Oncorhynchus nerka (sockeye salmon): 115114873
Help
Entry
115114873 CDS
T07952
Name
(RefSeq) trichohyalin-like
KO
K20645
Rho GTPase-activating protein 30
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115114873
Membrane trafficking [BR:
one04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
115114873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
Motif
Other DBs
NCBI-GeneID:
115114873
NCBI-ProteinID:
XP_029499222
LinkDB
All DBs
Position
LG9b:complement(31027346..31036828)
Genome browser
AA seq
1573 aa
AA seq
DB search
MRRLRRKGGNNEKVFGCDLLDHLSTTCQEIPQVLRSCSEFIEEHGVVDGIYRLSGVSSNT
QKLRGEFDSEGTPDLNKDVYLQDIHCVSSVCKAYFRELPNPLLTYQLYDKYAEAVAIQLE
EERLVKIKDVLKELPAPHYKTLEFLMRHLVKMASHSSHTNMHSRNLAIVWAPNLLRSKDI
EASGFNGTAAFMEVRVQSIVVEFILTHVPQLFPDSGITERRKSLPSPSIHNPEEPFFRAI
PFQLGNISPGDGPPAMRSYHAIIDGTDKRKGSLKGRKWKSIFNLGGRLHDPRRRNKNSAK
EKERTVLRPAKSMDSLSSVPYPHEGSRQRPPSTVMSPLAQPSPCTQGGAEGGASSSGGDM
GSGYAVTYRRGQGASVSVVSGGGGTQGIYSRLDSHCGGGNSTEALQPPSRSPGLSSKADR
RAGIHISGPFSVTVPLHITSGLAFGVLQGGGADRGNHRGGQESGDKGEGGEGDRRKGREG
ERQKAREGHRQEAREGDRQEAREGDRQEAREGDRQEAREGDRQEAREGDRQEGGEGERHI
RVEVKRGDKTDLGKRRDEEVTGERRGEAEEDKVEEKWGRGEEEREEEVNGDCVSKPSEES
IEESQVQGEGGEGDAENHVNDEDEEGEYMDMKGSVQTALDAPDMSGVRNEVVAIDLPFPL
MEEDDEQDQDCPLDFQDTFGFLDLMDSSVSSQMFQEFSVEPHHGDDEYEDEVEHRSPGLS
HDRPDPVTRPPVDAQTQIQTQTPIHRPLSIDQYGRANKSMSLPYMSRPFLPALSSSSSEE
EEEEDEEGDDYDKEDEEDDDDMFCKSLPSSLVFNRLTWSGPQTDLENSLSPAPVPSQPLD
GASDDGPIPSSEARIPPEHLDIDYPDCCHQSVEVLRYSKAEEKNSLEAMKLVEEEDAEQD
RGSQEKNQADTLTNTCTESTDIEESCHLVETSIMEEEETPDDIEKSHASASASTDCEETS
LQTTRVHLKLKDEEEVLKSQCAEEGVISEGYNGDTVSEAEAENPQEHLLTACLIVSCAEE
PENIVNEQSEEVSRDSAGDVKEHPEKSAKRERAGEEKKVEEVMEERDDRNGGGWDKQEGE
ETACESEGDMGKREEREVLKELEKTEENYVGVRVGVEEKEQGGMIEEEDDRIAGDEREVG
EEDTKQEEVIYEEMMSIVVRDDMMESGERKDREGETEGSTFIEEVIETKEDGEMIGVQQK
EIMKEIDESKASEEMSAKEEAKKAVEGVDPMGETKEEAAEGVDTMGETEEEAAEERVEGV
DTMGETAEEAAEERVEGVDTMGETEEEAAEERVEKMSIDNEKQDLEAQHVLERRQRDIDL
IKDVVGEGYEEGEKEMEVGDVIWEEEGDSIRVVQRETDEKKKKKGETEDQLKTPTIEERE
EELKEIQINNNKKYEGENEAMDSKVGSEKGVGRVLVVSKQQTPPKVYQARSVPVVPPKPH
HCRITALNLRQQQHQRERRETDRDSGKGKVHRTLGQQDKERKMEGKPEHDKVSETERGWN
EDGEDEGTGKKEAQSGGVRERRRDVDEGGVKDMMKNSPVSMCFDEAVAMGIKRGREKEGS
ERGKKKERGYEVQ
NT seq
4722 nt
NT seq
+upstream
nt +downstream
nt
atgcggagactccggagaaaaggagggaacaatgagaaggtgtttggctgtgacctgttg
gaccacttgtccactacctgtcaggagattccccaggtgctgcgaagctgcagtgaattc
attgaggagcatggggtggtagatgggatctacaggctatctggggtgtcatccaacaca
