Oncorhynchus nerka (sockeye salmon): 115115568
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Entry
115115568 CDS
T07952
Name
(RefSeq) POU domain, class 2, transcription factor 1-like isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
one00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115115568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115115568
03021 Transcription machinery [BR:
one03021
]
115115568
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
115115568
Transcription machinery [BR:
one03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
115115568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
DUF3839
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
115115568
NCBI-ProteinID:
XP_029499946
LinkDB
All DBs
Position
LG1:20646875..20667857
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AA seq
745 aa
AA seq
DB search
MSNPSETSKCAMESQSGDGNTGVQTNGLDIQRQTVQTTNAITNAHAQALLQQSKSEDSGA
IPTSVQQGVLPQAQLMLAGGQIAGLTLSPAQQQMFLQQAQAQLLAAAMQQQSASQQSSTT
GASISASAATPITQLPLSQPVQITSIPSVSTHLPGQLSQLGYPYEMATFSSYLPQLQQLQ
QQNLTMPQFVLVQPGHHIATQLQPGQFIISQTPQSQQSMYTTQSFLQAHNLLTQLPQNQA
NLLQTQPSINLASQPATPSHTIAATPIQPLSHSQTPPKRLDTPSLEEPSDLEELEQFAKT
FKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAV
CAENLSSDLALSSPCGLGSPGLGMEGLNRRRKKRTSIETNIRVALEKSFLEQNQKPTSEE
ITIIADQLNMEKEVIRVWFCNRRQKEKRINPPSSGHSITGTGSTPIKTIFTPNSPLVAST
ASLVTSNTPTTLTLNPVMPLTSTSVSGLTLTGTTIGATTNTASVISTAPMVTAVTNSTSL
SPSPTALQATAAKTDGTQEHTVVMQAPSSLATNLGTGQVMVAGPGLSAALQGAAQLPTSS
SYASMAGLNPGLMASSQFTPGGALLSLAPGGLGGAINPAMLSNSTLATIQGLWSALASGG
TLPITSLDGSGNLLFANTSAGSTPNLVQPLFLNPQNLSLLTSNPVSLVSAGAAGGGALQV
TANHQVTTATVPVPASTITTASKAQ
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatccatcagaaactagtaaatgtgcaatggagagtcagagtggggacggaaac
acaggagtccaaacgaatggactggacattcagaggcagacggtgcagaccacaaatgca
atcaccaatgcacatgcacaggctctgctccaacagtccaagtctgaagactcgggtgca
attccgacctccgtccagcagggggtgctgcctcaggcccagctcatgctggctggggga
cagatagctggattgaccctgtctccagcgcagcagcagatgtttttgcagcaggcccag
gcccagctcttggcagcagccatgcagcagcaatcagccagccagcagagcagcaccacg
ggggccagcatctctgcctccgcagccacccccatcacacagctgcccctgtcccagccc
gtccagatcacctctattccctctgtctctactcatctcccaggccagctaagccagctg
ggatacccgtatgagatggcgaccttcagcagttacctacctcagttacagcagctgcag
cagcagaacctaaccatgcctcagtttgtcctggttcaacctggccaccacatcgccacc
cagctgcagcctggtcagttcatcatctcacagacgccgcagagccagcagagtatgtac
acaacgcagagtttcctgcaagcccataatcttctaactcaactacctcaaaaccaagcc
aacctcctgcagactcagccaagtatcaaccttgcctcacagccagcgactccgtcccac
acgatagcagccacgcccatccagcccctgtcccacagtcagaccccgcccaaacgcctg
gacacacccagtctggaggagcccagcgacctggaggagcttgaacagttcgctaagacc
ttcaaacagagacgcatcaaactgggcttcacacagggggatgttggcctggccatgggc
aagctgtatggtaacgacttcagccagaccaccatttcccgcttcgaggccttgaacctc
agctttaagaacatgtgcaagctgaagccacttctggagaagtggctcaacgatgcagtt
tgtgcagagaatctgtcgtctgacctggccctgtccagcccttgcggcctggggtccccc
ggtctgggcatggaggggctcaaccgccgacgcaagaagaggaccagcatcgagaccaac
atccgcgtggccttagaaaagagctttctggagcagaaccaaaaacctacctctgaggag
atcaccataattgctgaccagctcaacatggagaaggaggtgatccgggtgtggttctgt
aaccgtcggcaaaaagagaagcggatcaacccccccagcagcggacacagcatcacaggg
acaggcagcacccccatcaaaaccatcttcacccccaatagccccttggtggccagtacg
gcgagccttgtgaccagtaacacaccaaccacactcactttaaacccagtgatgcctctc
accagcaccagcgtctccggtctgaccttgacaggcacgacgatcggagcgaccacaaac
acggcatctgtcatctctacggcacccatggttaccgcggtgaccaactccacctcgcta
agcccctcccccacggccctccaggccacggcagcgaagacggatggaacccaggagcac
acggtggtcatgcaggcgccatcgtcactagcaaccaatctggggacaggtcaggtgatg
gtggctggaccggggctgtcagcggccctgcaaggagctgcccagttacccaccagttct
agttacgcctccatggctggccttaacccaggactgatggcatcctcacagttcactcct
gggggggccttgctgagcttagctccgggtgggcttggaggggctataaaccccgccatg
ttgagcaacagcaccctggccaccatccaaggtctatggagcgctctggcatcgggtggc
actctccccatcacctcgctggacgggagtggtaacctgctgttcgctaacacctcggcc
ggcagcacccccaacctggtgcagcccctcttcctgaacccccagaacctgtccctgctc
accagcaaccccgtcagcctggtgtcggccggagccgccgggggaggggccctgcaggtc
acagccaaccaccaggtcaccacggcgaccgtcccagtgcccgcctccaccatcaccact
gcctccaaggcccagtga
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