KEGG   Oncorhynchus nerka (sockeye salmon): 115114794
Entry
115114794         CDS       T07952                                 
Name
(RefSeq) WD repeat-containing protein 48-like isoform X1
  KO
K15361  WD repeat-containing protein 48
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    115114794
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:one03400]
    115114794
DNA repair and recombination proteins [BR:one03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   FA (Fanconi anemia) pathway
    Other FA pathway factors
     115114794
SSDB
Motif
Pfam: WD40_Prp19 DUF3337 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_SCAP Beta-prop_EIPR1 Beta-prop_SPT8 ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_DCAF12 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_DCAF4 WD_LRWD1 Beta-prop_Vps41 Beta-prop_IP5PC_F WDR54 WD40_RFWD3 Beta-prop_HPS5 WD40_like RAWUL Nucleoporin_N Tfb2_C
Other DBs
NCBI-GeneID: 115114794
NCBI-ProteinID: XP_029499157
LinkDB
Position
LG9b:complement(36530427..36550605)
AA seq 690 aa
MRVRLSTCKMAAHHRQNAAGRRKVQVSYVIRDEAEKHNRNGVNALQLDPALNRLFTAGRD
SIIRIWSVNQHKQDSYIASMEHHTDWVNDIVLCCNGKTLISASSDTTVKVWNAQKGFCMS
TLRTHKDYVKALAYAKDKELVASAGLDRQIFLWDVNTLTALTASNNTVTTSSLSGNKDSI
YSLAMNQMGTVIVSGSTEKVLRVWDPRTCAKLMKLKGHSDNVKSLLLNRDGTQCLSGSSD
GTIRLWSLGQQRCIATYRVHDEGVWALQVNEAFTHIYSGGRDKKIFCTDLRNPDIRVLIC
EEKAPVLKMELDRTADPPPVIWVSTTKSSVNKWCLKGIHNFRASGDYDNDIIAPLTPLCT
APEQVIKGGASIIQCHILNDKRHIVTKDTNNNVAFWDVLKACKGEDLGKVEFDEEIKKRF
KQVYVPNWFSVDLKTGMLTITLDESDCFAAWVSAKDAGFSSSDGSDPKLNLGGLLLQALL
EFWPRTHINPMDEEENEVNHAAVNGEQETRVQKGNGYFQVPPHTPVIFGEAGGRTLFRLL
CRDSGGETESMLLNETVPQWVIDITVDKNMPKFNKIPFYLQPHSSSGAKTLKKDRLSASD
MLQVRKVMEHVYEKIINLDTESQTTASSLAANDKPGETEKDEDMALMAEEKIELICQDQV
LDPNMDLRTVKHFIWKSGGDLTLHYRQKST
NT seq 2073 nt   +upstreamnt  +downstreamnt
atgagggttcgactgtcaacatgtaagatggcggcgcaccacagacagaatgccgctggg
cgaaggaaagtacaggtatcttatgtgataagagacgaggcggagaagcacaatcgcaat
ggggtgaatgctcttcagctggaccctgcactgaaccggctcttcacggctggaagagac
tctatcatcaggatatggagtgtcaaccagcataagcaggactcttacatcgcttccatg
gagcaccatacagactgggtcaatgacatcgtcctctgttgcaatggaaagacattgata
tctgcttcatcagacacgacagtgaaagtgtggaacgcacagaaaggattctgcatgtcg
acgttacggactcacaaggactatgtgaaggcattggcatatgctaaagacaaggagctg
gtggcgtcagcagggttagacagacagatcttcctgtgggatgtcaacacactaacagca
ctgactgcctccaacaacactgtcaccacgtcgtccctcagtgggaacaaagactccatc
tacagcttggctatgaaccagatggggacggtcatcgtatctggctccactgaaaaggtc
ctgagagtatgggaccctaggacatgtgctaagctgatgaagctgaaaggccactccgac
aacgtcaagtcactgttgctgaaccgggacggcacacagtgtctgtcaggcagctcagat
ggaaccatcaggttgtggtctctggggcagcagaggtgtatcgctacgtatcgggtccac
gacgagggagtgtgggccctgcaggtgaacgaagccttcacacacatctactctggaggc
agagacaagaagatcttctgcaccgacctgaggaaccctgatatcagagtactcatctgt
gaggagaaggcccctgtactgaagatggaactggacaggacagctgaccctcctcctgtt
atctgggtctctaccaccaagtcatctgttaacaaatggtgtctaaagggaatccacaac
ttccgggcgtctggggattatgacaatgacatcatcgcccccctgaccccgctgtgtaca
gcgcccgaacaggtcatcaaaggaggggccagtataattcagtgtcacattctgaacgac
aagaggcacatcgtcaccaaagacaccaacaacaatgttgcattctgggacgtgctgaaa
gcctgtaagggagaggacctggggaaagtagagtttgatgaagagatcaagaagagattc
aagcaggtctacgtcccaaactggttctctgtcgacctcaagacagggatgctgaccatc
acgctggatgagagtgactgcttcgctgcctgggtgtctgctaaggatgctggcttctca
agctccgatggatcggacccaaagttgaaccttggtggactgctacttcaggccctgcta
gagttctggcccaggacgcacatcaaccccatggatgaggaggagaacgaggtcaaccat
gcagcagtgaatggggagcaggagacgcgggtgcagaaggggaatgggtacttccaggtg
cctccacacactccagtcatcttcggagaggcaggagggaggactctgttccgactgttg
tgtagggactctggtggggagacggagtctatgttactgaatgagacagtcccacagtgg
gtcatagacatcaccgtggacaagaacatgccgaaattcaacaagatcccgttctacctc
caaccccactcttcttctggagccaagacactgaagaaggaccgtctgtctgccagtgac
atgctgcaggtgaggaaggtgatggaacacgtctatgagaagatcattaacctggacact
gagtcccagaccactgcttcctccttggcagccaatgacaagccaggagagacggagaag
gacgaggacatggccctcatggccgaggagaagattgaactgatatgtcaagaccaggtc
ctggacccaaacatggacctgcgaactgtcaagcattttatctggaaaagcggaggggac
ttgacgcttcactataggcagaaatctacgtga

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