cagaaactaaggggtgagtttgacagtgaggggaccccggatctcaataaggatgtgtac
ctgcaggacattcactgtgtcagctctgtctgcaaggcctacttcagagagttacccaat
cccctcctcacataccagctctatgacaaatatgctgaagctgtggcgattcagttggag
gaggagaggctggttaagattaaggatgttctgaaagagttacccgctccccattacaaa
actctggagttcctgatgcgccacctggtcaagatggcttctcactcctcacacaccaat
atgcattcccggaacctcgccattgtttgggctccgaaccttctcaggtcaaaggacatt
gaggcgtcagggtttaacggcacagcagcctttatggaggtgagggtccagtctatcgtg
gtggaattcatcctcacccacgtgccccagctgtttcctgattcaggtattacggagcgc
cggaagtcactcccatctccctctatacacaatccagaggaacctttcttccgggccatt
ccattccagttaggcaacatcagcccaggggacggtccccctgccatgcgttcctaccac
gccatcatagacgggacagacaagaggaagggatctcttaagggcaggaagtggaagtcc
atcttcaatttaggaggcagactccatgacccgagacggaggaacaagaactcggccaaa
gaaaaagagagaactgtcttgaggccagcgaagagcatggattccctgagctctgtgccc
tatccgcatgaaggttccagacaacgacccccttccactgtgatgtcccccttggctcag
ccctctccctgtacccaggggggtgcggagggaggggcatcgagtagtggtggtgatatg
ggcagcgggtatgctgtgacctaccggaggggtcagggcgctagtgtgagtgtagtgagc
gggggcgggggaacacaaggcatatacagtcgactggacagtcactgtggtgggggcaac
agcactgaggctctgcaacccccatccagatccccaggactctccagcaaagccgaccgg
cgggcagggatccacatctccggacctttctcggtcacagtaccccttcacatcacatca
ggcctggcctttggggtgctacaggggggtggagcggacaggggcaaccatagaggagga
caggagagtggagataaaggagagggcggggagggtgacagacggaagggaagggagggg
gagagacagaaggcaagggagggtcacagacaggaggcaagggagggtgacagacaggag
gcaagggagggtgacagacaggaggcaagggagggtgacagacaggaggcaagggagggt
gacagacaggaggcaagggagggtgacagacaggagggaggggaaggggaaaggcacatc
cgagtagaagttaagaggggggacaagactgacctaggcaagagaagagatgaagaggta
acaggagagaggagaggtgaggcagaggaagataaagttgaagaaaaatggggaagagga
gaagaggagagagaagaggaagtgaatggggactgtgtatctaagccatcagaagagagc
attgaagagagtcaggttcagggtgagggtggagaaggggatgcagaaaaccatgtcaac
gatgaggatgaagagggagaatacatggatatgaaaggctctgtgcagactgccctggat
gccccagatatgtcaggtgtcagaaatgaagtagttgccatagatttgccgtttcctctg
atggaggaggacgatgaacaagaccaggactgtccactggactttcaggatacttttgga
ttccttgaccttatggacagcagtgtctccagccagatgttccaagagttctcagtggag
cctcatcatggggatgatgagtatgaagacgaggtggagcatagatccccaggactctca
catgacagaccagaccctgtcacacggccacctgtagacgcacagacacaaatacagaca
caaacgcccatacacaggcctctaagcatagatcagtatgggcgagccaacaagtcaatg
agtctgccttacatgtcccggcccttcctgcctgctctgtcttcctcctcctctgaagaa
gaagaagaggaggatgaagaaggtgatgattatgacaaagaagatgaggaggatgatgat
gacatgttctgtaaaagtctaccatctagtttggtgttcaacagactgacatggagtgga
