KEGG   Oncorhynchus nerka (sockeye salmon): 115115812
Entry
115115812         CDS       T07952                                 
Name
(RefSeq) F-box/WD repeat-containing protein 11 isoform X1
  KO
K03362  F-box and WD-40 domain protein 1/11
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04114  Oocyte meiosis
one04120  Ubiquitin mediated proteolysis
one04218  Cellular senescence
one04310  Wnt signaling pathway
one04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    115115812
 09130 Environmental Information Processing
  09132 Signal transduction
   04310 Wnt signaling pathway
    115115812
   04340 Hedgehog signaling pathway
    115115812
 09140 Cellular Processes
  09143 Cell growth and death
   04114 Oocyte meiosis
    115115812
   04218 Cellular senescence
    115115812
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:one04121]
    115115812
   03036 Chromosome and associated proteins [BR:one03036]
    115115812
Ubiquitin system [BR:one04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     115115812
Chromosome and associated proteins [BR:one03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     115115812
SSDB
Motif
Pfam: WD40 Beta-prop_TEP1_2nd WD40_Prp19 Beta-prop_TEP1_C WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_SCAP WD40_MABP1-WDR62_2nd Beta-TrCP_D Beta-prop_WDR75_1st WDR55 Beta-prop_EML Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 ANAPC4_WD40 F-box-like Beta-prop_IP5PC_F WDR90_beta-prop_4th Beta-prop_DCAF12 WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_DCAF4 NBCH_WD40 WD40_like Beta-prop_IFT140_1st F-box Beta-prop_HPS5 Beta-prop_WDR11_2nd Beta-prop_VPS8 WD40_RFWD3 Beta-prop_Nup120_160 Beta-prop_WDR19_1st PEP5_VPS11_N WD40_2 DUF1513
Other DBs
NCBI-GeneID: 115115812
NCBI-ProteinID: XP_029500162
LinkDB
Position
Unknown
AA seq 529 aa
MEPEMEDNTLELMNTSVMESQNHVDDLSPKKTTILTKLSNGPVMTGSRKRPSEGNCDKEK
EQCIALFDQWSETDQVEFVEHLISHMCHYQHGHINSYLKPMLQRDFITALPAQGLDHIAE
NILSFLDAQSLCSAELVCKEWQRVISEGMLWKKLIERMVRTDPLWKGLSERHQWEKYLFK
NRTTEVPPNSYYHSLYPKIIQDIETIEANWRCGRHNLQRIQCRSENSKGVYCLQYDDDKI
ISGLRDNSIKIWDKQSLECLKILTGHTGSVLCLQYDERVIVTGSSDSTVRVWDVTSGEVL
NTLIHHNEAVLHLRFCNGLMVTCSKDRSIAVWDMASPTDISLRRVLVGHRAAVNVVDFDD
KYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECG
ACLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSG
RVFRLQFDEFQIISSSHDDTILIWDFLNVSTNGQSEGRSPSRTYTYISR
NT seq 1590 nt   +upstreamnt  +downstreamnt
atggagccggagatggaggacaacacgttggaattaatgaacacgtcagtcatggagtcc
cagaaccacgtagacgacctctccccaaagaaaaccacaattctcaccaagcttagtaat
ggtcctgtaatgacaggctctcgtaagcgtccgtcagaggggaactgtgacaaggagaag
gagcagtgcatcgccctgtttgaccagtggtctgagactgaccaggtggagtttgtagaa
cacctcatctcccatatgtgccactaccaacacggccacatcaactcctacctcaaaccc
atgcttcaacgtgacttcatcacagcactgccagcccagggtctggaccacatagcagag
aacatcctgtcgttcctggacgcacagtctctgtgctccgcggagctggtgtgtaaggag
tggcagagggtgatctcagagggcatgctctggaagaaactcatagaacgcatggtgcgc
acagaccccctctggaagggcctgtccgagaggcaccagtgggagaagtatctgttcaag
aaccgaacgacagaagtcccgcccaactcctactaccactccctctaccccaagatcatc
caggacatagagactattgaggctaactggcggtgtggcagacacaacctgcagaggatc
cagtgtcggtcagagaacagtaaaggagtctattgcctccagtacgacgacgataagatc
atcagtggccttagagacaactccataaagatctgggacaagcagtctctggagtgtctg
aagatcctgaccggtcatacaggctctgtgctctgtctgcagtatgatgagagagtcatt
gtcactggctcctccgactccactgtcagggtgtgggacgtgacgtcaggtgaagtactg
aacactctgatccatcacaacgaggcggtgctccacctgcgcttctgcaacggtctgatg
gtgacgtgttccaaggaccgctccatcgccgtgtgggacatggcctcgcccaccgacatc
agcctccggcgcgtcctcgtggggcaccgagccgccgtcaacgtggtcgacttcgacgac
aaatacattgtgtcggcgtctggagaccgcaccattaaggtgtggagcaccagtacgtgt
gagtttgtgcgcactctaaacggacacaagcgaggcatcgcctgcctgcagtacagagac
cgactagtggtcagcggctcctcggacaacaccatacggttatgggatatagagtgtgga
gcgtgtttgcgcgtgttggagggtcatgaggaactggtccgctgcattcgcttcgacaac
aagaggatcgtcagtggtgcctacgacggtaagatcaaggtgtgggatctgcaagctgct
ctggatccacgagccccagccagcaccttgtgcctgcgcacactggtggagcactcggga
cgtgtgttccggctgcagtttgacgagttccagatcatcagcagttcccatgacgacacc
atcctcatctgggacttcttgaatgtgtcgaccaatggccagtcagagggccggtccccc
tcacggacctacacctacatctccagatag

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