Oncorhynchus nerka (sockeye salmon): 115114688
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Entry
115114688 CDS
T07952
Name
(RefSeq) capping protein, Arp2/3 and myosin-I linker protein 3-like isoform X1
KO
K20493
leucine-rich repeat-containing protein 16
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115114688
Membrane trafficking [BR:
one04131
]
Others
Actin-binding proteins
Nucleation-promoting factors (NPFs)
115114688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CARMIL_C
Carm_PH
LRR_6
Motif
Other DBs
NCBI-GeneID:
115114688
NCBI-ProteinID:
XP_029499000
LinkDB
All DBs
Position
LG9b:32244460..32295803
Genome browser
AA seq
1434 aa
AA seq
DB search
MASKETTAAVFINVSREITESIRRLTDKQSIKFVRAVKQDTKNGKSEDRILVLATWRLFL
FAVKVPSKMEVTFNFLEIRAMNTYPDHQVVIDTDKSTHSLRLQSQDHLDHMMNHVNFALS
RIFNNSMYAPAICRTEGDVSDGVQKFSPNSESSVETQKTCGGFSETYAALCDYNGIGCKD
EVQWDVDTIYHSQDNREFNLLDFSHLDSRDLAVMVASMAYNTWFTKLYCKDMRIGSEVVE
QVLHTVSKSSSLEELTLENAGLKLDFPQKMATALSENPASVIHSLNLAHNPLDNQGVSNL
IQLVCRLNKGLRLLNLSKTSLSSKGVVSLSQALCSSDDYTNSLLHLDLSKNPGILSGEDA
TNMYLFLAQTNCLVHLDLSGTDCAVDLLFGALLRGCCADLSYLNLSKNCFSHRKVRETLP
VFRQFFSSAFSLTHVNLSSMKLPLDTLRALFLGLSSNPHITDLHLDISGCELRSAGAGVL
QELFPRVACIGTLDISDNGLDGDLLGVIPAFSRHPSLKHLLLGKNFNIKGRVLHEILQKL
VQLVQDEECALQSLSLADSRLRSRGTVMVNALGSNACLRKVDLSGNSLEDAGAKMLSKAL
QINTTLRSVTWDRNNTTATGFQDVARGLEHNFTLQYMPIPLSDVTQAYRSAPEKIDQALT
KIQHALLRNNQTQRFSQKQALRLHQGLVTSTAEQVMERLCVRVHQQVCVLRGSEEGKELQ
AARQVLKEARNSRALYPSLCELVHVLSVDGPVRQKLDFLAGELTKAADKELQVIVDSMVS
LCRELCPMSSSAAERLNPPLSSISERVSIPRSTIRTALMERAAQDINRALEEVKLSVVSY
LTNSIVDQILQELYTTHKALLRQVSQVKRWDDGGTGRHTIRITDTLDFPDEEGLGMNIDT
IAIQKRSARTRRIRPVSTRLSLGDDPTSSPPPSALSHSAPLSRSASWECLSSLPTHGAPL
RHVTHARPRPPRRHSRGQVPLDTHCSENGGVNLLEDGLPDFYTKRVLTDSQLSSLHHAQS
LRRKKRRSVLSIFSGFRKNRNSTISNQETDGSENVYSMIQHPKDPGKVEAMIEVGANGRM
MPSPRPIQGVPLPGMRGASPSPHCLTQRQPSDLVSMVYSCIGAEDEDSDSSFETRPVDRD
TDRSTTSDIQTETHANGHAMSSASLTDRQPDRQPDRQTDPVGQDLPMPSTQTDTQKEVDR
GTKGTESLDRQEGAPCGQKSEPPSQSSKPSLASMRQRHLQGSSDKSTDGVGWIDRDGVEE
EKNEKKDRGAEGQRPPIPEKPGKDKTSPKTPSAVTPPEETANERTPPPVPTASTKPTFDL
SGPSVTQDGGTNEMKSLPPVPPASTKPVVDAGLPPAGCQDEGGTNGFPLKAHRNRKANSC
DAGMEPDSPNDLERGFSDRESPVKKPRLPQNRNRSLDTGCPECPEPGTGNGETS
NT seq
4305 nt
NT seq
+upstream
nt +downstream
nt
atggcctctaaagagaccaccgctgcagttttcattaacgtcagcagggaaattacagag
agcatcaggaggctcactgataaacaatccatcaaatttgtgcgagctgtgaagcaggac
accaagaacggcaaatcagaggaccggatactggttctggcaacatggcgactctttcta
tttgctgtcaaagtcccctccaagatggaggttactttcaacttcctggagattcgggca
atgaacacttatccagatcatcaggttgtaatagacacagacaagtcaacccactccttg
agactgcagtcacaagaccaccttgatcacatgatgaaccatgtcaactttgccctctca
agaatattcaacaactctatgtatgctccggccatctgtcgaacagagggggacgtctct
gatggagtccaaaagttttcaccaaactctgaatcatctgtagagactcagaaaacctgt
ggcggtttctctgagacctacgcagctctgtgtgactataatggcatcggctgtaaggac
gaagtgcagtgggatgtggacaccatctatcactctcaagacaacagggagttcaacctg
ttggacttcagccacctggacagcagggacctggcggtgatggttgcttccatggcgtac
aacacttggttcaccaaactctactgcaaagacatgcgcattgggtcagaggtggtggag
caggtccttcacaccgtcagtaagtccagcagtctggaagaactcactctggagaacgct
ggcctcaaattagatttccctcagaaaatggcgacagctctgtctgaaaaccctgcctct
gtgatccactcactcaacctggcccacaaccccctggacaaccaaggagtgtcaaacctc
atccaactggtgtgtcgcctcaacaaaggccttcgtctgctcaacctctccaagacgtcc
ctctcctctaagggtgtggtgtctctctcccaggccctctgctccagtgatgactacacc
aactctctgcttcacctggacctgagtaagaaccctgggattctgtctggggaggacgct
