Oncorhynchus nerka (sockeye salmon): 115115039
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Entry
115115039 CDS
T07952
Name
(RefSeq) chondroitin sulfate proteoglycan 4-like
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
one00535
]
115115039
04091 Lectins [BR:
one04091
]
115115039
Proteoglycans [BR:
one00535
]
Cell surface proteoglycans
Others
115115039
Lectins [BR:
one04091
]
C-Type lectins
Others
115115039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
PITM1-3
Motif
Other DBs
NCBI-GeneID:
115115039
NCBI-ProteinID:
XP_029499366
LinkDB
All DBs
Position
Unknown
AA seq
1265 aa
AA seq
DB search
VKLDLGSGECLLRSESSTQLNDLAWHTAELLHDRHNVTLTVDQHSHTSLRMPGHGSQKQE
LSIQEGLYIGGSVGLDKLYLPSDLTGFRGCMDEAVFNEHDMLSSLRPYTGFKRVYEVYLG
CSPQFFANEEDPVSFFSSRAYVSLPPWNVSHVQQEALFECVVHTSAKEGIILYNSARQGG
FVAVEIQEGLPVALVGKGGTKTELRSLTFVNDRNWHSIKLFFSPKTLQLTVDKETVKTSI
SSRSKGLQLRGSVFVGGIDDSTRTEVRKMGLVSVSGKRVRGGSFKGCLKDMKVNGMKMGL
PNAAVTKDISVGCGPEKEPEPSTTMSPMTLPTVPKSHFDPTSVTPTPEFPMSTLDRGLDK
RYGMNFVLLRNLVVPEGGRGSLESKHIKVLLDFKKLRIRQSQIMFRIQEQPVLGQIRLDV
DQDQEENTFSMLDLWYGKVMYIHGGSENPEDFFTFSIFSSSRKEVPDYLKGTRRYRYNIT
VMPTNDAPELSLPQGNLFILLDNSRKHLTTEVLKATDIDSNHSNLIFSVLGNLNTDAGYL
EVEDNPGVAVTTFSHSDLNQGKVNYVHTGARNSRIVLRVSDGDKVSNTVVLRIMAIGLEY
KIGNNTGLEIIQGEVSVISNKHLAVQTNAVKQVVDIRYDVVEPPQYGDLQRLHSSGEWKP
TGSFSQRLLEKERLRYLSTFQEIQTANATDYFKCKVTVAGRVDTELVFPITVKWVHYNLV
RNVMADIDKVRKVTLDSQYLYATVDMVTLSEDDLHFRVLSSPKKGQLLLVNELLKKNSTF
SQRNVTDLKVRYELVDRPYEDTSDTFKFHVFSKHAQTQSYNFQISIKADVNSIFIRNDGL
LIKEGESKLITKAELFAETLSTKVMYYTVTSSPKHGKLQRINLSNSNTSYNSIQTFSNQD
LMEERVMFIHDDTETTQDQFTFIASTSQESKSSVTDDEVGSKEGTFNISIQLVNDEKPVR
VVDKVFHVVRDRQRLLTLDDLCYHDADSDFSDGQLVYTRRGIPMGDLVLVNDTSHRLFQF
TQKELEEKRVLFLHRGVSSGRFVLFVSDRKHFVSTLLDVTAEDPFLRLGNNTGLLVQKGK
EVTLTTGNFSVLTNLDIRDDSEVTYKVSEPPRNGGLYRHGNISMKSFTQRDLKKGLVSYR
HDDRKDPGDSFNVTVKVKGTYLNARVNVKVYLDSHQRPPILQHNHTLLVEESKPVKIDQS
RLEVIHEDNMPSEIVFTVKVAPLHGFIRRFVEAEDVGTGQTPVQTFSQEDVNAGNIQYMQ
TAPGQ
NT seq
3795 nt
NT seq
+upstream
nt +downstream
nt
gtgaagctggacttgggatccggtgagtgtttgctacggtctgaaagtagcacccagcta
aacgacctggcctggcacactgctgagctcctccacgaccgccacaatgttaccctgacc
gtggaccagcactcccacaccagcctcaggatgccagggcatgggtctcagaaacaggag
ctgagcatccaggaagggctgtatatcggcggctctgtaggcctggacaagctctacctc
cccagtgacctgactggtttccgggggtgtatggacgaggctgtcttcaacgagcacgat
atgttatcgtcgttgagaccttacacaggattcaagagagtctatgaggtttatttgggc
tgtagtccccagttcttcgctaacgaggaggaccctgttagtttctttagttctagagcg
tatgtctccctgccaccctggaacgtctcccacgtccagcaggaggctctgtttgagtgt
gtggttcacacctcagctaaagaggggatcatcctgtataactcggccagacaggggggc
tttgtggcagttgagatccaagaggggttgcctgtagcccttgtgggtaaaggaggcacc
aaaacagaacttcgctcccttaccttcgtcaatgacaggaactggcattcaatcaaactg
ttcttcagccccaagaccctccagctgacagtggacaaggagacagtaaagactagcatc
agctctcgctccaagggactacagctgaggggttctgtctttgttgggggcattgacgac
agcacgcgcacagaagtccggaagatgggtctggtgtctgtgtcagggaagagggtcaga
ggaggctcgttcaagggctgtctgaaggacatgaaagtcaacgggatgaagatgggtctg
cccaatgctgctgtcacgaaagatatctctgtgggctgcgggccagagaaagaaccagag
