Oncorhynchus nerka (sockeye salmon): 115115944 Help Entry 115115944         CDS       T07952                                  Name (RefSeq) roquin-2-like isoform X1   KO K15690   RING finger and CCCH-type zinc finger domain-containing protein Organism one  Oncorhynchus nerka (sockeye salmon) Brite KEGG Orthology (KO) [BR:one00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:one03000]     115115944    04121 Ubiquitin system [BR:one04121]     115115944 Transcription factors [BR:one03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     115115944 Ubiquitin system [BR:one04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     115115944 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Roquin_1_2-like_ROQ ROQ_II zf-CCCH zf-RING_5 zf-RING_UBOX zf-RING_2 zf-CCCH_4 zf-C3HC4_3 zf_CCCH_4 Prok-RING_4 zf-C3HC4 zf-RING_4 zf-C3HC4_4 Motif Other DBs NCBI-GeneID:  115115944 NCBI-ProteinID:  XP_029500283 LinkDB All DBs Position Unknown AA seq 1210 aa AA seqDB search MPVQAAQWTEFLSCPICYNEFDSSGHKPISLGCSHTVCKTCLHKLHRKACPFDQTAINTD IDLLPVNSALLQLVGAQAVESQAVTLSSAVEVGHYEVCRVCVEELALYLKPISGGKGVVT LSPSVLSRPMQRKLVTLVNCQLVEEEGRLRAVRAGRSLGERTVTELILQHQNPQQLSANL WAAVRARGCQFLGPATQEDALKLVLLALEDGSALSRKVLVLFVVQKLEARFPQASKTSIG HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRAYEALRREHDAQIVHIALEAGLRISPEQW SSLLYGDLIHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNSLRPHLELLANI DHNPDAAAAPCWEELESVMLAVKVVVHGLVEFIHNFSRKSHETAQPQPNSKYKTSICRDL RQQGGCPRGSNCTFAHTQDELEKNRMRNKKISGVGRPFLLAQGSMGSGLSMEGGDSGEEA CTGGLKSSDSGGSGSLKEGATPSQLMPRGEDMMEEMKRERSVLNGSTGSSRSSSGSMEQK SISPPKTPVNSSSAPSPYGPGSRLECDSAHPKQAQYLMIRPLPQPPPHQPQSSELCYQDP QPPYDVQPYQPASNYYPSAIHHHKPCVARFLRSSHVPESSLPPSMAPLYSEQYPSLPPPR EHAGPSPYGPSSVPQYGPLVPAHGGYAPLYDSRHMWRPQLYHREDARSNSLPPEVLHSSV YQPPLRERYASLDSPYCSAGEHRAALHRNSYGRFPLGCEDLFRRKQEQWAHHHHGNVNRP SQSSPVFTVDFGAEHDGGGGGQCMNCKFRGEENLSHYSPWSCGTISTCISPFEPEHHKAS AHSRSENLEVDNGERTRWLHTFEPYRRLKDEDPSIPFEYYRRLKDEDPSIPFETYRRLKD EDPSIPFEPYRRLKDEDPSIPFEPYRRLKDEDPSIPFETYRRLKDEDPSIPFDPYCRLKD KDPSIPFEPYRRLKDEDPSIPFGEGPIIPFGEGPIISKWGVISRASRTGYHTTDPVQATA CQGSNSTIPINFRDYGPHIGHGDYRWSSGGSDSSSHSSFLEGEQLATLRRSFSSGEKVGA GDMLQTDYCKDTTEHQLDRDVELELSVLDVEDTVLQDNSQQSEKPLELREPHLLTPPSSE PMRTQTDKLSADKMEAQLLKKMAFRRSLSPGGLGSGGLSVGKLMMRTGPLRLGDMGPCPN TGPEMLLNGN NT seq 3633 nt NT seq  +upstreamnt  +downstreamnt atgccagtgcaggcggcccagtggacagagttcctctcctgccccatctgctacaacgag ttcgacagcagcggccacaagcccatcagtctgggctgctcgcacactgtgtgtaagacc tgtctccacaagctgcaccgcaaggcctgtccgttcgaccagacagccatcaacactgac atcgacctcctgccagtcaacagtgccctgctacagctggtgggagctcaggctgtggag tcccaggctgtgactctgagcagtgctgtggaggtagggcactatgaggtgtgcagggtg tgtgtggaggagctggctctctatctcaaacccatcagtggaggaaaaggtgtggtgacc ctcagtccaagcgtgctcagtcggcccatgcagaggaagctggtgacactcgtcaactgt cagctggtggaggaggaggggcggttgcgggcggtgcgggcgggcaggtcgctaggggaa cgtaccgtcacagagctcatcctgcagcaccagaacccacagcagctctctgctaacctg tgggccgccgtcagagcacggggatgccagttcctggggcctgccacgcaggaggatgct ctgaagctggtactgttggcgctagaggacggctcagctctgtccaggaaagttcttgtc ctttttgtggtccagaagctggaggctcggttccctcaggcctccaaaacctccatagga