acgaacatgtacctgttcctagcccagacgaattgcctggttcatttggacctctctggg
actgactgcgctgtggacttgttatttggcgctctgctgaggggatgttgtgctgatctc
tcttacctgaatctctccaagaactgcttctctcacaggaaagtgagggagactcttcct
gtcttcaggcagttcttcagctcagccttcagtctcacacacgtcaacctgtcttctatg
aagcttcctctggacaccctgagagctctcttcctgggcctgtcttccaatcctcacatc
actgatttacacttggacatcagcggctgtgagctgaggtcggcaggtgccggggtgctc
caggagctgtttcctagagtggcctgcatcggaactttggacatatcagacaacgggttg
gatggtgacctgctgggtgtcatcccagccttctccagacacccctccctcaaacacctg
ctgctgggcaagaacttcaacatcaagggcagggtactacatgaaattctgcagaaacta
gttcagctagtgcaagatgaagagtgtgccctgcagtccctttctctggctgactcgcgc
ctgcgctctcggggcacggtgatggtgaatgctctgggaagcaatgcttgcctacgcaag
gtggatctgagtgggaacagcctggaggatgcgggggctaagatgctcagcaaagccctg
caaatcaacactacactcaggagtgtgacgtgggatcgcaataacaccacggctacagga
ttccaggatgtggctcggggcctggaacataacttcaccctgcagtacatgcctatcccc
ctcagtgatgtcacacaggcataccgaagcgcacctgagaagattgaccaagcactgacc
aagatccagcatgctctgctgaggaacaaccagacccagaggttctctcagaaacaggct
ctgcgtctacaccagggcctggtcaccagcactgctgaacaggtgatggagcggctgtgt
gtacgcgtacaccagcaggtgtgtgttctccgaggctcagaagaaggaaaggagctgcag
gctgccagacaggtcctgaaggaggccagaaactcccgtgcgctatacccatctctgtgt
gagctggttcatgttctctcagtggatgggcctgtcagacagaaactggactttctggca
ggagagctgaccaaggctgctgataaggaactacaggtgatagtagactccatggtgtct
ctgtgtcgggagttgtgtcccatgtcctcctctgcagcagagagactcaaccctccgctc
tcatccatctcagaacgcgtctctatccctcgctccaccatccgcaccgccctgatggag
agagcagcacaggacatcaacagagccctggaggaggtgaagctgtctgtggtctcctat
ctgaccaactccatagtggaccagatccttcaggagctctacaccactcacaaagccctg
cttcgtcaggtgtcccaggtgaagcgttgggatgatggaggaacaggcagacacaccatc
agaatcacagacacactggacttccctgatgaggaaggcctgggcatgaacatcgacacc
attgccatccagaagcgcagcgccagaacccgaaggattcgacctgtgtccaccagactg
agtctgggagatgatcccacctcctctcctcctccctcggccctgtctcactctgccccc
ctgtcccgctcagcatcatgggagtgtctatcctcattgcctacccatggtgcaccactg
cgacacgtgacgcacgccaggccgcggccccctcgaaggcacagccgaggacaagtccct
ctggacacacactgttcagaaaacggaggagtcaacctgctggaggatggactgcctgat
ttctacaccaagagagtcctgactgacagtcagctgtcatcacttcatcatgctcagtcc
ctgaggaggaagaagagacgcagtgtgctgtcaatcttctctgggttccgcaagaatcgc
aattccaccatctccaatcaggaaacggatggctcagagaatgtgtactctatgattcag
caccctaaggatcctgggaaggtggaggccatgattgaggtgggggccaatgggaggatg
atgccttcccccaggcccatccagggtgtaccactgcctgggatgaggggggccagcccc
agcccccactgtctcacacagagacagccttcagacctggtcagcatggtgtacagttgt
atcggagcagaagatgaggactccgacagtagctttgagaccagaccagtggacagagac
actgacagatcgactacatcagacatccagacagagacccatgccaatggacatgcaatg
tcctccgcttctctgacagacagacagcctgacagacagcctgacagacagacagatcca
gtcggtcaggacctgccaatgcccagcactcagacagacacacagaaggaggtggacaga
gggacaaaggggacagagtcgttggacaggcaggagggagccccctgtggacagaaatca
gaacccccttctcagagcagcaagcccagtctggccagcatgagacagagacacctgcag
gggagttccgataaatcaacagatggtgtaggatggatagatagagacggggtagaagag
gagaagaatgaaaagaaagacagaggagcagaaggacagcgtcctcccattcctgaaaag
cctggtaaagataagacttctccaaagacaccgtctgctgtcactccacctgaggaaaca
gccaatgagagaaccccgcctcctgttccaactgcctctaccaagcccacttttgatttg
tctggtccttctgtcactcaagatggaggaactaatgagatgaaaagcctgcctcctgtg
ccacctgcgtctaccaagccggtggtagacgcaggtctaccacctgctggttgtcaagat
gagggaggaacaaatggttttccactgaaggcacatcgcaacaggaaagcaaactcatgt
gacgcaggcatggaaccggacagtcccaatgatctggagagggggttctcagatcgcgaa
tcccctgtgaaaaaacccagactcccccagaacagaaacagatctctggacactgggtgt
cctgaatgtcccgagcccggcaccggcaatggtgagacgtcatga
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