Oncorhynchus nerka (sockeye salmon): 115115620
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Entry
115115620 CDS
T07952
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04120
Ubiquitin mediated proteolysis
one04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115115620
04120 Ubiquitin mediated proteolysis
115115620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115115620
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115115620
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115115620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
FANCL_C
zf-Nse
Motif
Other DBs
NCBI-GeneID:
115115620
NCBI-ProteinID:
XP_029499970
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MVRAALVTATSLALTGAVIAHAYFLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVGLFTLLLFIKCFHWLA
EDRVDFMERSPNISWVFHFRVFSLMLLLGVLDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTMVLTTFIKYTLHTVDLQSDNPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLLASDNVCIICREEMVA
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASNPNQPPAPAPAQPPAQAAPVNAP
VPGPPGNVGPGMMPHFPPGLFPFWGPFPGAAPPAGAAGAPGATETPGATEAAQTQGAGTT
GASTVGAAPAPGGPMPGFPFHSFPPPPFPSAPWLTMPPPPPPFVSSMPPPPPALSTMSEA
ELRELEQQGRRGLEARLQCLHNIHTLLDAAMLNIDQYLTTVATLIPPQSETSSVAGEASG
SSPPSTSAETQENQENDSQSSTAAEPEAVNGATGFSQPDSTTLGDSEDQGDGEEVGEDGE
PNPSELRRRRLRKLETTPPPPDH
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgtgcagcgctggtgactgccaccagtctggctctgactggcgctgtgattgcc
catgcctactttctcaaacatcagttctaccccactgtggtctacctcaccaagagtagc
cccagtatggcagtgttgtacatccaggcgtttgtgttggtgttcctgttgggaaagttc
atgcgtaaagtcttcttcgggcagctgagagctgcagagatggagcatctgatagagcga
tcctggtatgctgtcacagagacgtgtctggcctttactgtgttcagggatgacttctct
ccccgcttcgtaggcctcttcaccctgctgctcttcatcaagtgcttccactggctggct
gaggacagggtggactttatggagagaagtcctaatatatcctgggtcttccacttcagg
gtgttctctctgatgttgttgctgggagtcctggacttcctgtttgtcaaccatgcctgt
cacagtatcatcacacgaggggcctctgtccagctggtctttggatttgagtatgccatc
ctgatgacaatggtgctcaccaccttcatcaagtacaccctccacactgtcgacctccag
agtgacaacccctgggacaacaaagcagtctacatgctctacaccgagctcttcactggt
ttcatcaaggtcctcctgtacatggcgttcatgaccatcatgataaaggtgcacaccttc
cctctattcgccatccggcccatgtacctggctatgaggcagttcaagaaagctgttacg
gatgcaataatgtcacggcgagctatccgcaacatgaatacactttacccagatgccact
cctgaagatctgctggcttcagacaacgtgtgtatcatctgtcgtgaagagatggtggct
ggagccaagaaacttccctgcaaccatatcttccactcaagttgccttcgctcctggttc
cagagacagcagacgtgtcctacatgtcgtatggatgtcctccgggcctctaaccccaac
cagcctcccgccccagcgcctgcccagcctcctgcccaggcagcacctgtcaacgcccct
gtccctggtccacctgggaacgttggccctggaatgatgccccacttccccccagggctg
tttcctttctgggggcccttccctggagcggccccccctgctggtgctgctggcgcccca
ggggccacagagaccccaggggccacagaggcagctcagactcagggagctggcaccact
ggggccagtacagtcggtgctgctcctgctccaggaggccctatgcctgggttccccttc
cactccttcccacccccaccgttcccctcagctccgtggctgactatgccaccaccacct
ccaccgtttgtgtcatccatgccccctcctcccccggccctgtccaccatgtcagaggct
gagctgagggagctggagcagcagggccgtagaggcctggaggccagactgcagtgtctc
cacaacatccacactctactggacgctgccatgctcaacatcgaccaatacctcactacc
gtcgccacactcattcctcctcagtcagaaaccagcagcgtggctggagaggccagcgga
tcatctcctccctccactagtgcagaaacccaggagaaccaggagaacgactctcagagc
agtacagccgctgaacctgaagctgtgaatggggccacaggtttctcccagccagactct
accacgttgggcgacagtgaagaccagggggatggagaggaagtcggggaagacggagag
cccaacccttcagagctgaggcgccgtcgtctccgcaaactcgagaccacaccccctcct
cctgaccactaa
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