtgtgtgatctgttggacctgctgggtggttctggggagcctttc
cagcccagcccatccctgtccagcacagcacccggcccagctagcagcacggctggggga
gacttactggacctgctgggaggcctggatgtaacacctgcaccacctagtgttacagtg
tatgagaaaaacggtgtgacgctgaaactacagactgacacacagacagacacagggatg
accgttaccctcactgccaccaactccactgacggggacatcactggcctcacactgcaa
gcagcagtacccaagagcgtccagttacagatgaaggctccgagtggtgacgtcatccct
gcgcatggcttaggtcaggtgacccagactgtgctcctcaacaacccaaacaaggtgagt
ctgaagattagggtgcgtgtgtgctacaccagccagagctctgtctgccaggacacggtg
cagatcgactccttcccaagcactgcctggtaa
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