ccctcgaccacgatgagtccaatgactcttccgactgtccccaagtcccacttcgatccc
acttccgtcacccccacaccagaattccccatgtccactctggacagggggctggacaag
aggtacgggatgaacttcgtgctgctcaggaaccttgtggtcccggagggaggacgtgga
tctctggaatccaaacacatcaaggttctcctggacttcaagaagctcagaatacggcag
tcccagatcatgttccggatccaagagcagccggtactcggtcagatcagactggatgta
gaccaagaccaagaggagaacaccttcagcatgctggacctgtggtacggcaaggtgatg
tacatccacggaggatcagagaacccagaagacttcttcaccttctctatcttctccagc
agcaggaaggaggttcctgactacctcaaaggaaccaggaggtatcgctacaacatcaca
gtgatgcccaccaacgacgccccagagctcagcctgccccaggggaaccttttcattctg
ttggataactctagaaaacacctgaccacggaggtgttgaaggccacagacatcgacagc
aaccacagcaacctaatcttctccgtcctggggaatctgaacactgacgcaggttacctg
gaggtggaagacaaccccggtgttgcagtgaccacgttctcccattctgacctaaatcaa
gggaaggtgaactatgtccacactggtgcgaggaactccaggatcgtcctgagggtcagt
gatggagacaaggtgagcaatacggttgtgcttaggatcatggccatagggttggagtat
aagatcggcaacaacaccgggcttgagataattcagggtgaggtgtctgtgatcagtaac
aagcacctggccgttcagaccaatgctgtgaagcaggtggtggacatccgatatgatgtt
gtcgagccccctcagtatggtgacctgcagaggcttcattccagcggagaatggaagccg
actggttccttctcccaaaggctactggagaaagaacgccttcggtacctcagcactttc
caagaaatccagacagcaaatgctacggattacttcaaatgcaaggtcactgtagctggc
agggtcgatactgaactggtctttcccatcactgtgaagtgggtacattataacctagta
aggaacgtaatggccgacattgataaagttcggaaagtgacgttggactcgcagtatctt
tatgccacggtggacatggtgacactatccgaggatgatctgcacttccgagttctttcc
tcgccgaagaaaggacaacttctgctcgttaacgagttactgaagaaaaactcaacattc
agccaaaggaatgtcactgatctaaaggtacgatacgaactggtcgacagaccgtacgaa
gacacgagcgacacttttaaattccatgtgttctccaaacacgctcaaacgcaaagttac
aatttccagatctcaataaaagccgatgtcaatagcatatttataagaaatgatggactt
ctgattaaggagggagagagtaaactcatcacaaaggccgagttgtttgcagagacactc
agcaccaaggtgatgtactacactgtcacaagtagccccaaacacgggaagctgcaacgc
atcaacctgtccaactccaacaccagttacaacagcatccaaacgttcagcaatcaggat
ctcatggaggagcgcgtcatgttcattcacgacgacacagagaccactcaggaccagttc
acattcatagcctccactagtcaggagtccaaatcctccgtcacggacgatgaggtcggc
tctaaagaagggacgttcaacatctccatccagttagttaatgacgagaagccagtgcgc
gttgtcgataaagttttccatgtggtgagggatcggcagcggttgctcaccctggacgat
ctatgttaccatgacgcagactcggacttcagcgatgggcagttggtctacacgcgacgg
ggaatcccgatgggagacctggttctggtgaacgacacctctcacaggctgttccagttc
acccagaaggagctggaagagaagagagttctgttcctccatcgaggcgtgagctctgga
cgcttcgtgctcttcgtgtccgacaggaaacactttgtctccactctgctagacgtcact
gccgaagaccctttcctaagactcggcaacaacacaggtctgttagtccagaagggaaag
gaagtgaccctaaccacaggtaacttcagcgtgctcacgaacctcgacatccgagacgac
agcgaggtcacatacaaggtgtccgagccgcctaggaacggcgggctgtatcgccacggc
aacatctccatgaagtcattcacccagcgcgacctgaagaagggccttgtttcgtatcgc
catgacgacagaaaggacccgggggactctttcaacgtgacggtgaaggttaaaggcact
tatctgaacgccagagtcaacgttaaggtttacctggacagccatcagaggccccctatc
ctccagcacaaccacactttactggtggaggagagcaagcctgtgaagattgaccagagt
agactggaggtcatccacgaggacaacatgccgtctgagattgtattcacagtgaaggtg
gccccgctacacgggttcatccggcgcttcgtggaggctgaggacgttggaacaggacag
acccccgtccaaaccttctcccaggaagacgtaaacgctggcaacatccagtacatgcag
acagcccccggccag
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