Oncorhynchus nerka (sockeye salmon): 115116224
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Entry
115116224 CDS
T07952
Symbol
cdhr3
Name
(RefSeq) cadherin-related family member 3 isoform X1
KO
K16503
cadherin-related family member 3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115116224 (cdhr3)
Cell adhesion molecules [BR:
one04515
]
Cadherins
Cadherin related
115116224 (cdhr3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_4
Mu-transpos_C_2
Motif
Other DBs
NCBI-GeneID:
115116224
NCBI-ProteinID:
XP_029500568
LinkDB
All DBs
Position
Unknown
AA seq
841 aa
AA seq
DB search
MLSGSAPEVSLIGLPGTARLAENSKAGTVTYSFQVALSPGASLASGYPRILNSDPLTNQF
TVSMINTNKAQVTVTGTTNLDFETSPNSFVLQILAVDSTKDLALQRLTVILTDVNEPPVF
LDEESVLYVLEKSPPGQIYRPTVSDPENQPVTFTLTPSNTEFHIDVGSGFLTTTKQFNYL
TDPRSYAFNLTVSDGNNSVSRTLVINIVNRNDDKPQFLNTITDFTVSEELSPGFIVTNIT
AVVPGDSLYVIYSIGTNNYLAIHRYNGLVTIANRMDRDSAPLREDPVITVLVTATSSPSA
PPSNTITLTNTITLTITVTDINDNPPICSPDAQRVAVSETEKPGALITTVTCTDNDVEKA
FREFLFTGLSCLGCANRFALEPTGSNQIVLKGNLDLEDPSNLLDGNEYSLLAVAEDKDES
NLKGSAYIYVTVTPVNEFPPVFSPPSYFYRISELLGRGTVIGSVKATDRDLPATGVRYSL
ISGGGTGGLSNIFSLDPKLGSLALLTRPDYETTQTYSLVIRAEDGDPISPLIATTTVTIN
ITEANDEPPLCGPNQTHLIVPKDLRTGSNIQGFIMTCSDRDSPSASFIYSISGASNLNNH
FVFSPSSGTNVTRLFLKEPFDYESGLDRVWYYSLTVLVSDGNLRSAGSVPRGLTQTGTVI
INILVVDPDLTTVTTTTIPRVTYITVTENTYSIDDWYIWFVIALGTMLLLGLLSYLLYHL
CGKLYKALKHSDCSCCVPRPREDQEVLIPEPTPPKREILMEVIKINTVFDGEEVDPVTGR
VYEYNSKSGARRWKDVTTVSESVPMIQPESSSMVIPHGQHGHSAQSQARSGRASTGQSVR
E
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgctttcaggctcggctccagaggtttcgttgataggcctgccaggcacagctagactg
gcagagaacagcaaggctggcactgtgacctacagcttccaggtggctctgtccccgggt
gccagcttggcatcaggataccccaggatactcaactctgatcccctcaccaaccaattc
actgtgtctatgatcaacactaacaaagcacaggtgacagtaacaggtaccaccaacttg
gattttgagacgtcacccaacagctttgtccttcaaatcctcgctgtggacagtacgaag
gacctggctctccagagactcacagtgatcctaactgatgtcaacgaaccccctgtattc
ctagatgaagagtctgtcctgtatgttctggagaaatccccaccaggacagatctacagg
ccaacagtctctgatccggagaaccagcctgtgacttttacactgaccccgtcaaacaca
gagtttcatattgacgttggctcaggattcctgactacaactaaacagttcaactacctg
actgaccccagaagctatgccttcaacctgacagtgagtgatggaaacaacagcgtatcc
agaacactggtcatcaacatcgtcaacaggaacgatgataaacctcagttcctaaataca
atcacagacttcacagtctctgaggagctgagtccagggtttatcgtgaccaacatcaca
gcagtggtgcccggtgactccttgtacgtcatctacagcatcggcaccaacaactacctg
gctatacacagatacaatggcctggtgactatagccaacaggatggaccgtgactcagct
cctctcagggaggaccccgtaataacggtccttgtgacagccacctccagcccctctgct
cctccctccaacaccatcaccctgaccaacaccatcactctgaccatcaccgtcacggac
attaacgacaaccctcccatctgctccccagatgcacagagggtggcagtgtctgagacg
gaaaaacctggggccctgatcaccacggtaacgtgtacagataatgacgttgagaaggcc
ttcagagagttcctgttcactggcctgtcctgtctgggctgcgctaaccgctttgctctg
gaacccacgggatccaatcagatcgtactcaaaggaaacctagaccttgaggatcccagt
aacctgcttgatggtaatgaatacagcctgttggctgtggctgaggataaggatgagtcc
aacctaaaaggtagtgcatacatctatgtgacggtgacacctgtgaatgagtttccccct
gtgtttagtcctccatcgtatttctacagaatctctgagcttcttggacgtggaacggtg
ataggatcagtgaaagctacggacagagacctccctgccaccggcgtccgttactccctg
atctctggtggaggaactggtggcctgtctaacatcttctccctggaccccaagctgggg
agtctcgccctactgacccggccagactacgagaccacccagacctacagcctggtcatc
agagctgaggatggggaccccatcagtccgctcattgccaccactacggtcactatcaac
atcacagaggccaatgacgagcctccactgtgtggccccaaccagacacatctaatagtc
cccaaggacctgaggacaggctccaacatccagggcttcatcatgacctgctcagacagg
gactccccttcagcctccttcatctactctatctcgggggccagcaacctgaacaaccat
tttgtgttctcaccttcctctggcaccaacgtcaccagactcttcctgaaggagcccttt
gactatgagagtggcctggaccgggtctggtactacagcctgactgtgctggtttctgat
gggaacctgcggtctgcagggtctgtgccgagaggtctgacccagactggcacagtcatc
atcaatatcctagtagtggaccctgacctcaccaccgtcaccactacaactatacctcgt
gtaacatacatcaccgtcacagagaacacgtacagcattgacgactggtatatatggttt
gtcattgctctggggaccatgctactgcttggtttactctcatacctgctgtatcacctc
tgtgggaagctctacaaggctcttaagcacagtgactgctcctgctgcgtacccaggccc
cgggaagaccaggaagtactgatcccagaaccaacacctccaaagagggaaatattaatg
gaagtgatcaagatcaacactgtatttgatggagaggaagttgatcctgtcacagggagg
gtgtacgagtacaacagtaagtctggagccagacgctggaaggacgtcaccactgtgtct
gagtctgtccctatgatacagccagagagcagcagcatggtcattcctcatggtcagcat
ggtcattctgcccaatcacaggctaggagtgggagggctagcactggccaatcagtgagg
gagtag
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