cctcagactgacttggagaacagtttgtccccagcccctgtgccctcacaaccactggac
ggtgcctctgatgacggaccaattcctagttctgaggccagaattccccctgagcacttg
gacattgattaccctgactgctgtcaccaatcagtggaggttttgaggtatagcaaagct
gaagaaaagaatagtctggaagcgatgaaactggtggaggaggaggatgcagaacaggat
cgaggcagccaggagaaaaaccaggcagacaccctgaccaatacttgcacagaaagcact
gacatagaagaaagttgtcacttggttgaaaccagcatcatggaggaagaggaaactcca
gatgacattgagaagagccacgcttcagcatccgcatcaactgactgtgaggagacctca
ctgcagaccactagagttcatctgaagctcaaagacgaggaagaggtcctgaagagtcaa
tgtgctgaagaaggtgtgatttcagagggttataatggtgatacagtgagcgaagccgag
gcagaaaacccacaagagcatttactcacggcctgtcttattgtttcctgtgctgaagag
ccagagaacatagtcaatgagcaatcagaggaggtttctagagattcagctggggatgta
aaagagcatcctgaaaaaagtgctaagagggagagagctggagaggagaagaaggtagag
gaagtgatggaggaaagagatgatagaaacgggggaggatgggacaaacaagagggagaa
gaaacagcatgtgagagcgagggagatatgggcaaaagagaggagagagaggtattaaag
gaattggaaaaaacagaagaaaattatgtgggggttagggtgggagtggaggagaaggaa
caaggaggaatgattgaagaagaggatgacaggatagcaggtgatgaaagggaagtagga
gaagaggacacaaagcaggaagaggtcatttatgaagagatgatgagcatagtagtgagg
gatgacatgatggaaagtggagagaggaaggatagggaaggagagactgagggaagtaca
tttatagaggaggtgatagaaaccaaagaagatggagagatgattggagtacaacagaaa
gagatcatgaaagagatagatgagagtaaggcaagtgaagagatgagtgcaaaagaagag
gcgaagaaagcggtggaaggagtggatcccatgggagagactaaggaagaggcagctgaa
ggagtggataccatgggagagactgaggaagaggcagctgaagagagggtggaaggtgtg
gataccatgggagagactgcggaagaggcagctgaagagagggtggaaggtgtggatacc
atgggagagactgaggaagaggcagctgaagagagggtagaaaagatgtcgattgataat
gagaaacaggatctagaggcacagcacgttttagagagaagacaaagagatatagatctt
ataaaggatgttgtgggagagggatatgaggagggagagaaagagatggaagtgggagat
gtaatctgggaggaagaaggagatagtatacgtgtggtccaacgggagacagatgagaag
aagaagaagaaaggagagacggaagatcaactaaagacaccaacaatagaggaaagagaa
gaagaactgaaagagatccagataaacaacaacaaaaaatatgagggagaaaacgaagcg
atggatagtaaagtggggtctgaaaaaggggtggggagagtgctggtcgtgtctaaacaa
caaacaccccctaaagtgtatcaagcaagatcagtgccagtggtaccacccaagccccat
cactgccgaataactgcactgaacctcagacaacagcagcaccagagggagaggagagag
acagacagagacagtggaaagggaaaggtacacaggactttgggacagcaagataaggag
agaaagatggaaggaaagccagagcatgacaaagtcagcgagacagaacgagggtggaat
gaggatggggaagatgagggcacaggcaaaaaggaggcacagagtgggggggtgagggag
aggaggagagatgtggatgaggggggagtgaaagacatgatgaagaacagtccagtcagt
atgtgttttgatgaagctgttgccatgggaatcaagagagggagagagaaagagggcagt
gaaagggggaaaaaaaaagagagaggatatgaagtacaataa
DBGET
integrated database retrieval system