Oncorhynchus nerka (sockeye salmon): 115115715
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Entry
115115715 CDS
T07952
Name
(RefSeq) E3 ubiquitin-protein ligase Topors-like
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115115715
03036 Chromosome and associated proteins [BR:
one03036
]
115115715
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
one03037
]
115115715
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115115715
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115115715
UBL E3 ligases
115115715
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
115115715
Cilium and associated proteins [BR:
one03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
115115715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
zf-rbx1
zf-RING_5
RING_XB3-XBAT31
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
115115715
NCBI-ProteinID:
XP_029500061
LinkDB
All DBs
Position
Unknown
AA seq
904 aa
AA seq
DB search
MAAAKMTLRLRKKSALDKSSEVLSAEASPDSKCPICLDRFNNMAYLDLCLHKFCFRCIHE
WSKNKAECPLCKQPFNSIYHSIQSEKDFKKYDLRPTENGSFGSFAGERFRYRTTLTGARR
QDQRRTSPPPDNGVMFEALTGASPPPRQDRGLRRMMARLAARRRAESEGRTVRSLREQEM
IKFRRALYRRGVRVRSVRDGGRSRDISAEFFQKNPACLHRLLPWLKRELVVLYGAHGSLV
NIVQHIIMSRITRYDMEDRAIHEELQPFLQARTDHFLHEFVNFARAPFNMEAYDQHAVYD
CPAPSSDEGSSSNSSVIAISEDEEEGDSVELDPMSGGALSQSTWDDETPGPSYSTTEPTR
ALLLSIRDSDSESSLGEECGAVLQPKAPRLIADSAWVKTDKDGQACTSSGDEDCIIVGFV
KPLAERTPELVKLSSDSEESVLEEIKDEVPRLLQHIRFTSLSPASSQGQCPGKAEGVERK
QDVSCSKERRNTSPSIRCETSSSKSASKSRGQTEKDGRRCHSRDRSRERPRSRSRDRGRR
SRSADRSRSTKSPAISINSDSTLSRGRRQSRSQSRDRSHTKWEKTRDNKDSSRSGRSHDS
SSHSYHWHYYSRESERDSSATLYTERRSYYSSSHRNIDCRSPSQSPDSHRRDKRRSRSRS
STCSPSGAHRKSRHEKPSGKRKYKSRHLEEPAPKDQSSKALDEPPSSTTSSYVKDKKKSK
EKRHRKSKEKSGGKRSRSLSVEIIFEGSSSEQTRKHQKKKKKHKKKGKRHRSKERTGSRK
HSPTVITIDSDSDQHTAAGANDANHTCPVSSSTSNSVLAPSTTTTTGNPADSGLLESMLQ
DWEQQIPPVGLDSGVLEAKPPINVAAASDTPTHSEGVLSQSASADEANSHSPSNDNTSHF
LEES
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagcaaagatgaccttacggctacgcaagaagagtgccctggacaagtcctct
gaggttttgtctgccgaggcgtctccagactctaagtgccccatctgtctggaccgattc
aacaacatggcctacctcgatctctgcttgcacaagttctgcttccgctgcatccacgag
tggtccaagaacaaagccgagtgcccgctatgcaagcagccattcaactctatctatcac
agtatacaatcagagaaggacttcaagaagtatgacctgcggcccacggagaacggttcc
tttgggagtttcgcaggggaacggttccgctaccgcaccacgctgacgggggcgcgtcgg
caggaccagagaagaacatcccctccccccgacaacggggtcatgttcgaggccctaacg
ggggcttccccccctcctcgacaggaccgaggcctccgccgcatgatggcgcgcctggcg
gccaggaggcgggcagaaagcgagggccggaccgtgcgcagcctccgtgagcaggagatg
atcaagttcagacgggcgctctaccggcgaggggtgcgagtgcggagcgtgcgagacggt
ggccgttcccgggacatctcggcggagttctttcagaagaacccggcctgcctgcaccgc
ctgttgccctggctgaagagagagctggtggtgctgtacggcgctcacggctccctggtc
aacatcgtgcagcacattatcatgtcccgcatcacccgctatgacatggaggaccgggcc
atccacgaggagctgcagcccttcctccaggcccgcaccgatcacttcctgcatgagttt
gtcaacttcgcccgagcacccttcaacatggaggcctacgaccagcatgccgtctacgac
tgccctgcgccgtcctcggacgagggcagcagctccaactcctcggtgattgccatctcc
gaggatgaggaggagggcgattctgtggagctggaccccatgtccgggggcgccctgagc
cagtcaacatgggacgacgagacacccggaccttcgtactccacaacagaacccaccagg
gccctgctgctatccattagagactcggactcagagagcagtttgggggaggagtgcgga
gcagtgttacagccaaaggcccctcgcctgattgcagactctgcttgggtgaaaaccgac
aaggatggacaggcgtgtacctcctctggcgatgaggattgcatcatcgtgggctttgta
aaaccccttgctgaaaggactccggagctggtcaagctgtcctctgactcagaggagtct
gttctggaggagatcaaagatgaagtgcccaggctgcttcaacacatccgcttcaccagc
cttagccccgcctcctctcaaggccaatgtcctgggaaggcagagggggtggaaaggaag
caagatgtatcgtgctccaaggagagacgtaacacctcaccctcaattagatgtgagaca
tcatccagtaagtcagcaagcaaaagcagaggacaaactgagaaagacggcaggagatgt
cacagtcgagatagatctagagagaggccacggtcgagaagtagagaccgggggaggagg
tccaggagcgccgaccgcagccgctcgaccaagagcccggctatctccatcaacagcgac
agcactctgtccagaggcaggaggcagtcacgctcccaaagccgcgaccgctcccacact
aaatgggagaagacgagggacaataaagatagcagccgatcaggccgcagccacgactca
tcgtcgcactcctatcactggcactactacagccgggagagtgagagggacagcagtgcc
acgctctacacagagaggaggtcctactactccagctcacacaggaacatcgattgcagg
tccccgagccagagtcctgattcccaccgacgggataagaggcgctccagaagtcgttcc
agcacctgttcgccgtccggcgctcacaggaagtctcgtcacgagaagcccagcgggaag
agaaagtacaaatcgagacacctggaggaacctgcccccaaagaccagtcctccaaagcc
ctcgacgagcctccctcctccaccacctcgtcctatgtgaaagacaagaagaagagcaaa
gagaagcgtcacaggaagtccaaggagaagtctggggggaagaggagcaggagcctcagc
gtggagatcatctttgagggcagctcctcggagcaaaccaggaagcaccagaagaagaag
aagaagcacaagaagaagggcaagaggcacaggagcaaagagcgcacagggtccaggaaa
cactcgcccactgtcatcaccatagacagcgacagtgaccaacatactgccgcaggcgct
aacgatgctaaccacacctgcccggtaagcagcagcacaagcaacagcgtgctagcgcct
agcacaaccaccaccacaggcaaccctgcagattctggcctgctggagtccatgttacaa
gactgggaacagcagattccacctgtgggtctggacagtggagtgctggaggccaagcct
cctataaatgttgctgctgcttctgacacacccacacatagtgagggggttctgtcccaa
tctgcctctgcggatgaggcgaactctcatagcccttcaaatgacaacacaagtcatttt
ttggaagaatcataa
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integrated database retrieval system
