Oncorhynchus nerka (sockeye salmon): 115114767
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Entry
115114767 CDS
T07952
Name
(RefSeq) ski-like protein isoform X1
KO
K18499
Ski-like protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
115114767
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Gene cluster
GFIT
Motif
Pfam:
Ski_Sno_DHD
c-SKI_SMAD_bind
Filament
betaPIX_CC
CorA
UBA_BRSK
Motif
Other DBs
NCBI-GeneID:
115114767
NCBI-ProteinID:
XP_029499118
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Position
LG9b:complement(35225909..35267786)
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AA seq
762 aa
AA seq
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MASTQTSLKTPFKDLTSFKGNMKQLYRERIEDVPIKKRLMAEMNLKRRNLDPLPPLPWTP
KVKREAGEEQTQDREVDPGMTRSIEMDSRGEFQVCGAKALDLSPGLKHTLAAFTLSSARS
LGGPAAFSARSGHEASSSPGPGSYPGMAPLPSPPVLGGIPLLVPSDSSTELSHSLLEGES
ISCFAVGGEKRLCLPQVLNSVLRHFSLQQINSVCDELYVYCSRCDGEQLHILKVLGILPF
NAPSCGLITLTDAQRLCNALLRPGAVLPSEPITKLPGQELLKETEASFQVEHQCLGKCQG
LFVPQFYAKPESPCIQCVECQLLFSPQKFVMHSHKSPDKRTCHWGFDSAKWPCYLQLGRK
YLGTAEEPQLKQLLEDMKDKFHYNRTSDKKVVEEDGEVRRSSPPEPLASLNSKLADNDAA
TKVQGQAQATLVFPHIKEEPSHPSYNLYTYDKMVAPNVSLRDQPEVSSEVLGVLLKHHYS
RRLAHGHQDTAMGQYHTHTHLHATPPAPPVVNDAKSQQRVVSTADRDRHQPVSMETIPSN
KSSSAVAMTTSVAALGSKDVLSSVCEDDKERIVVEIVQMYSRQQEKLHSTLHNQLQLEME
LEALRGGEAVRLQQLAAEQCELQSELEAVHTEHAHRLGQVREEQRELEHRLEQLRQQSCV
CDNTHQEERYANQLAELRGRLDGAEADRDKLQEELRSERDAREKLERIISQLQQQMGQTA
STSASFVTTGSPSPPSTPSSHTPHTEGHTAGPAEQQNGHAHK
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atggccagtactcagacgagtctgaaaaccccattcaaagacctgacctcgttcaagggc
aacatgaagcagctgtaccgtgagagaatagaagacgtgcccattaagaagaggctgatg
gctgagatgaacctgaaacgccgaaacctggaccctctgccccccctgccctggaccccc
aaggtaaagagggaggctggggaagagcagacccaggaccgggaggtggatccaggcatg
actagatcaatagagatggacagtaggggggagttccaggtatgtggagcgaaagcttta
gacctgagccccgggctgaaacacacgctggcagcctttactctcagcagcgcgcgctct
ctggggggcccagcagccttctcagcccgttctggccacgaagcatcctcctcccccggc
cctggttcctaccctggcatggcacctctaccctcccctcctgtgctgggaggtataccc
ctgctggtgcccagtgacagctccacagaactcagccactcccttctcgagggagaatcc
atctcgtgctttgccgtcggcggggagaaacgcctctgcctcccccaggtactcaactcg
gttctccgccacttctccttgcagcagatcaattccgtgtgcgacgagctctatgtgtac
tgctcacgctgcgacggggaacagctccacatactcaaggtgctgggtattttacccttc
aatgctccgtcctgcggcctcatcaccttaactgacgcccaacgcctctgcaatgccctc
ctccgcccgggggctgtcctcccctccgaacccatcaccaagctacccggccaggagctc
ctcaaggagacggaggccagcttccaggtggagcaccagtgtctcgggaaatgccagggt
ctgttcgttccccaattctacgccaagcccgagtcgccctgtattcagtgcgtggagtgc
cagctgctcttctctccgcagaagtttgtgatgcactctcacaagtcgccggacaagagg
acctgtcactggggctttgactcggccaagtggccgtgctacctgcagctggggaggaag
tacctgggaacggcggaggagccgcagctcaaacagctgttagaggacatgaaggacaag
ttccactacaaccgaaccagcgacaaaaaggtggtagaagaggacggcgaggtgagaaga
tcgtctcctccagaacctctagcgtcccttaacagtaaactagccgacaacgacgcagcg
accaaggttcaaggccaagcccaggctactctggtgttcccccacatcaaggaagagccc
agtcaccccagttacaacctgtatacatatgataagatggtggctcctaatgtgtctctg
agggatcagccggaggtcagctctgaggttctgggggtgctgctcaaacaccactacagt
aggagactggcccacggccaccaagacactgctatgggtcagtaccacacacacacacat
ctccatgccactccccctgctcctcccgttgtcaatgatgccaagtctcagcagcgcgtt
gtttctactgctgaccgggaccgccaccagccagtttccatggagaccatccccagcaac
aagagttcttctgctgtagcgatgaccacgtcggtagcggcgctggggagtaaagatgtc
ctgtcttctgtctgtgaggacgacaaggaaaggatcgtagtggagatcgttcagatgtac
agcagacagcaagagaagctgcattccaccctgcacaaccagctgcagctagagatggag
ttggaggcgctgcgtggaggcgaggctgtcaggctgcagcagctggcagcagagcagtgt
gagctgcagagtgagctggaggcggtgcacactgagcatgcccacaggctggggcaggtg
agggaggagcagagggagttggagcacagactggaacagctgagacagcagagctgtgtg
tgtgacaacacacaccaggaggaacgctatgctaaccagcttgcagagctgcgtgggagg
ttggatggtgcggaggctgaccgggataagctccaggaagagttgcggagtgagcgggat
gcccgggagaagctggaaagaatcatctctcagctccaacagcagatgggccagacggcc
tccacctcagcctccttcgtcactacagggagcccctctccgccctccaccccctcctct
cacaccccccacacagagggacacaccgctggccctgccgagcagcagaacggccatgcg
cataaatag
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