Oncorhynchus nerka (sockeye salmon): 115115254
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Entry
115115254 CDS
T07952
Name
(RefSeq) chondroitin sulfate synthase 1-like
KO
K13499
chondroitin sulfate synthase [EC:
2.4.1.175
2.4.1.226
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
one01100
Metabolic pathways
Module
one_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
115115254
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
one01003
]
115115254
Enzymes [BR:
one01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
115115254
2.4.1.226 N-acetylgalactosaminyl-proteoglycan 3-beta-glucuronosyltransferase
115115254
Glycosyltransferases [BR:
one01003
]
Glycan extension
O-Glycan
115115254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
Motif
Other DBs
NCBI-GeneID:
115115254
NCBI-ProteinID:
XP_029499610
LinkDB
All DBs
Position
Unknown
AA seq
544 aa
AA seq
DB search
YNLSRCLPLFSPQMQQLFYENYEPNKKGYIRDLHNSKIHRAITLHPNKNPPYQYRLHSYM
LSRKIAQLRHRTVQLHREIVQMCRYGAAEPSREDLQLGMPPSFMRFHPRLREEVLEWEFL
TGKYLFSSSDGQPPRRGMDSSQHLALDDIIMQVMEMINANAKTRGRVIDFKEIQYGYRRV
NPMYGAEYVLDLLLLYKKHKGKTMTVPVRRHAYLQQTFSQIQFREEEEMDDKALASSINQ
DSDSLSFLSNSLKMFVPFKLSSSSQDQKEPKEPKVNILVPLSGRYDIFVRFMTNLERVCL
IPNQNVKLLILLFSTDNNTERVKQVELMREYHIKYPRAEMEIQPVSGSFSRALALEVGSA
HFSNDSLLFYCDVDLLFTTDFLKRCRSNTVLGEQTYFPIIFSQYDPKVVYAGKVPSENHY
VFTAKTGLWRHYGFGIVCVYKGDLVGAGGFDTSIQGWGLEDVDLFNKFVQSGIRLFRSTD
PGIIHVHHPVVCDPNLEPNQYKMCLGSKASSHGSTQQLAELWLEKNDHGFRKVGSSNNES
LRTA
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
tataacctcagccgttgtctccctctcttctctccccagatgcagcagctgttctatgag
aactacgagcccaacaagaagggatacatccgcgacctccacaatagcaagatccaccgg
gccatcaccctgcaccccaacaagaacccgccctatcagtaccgcctgcacagctacatg
ctcagccgcaagatcgcccagctccgccaccgcaccgtccagctccaccgtgagatcgtc
cagatgtgccgctacggggcagccgagcccagccgagaggacctgcagctgggcatgcct
ccatccttcatgaggttccaccctcggctccgcgaggaggtcctggagtgggagttcctg
acgggcaagtacctgttctcctcgtctgacggccaacccccccgccggggaatggactcc
tcccagcatctggccctggatgacatcatcatgcaggtgatggagatgattaacgccaac
gccaagacgcggggacgagtgatcgacttcaaggagatccagtacggctaccggcgggtc
aaccccatgtacggggcggagtacgtgctggacctgttgctcctctacaagaagcacaaa
gggaagaccatgacggtgccggtgaggagacatgcctacctccagcagaccttcagccag
atccagttcagagaggaagaggagatggacgacaaggctctcgccagcagcatcaaccag
gactctgactccctgtccttcctctccaactccctcaagatgttcgtgcccttcaagctg
tccagctctagccaggaccagaaggagccgaaggagcctaaggtcaacatactggtgccg
ctatccggacgctacgacatctttgtccgcttcatgaccaatttagaacgggtgtgcctg
atccccaaccagaacgtcaagctgctcatcctcctcttcagcaccgacaacaacacagag
cgggtcaagcaggtggagctgatgagggagtaccacatcaagtacccccgtgccgagatg
gagatccagcccgtgtcgggctccttctcccgggccttggctctggaggtgggctcggcc
cacttctccaacgactcgctgctcttctattgcgacgtggacctgctcttcacaaccgac
ttcctcaagaggtgccggagtaacacggtcctgggggagcagacctacttccccatcatc
ttcagtcagtacgaccccaaggtggtttatgccggtaaggtgcccagtgagaaccactat
gtgttcaccgccaagacgggtctgtggcgtcactacggcttcggcattgtctgtgtttac
aagggcgacctggtcggggccgggggcttcgacacctccatccaagggtggggtttggag
gacgtggacctctttaacaagtttgtccaatcagggatccggttgttccggagcacggac
ccggggatcatacacgttcaccatccagtagtgtgcgaccccaacctggagcccaaccag
tacaagatgtgcctgggctccaaagcctcgtcgcacggctcgacacagcagctggctgaa
ctgtggctcgagaagaacgaccacggcttccggaaggtcgggagctcaaataacgaatcc
ctcaggacagcgtga
DBGET
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