Oncorhynchus nerka (sockeye salmon): 115115160
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Entry
115115160 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: histone-binding protein RBBP7-like
KO
K10752
histone-binding protein RBBP4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03082
ATP-dependent chromatin remodeling
one03083
Polycomb repressive complex
one04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115115160
03083 Polycomb repressive complex
115115160
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
115115160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115115160
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
115115160
Histone modification proteins
HAT complexes
HATB complex
115115160
HDAC complexes
Sin3A-HDAC complex
115115160
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
115115160
PRC2.2
115115160
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
115115160
Heterochromatin formation proteins
Other heterochromatin formation proteins
115115160
Chromatin remodeling factors
NuRD complex
115115160
NuRF complex
115115160
NuRF complex (fruit fly)
115115160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
ANAPC4_WD40
Beta-prop_RIG_1st
eIF2A
WD40_MABP1-WDR62_1st
Beta-prop_SPT8
Beta-prop_IFT140_1st
MIOS_WD40
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
115115160
NCBI-ProteinID:
XP_029499509
LinkDB
All DBs
Position
Unknown
AA seq
426 aa
AA seq
DB search
MADKEVYDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTVQWLPDVNRPDGKDY
AVHRLVLGTHTSDEQNHLVIASVQVPNDDAQFDASHYDSEKGAEFGGFGSVSGKIEIEIK
INHEGEVNRARYMPQNPCIIATKTPTSDVLVFDYTKHPSKPDPSGECSPDLRLRGHQKEG
YGLSWNPNLSGNLLSASDDHTICLWDIGAGPKEGKIVDAKTIFTGHTAVVEDVSWHLLHE
SLFGSVADDQKLMIWDTRSNNTSKPSHAVDAHTAEVNCLSFNPYSEFILATGSADKTVAL
WDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSAEDAE
DGPPELLFIHGGHTAKISDFTWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPDTPASE
LEGQGS
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaagaagtgtacgacgatgcagttgaggagcgggtgatcaatgaagaatac
aaaatctggaagaagaatactcctttcctctatgacctggtgatgacccacgcgctggag
tggcccagtctcactgtgcagtggctacctgacgtcaacaggccggatggaaaggactat
gcggtccacagactggtactgggaactcacacgtcagatgagcagaatcacctggtgatc
gccagcgtacaggtccccaacgatgacgcccagtttgatgcttcccactacgacagtgaa
aaaggagcagaatttggaggttttggatccgtgagtggaaagatagagattgagatcaag
ataaaccacgagggtgaagtgaaccgggccaggtacatgcctcagaacccctgcatcatt
gctaccaagacccccacctcagacgtactggtctttgactacaccaagcacccttccaaa
ccagaccccagtggtgagtgcagcccagacctgcgcctgcggggccaccagaaggagggc
tacggcctgtcctggaaccccaacctcagtggcaacctgctcagtgcttctgatgaccac
acgatctgcctgtgggacatcggtgctggtcctaaggaggggaagatagtggatgctaag
accatcttcaccggtcacactgcagtggtggaggacgtgtcctggcacctgctccacgaa
tcactgtttggctctgtggccgacgaccagaaactgatgatctgggacacacggtccaac
aacacgtccaagcccagccatgcagtggatgcccacactgcagaggtcaactgtctgtcc
ttcaacccctacagcgagttcatcctggccaccggctctgcagacaagactgttgctctc
tgggatctgcgtaacctcaaattgaagctccactcgtttgaatcgcacaaggatgaaatc
ttccaggtgcaatggtcccctcacaacgaaaccattctggcttccagtggaacagatagg
aggctcaacgtatgggatctcagtaaaatcggagaggaacagtctgctgaagatgcagag
gacggacctccagaactcctgttcatccatggaggacacacagcgaagatttctgatttc
acatggaaccccaacgagccatgggtcatctgctccgtctccgaggacaacatcatgcag
gtttggcaaatggctgagaacatctataatgatgaggagcctgacacccctgcttcagag
ctggagggtcaagggtcgtaa
DBGET
integrated database retrieval system