catgtggtccagctactctacagggcctcctgctttaaggtgaccaagcgtgacgaggac tcgtcgttgatgcagctaaaggaggagttccgtgcatacgaggcgctgcgtcgcgagcat gacgcccagatcgtacacatcgccttggaggcggggctccgtatctcccctgaacagtgg tcctctctgctctatggagacctcatccacaagtcacacatgcagtctatcatcgacaag ctccagtccccagagtcctttgcaaagagtgtccaggagctgacgatagttctacagaga acaggagacccagccaatctgaacagcctcagaccacacctggaactactggccaacatc gaccacaacccagatgcagcggcggctccgtgttgggaggagctggagagtgtgatgctg gcggtgaaggtggtcgttcatggtctggttgagtttatacacaacttcagtaggaagagc catgagacagcacagccacagcccaacagcaaatataagaccagtatctgtcgagacctc cggcagcagggtggctgtccccgaggatccaactgcaccttcgcacacacacaggacgag ctagagaagaacagaatgagaaacaagaagatcagtggcgtgggccggcccttcctcctg gcccaggggagtatgggtagtggtctgagtatggaggggggcgactcaggagaggaggcc tgcactggcggcctgaagagctcagacagtggggggtcagggtccctaaaggagggggcc acaccctcccagctcatgcccaggggagaggatatgatggaggagatgaagagggagagg tctgtacttaacggatccacaggctccagccgatcctcatctggctctatggaacagaag tctatttctcctccaaagacaccagtcaattcctcctcagctccttctccctatggccca gggtctagactagagtgtgactctgcacaccccaaacaggcccagtacctaatgataaga ccccttcctcagccacctccccaccaacctcagtcctctgaactgtgttaccaggacccc caacctccctacgacgtgcagccctaccagccagccagtaactactacccctctgcgata caccaccacaaaccctgcgtggctcgcttcctccgttccagccatgtcccagagtcctct ctgcctccctccatggcccctctgtactcagagcagtacccctccttgcccccaccacgg gagcacgctggtccctctccctacggtccctcatcggtcccccagtacgggcccctggtc ccagcccacggtggctacgctcccctgtatgacagccggcatatgtggaggccccagctg taccaccgagaggacgccaggagtaactcgctgcctcccgaggtgctgcactcctctgtg taccagcccccccttcgagagagatacgcctccctggacagcccctactgctcagcgggg gagcacagagcagcactgcacaggaactcttatgggcgttttcctcttggatgcgaggat ctgttcaggcggaaacaggagcagtgggcacaccatcaccacggcaacgtgaacaggccc tcccagtcctcccccgtcttcacggtagactttggtgcagagcatgatggcggtggtggt ggtcagtgtatgaactgtaagttccgtggagaggagaatctgtcccactactctccctgg tcctgtggaaccatcagtacctgcatcagcccctttgaaccagagcatcacaaggcctca gctcactcccgctccgaaaacttagaagtagacaatggtgaaaggacgcggtggctacac acgtttgagccctaccgccgtctgaaagacgaggaccccagcataccgtttgagtactac cgccgtctgaaagacgaggaccccagcataccgtttgaaacctaccgccgtctgaaagat gaggaccccagcataccgtttgagccctaccgccgtctgaaagacgaggaccccagcata ccgtttgagccctaccgccgtctgaaagacgaggaccccagcataccgtttgaaacctac cgccgtctgaaagacgaggaccccagcataccatttgatccctactgccgtctgaaagac aaggaccccagcataccgtttgagccctaccgccgtctcaaagacgaggaccccagcata ccgtttggagaggggcccatcataccgtttggagaagggcctatcatctccaaatggggg gtgatatcccgcgcctcccgtacaggataccacaccactgacccggttcaggccacagcc tgccagggaagcaacagcaccatccccatcaacttcagagattatggtccacacatcggc catggggactacaggtggagctccggggggtctgactcttccagccactccagtttccta gagggtgaacagctagccacccttcggcggtccttcagcagtggagagaaggttggtgca ggagacatgctgcagactgactactgtaaagacacgacagagcatcaactggacagagac gtagaactggagctgtcagtactagacgtagaggacactgtcctgcaggacaacagtcaa cagtctgagaagcccctggagctgagagagccccacctcctcacccctcccagcagtgaa cccatgaggacacagacagacaagctgtcagcagacaagatggaagctcaactactgaag aagatggccttcaggaggtctctctcccctggaggtctgggctcaggaggcctcagcgtg gggaagctgatgatgaggaccggccctctgagactgggggacatgggcccttgccctaac acaggccctgagatgctgctcaacgggaactga

DBGET integrated database retrieval system