Oncorhynchus nerka (sockeye salmon): 115115091
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Entry
115115091 CDS
T07952
Name
(RefSeq) PR domain zinc finger protein 13-like
KO
K24645
PR domain zinc finger protein 13 [EC:2.1.1.-]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115115091
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
115115091
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
PRDM2_PR
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_7th_ZNF462
zf-BED
zf-C2H2_15
Zf-C2H2_ZNF451
C2CH-3rd_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
115115091
NCBI-ProteinID:
XP_029499428
LinkDB
All DBs
Position
LG3:complement(20601869..20608389)
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AA seq
631 aa
AA seq
DB search
MVLKPLHGEPAMQATRASAISVFADCSIPAGLRIGPVPGVFKLGKYVTDRKEVVTKRKIR
LLRGEIVDESGCPVPDWIGCIRAARNSQEQNLEAVSDLPSGQIFYRVLTEIPAGEELSVW
YSNTLAQWYDIPTTATPTHDEKGEERYICWYCWRIFKYPNTLKAHVHFHCALSNGRSFVN
SEQARSTDSFSRSPKSGDIPYTSASPRNGHNTSISDSVRRTVSSSPFLNKVGVSKKPSSE
EQDRALDMSVTSARNHGHLMGLGATSSMLSNMGFHPGVRSAFKPMGQSKVPTAEVYREET
NGKHNGLGFSKLMGNMKSTRALNEPLIGSHPSKCVHPLDSTSPVVPCANTIRGFPLIPNF
EETSAFKHVESRMHSGLSPSRYSHMSSGFHFERFSLPQFDGVKPYNGDCNIPLMPFTVYN
GELLYSSPYYPLKFHLSNLLKYPETMSYFGAPALNQDLGSITNIDREIAMHTQQLSEIAV
EKNRTRLDSMPTANTGSGKPKKGHLCLYCGKLYSRKYGLKIHMRTHTGYKPLKCKVCFRP
FGDPSNLNKHIRLHAEGNTPYRCEFCGKVLVRRRDLERHVKSRHPGQTIKKAEDKTEGIF
EDQEQKSDNDSDVDVCFTDDQSDQESSKIDD
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggttctcaaaccactgcacggagagccagccatgcaagcaactcgggcatccgctatc
agtgtgtttgcagactgcagcatcccggccggcctgcggataggaccggtgcctggcgtc
ttcaaactagggaaatacgttactgatcgcaaagaagtcgtaaccaagagaaagattcgg
ctgctgaggggcgaaatcgtggatgaatcaggttgccctgtgccagactggattgggtgt
atccgggcggccagaaacagtcaagaacagaacttggaggctgtctcagatctacctagt
gggcagattttctatcgtgtgctgacggagatcccagcaggcgaggagctgagtgtgtgg
tactccaacactctggctcagtggtacgacatccctaccactgccactccaacacacgac
gaaaaaggtgaagaacgctacatttgctggtactgctggagaatatttaaatatcccaac
acactgaaggcccacgtccatttccactgcgctctgagcaacgggcggagctttgtgaac
agcgagcaggccaggagcacagacagcttcagcaggtcacccaaatccggggacattccc
tacacctccgcctcgcccaggaacggccacaacacctccatatcagactctgtcagacgg
accgtgtcttcctcacctttcctcaacaaagttggcgtatcaaagaaacccagctctgag
gagcaggacagagcacttgacatgagcgttacctcggccagaaaccacggacatctcatg
ggccttggcgcaacgtcttcaatgttgagcaacatggggttccacccaggcgtgcgctct
gcattcaagcccatgggccaatccaaggtccccacggctgaagtctacagagaggaaact
aatgggaagcataatggactaggcttcagcaaactcatggggaacatgaaatcaacgcga
gccttgaatgaacctttgatcggaagccatccctccaagtgcgtccatccattagattct
acatctcccgtggtcccgtgcgcaaacaccatcaggggttttccgttaatacctaatttt
gaggagacatcggctttcaagcacgtggagagccgaatgcactctggactgtccccctcg
cgctactctcacatgtcctctggattccattttgagaggttttctctgcctcagtttgat
ggcgtcaagccatataatggagattgcaatatccccctcatgccattcaccgtgtacaat
ggcgagctgctttatagttcaccatactacccactgaaattccatttgagcaatctccta
aaatacccggagacaatgtcctactttggcgcacctgcactcaaccaagacctgggttca
attaccaacattgacagggagatagccatgcacactcaacagttgtctgaaatagccgtt
gaaaagaaccgaaccaggctcgactctatgcccactgctaacacaggctcagggaagccc
aaaaagggacacttatgtctttactgtggtaaactgtactctcggaaatacggactcaag
attcacatgagaactcacacagggtacaaaccgttgaagtgcaaagtttgttttcggccc
ttcggtgaccccagcaacctgaataagcacatccgtctgcacgcggaagggaataccccg
tacaggtgcgaattctgtggcaaggtgctggtgcgccggagggatttggagcgtcatgtc
aaatcaaggcaccctggacaaacaatcaaaaaagctgaggacaaaaccgagggcatattc
gaggatcaagagcaaaagagcgacaatgacagcgacgttgatgtatgcttcaccgatgat
cagagcgaccaagaatccagtaaaatagatgattaa
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