Oncorhynchus nerka (sockeye salmon): 115116318
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Entry
115116318 CDS
T07952
Name
(RefSeq) polycystin-2-like
KO
K04986
polycystin 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
one03037
]
115116318
04040 Ion channels [BR:
one04040
]
115116318
Cilium and associated proteins [BR:
one03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
115116318
Ion channels [BR:
one04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
115116318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
Ion_trans
Motif
Other DBs
NCBI-GeneID:
115116318
NCBI-ProteinID:
XP_029500652
LinkDB
All DBs
Position
Unknown
AA seq
520 aa
AA seq
DB search
SHAEKLLQYLLLCCVVTYGMVGSNMYYYTKVMSQLFLDTPLSPGDTATFRSLSTMGEFWK
FTEGPFLNGMYWEVWYNNKSLPENHSMIYYENLLLGVPRLRQVKVRNESCSVHEDLRDEV
QDCYNMYTPSNEDSAPFGPMNGTAWMYTEENSLNGSSYWGQVATYGGGGYYQDLARSRDE
SAGLLRSLKHQLWLDRGTRAVFLDFSVYNGNINLFCIARLVVEFPATGGVVTSWQFQTVR
LIRYVSSWDYFVGVCEVAFCLFILYYVVEEALEIRIHRLRYFKSVWNCLDVLIVVLSVSA
IIINITRTSVVSNRLKDLLENHSAHPSFEPLAHLQVTFNNMAAVIVLFSWVKLFKFINFN
KTMSQLSTTMSRCAKDLIGFAIMFFIIFLAYAQLAYLVFGTQVNDFSTFQACIFTQFRII
LGDFEFSEIEEANPVLGPIYFITFVFFIFFILMNMFLAIINDTYSEVKADMSQQRSEMEM
TDLIKKGCNKALMKLRLKKTTVDDISDSLRQAGGKLNFGE
NT seq
1562 nt
NT seq
+upstream
nt +downstream
nt
aatctcatgcagagaaactcttacagtatcttctgttgtgttgtgtagtgacctatggga
tggtaggctccaacatgtactactacaccaaggtgatgtcccagctcttcctggatacac
cactgtccccgggagacacagccacattcagaagcctctcaactatgggtgaattctgga
agttcacagagggtcccttcctgaacgggatgtattgggaagtgtggtacaacaataaga
gtctccctgagaaccacagtatgatctactatgagaacctgctactgggggtgccccgcc
tccgccaggtcaaagttcgcaacgaatcctgctccgtgcacgaggaccttagggatgagg
tgcaggactgctacaacatgtacaccccgagcaacgaggacagcgccccctttggcccca
tgaacggaactgcgtggatgtatacagaggagaacagcctgaatgggagtagttactggg
gccaggtggctacctacggtggaggggggtactaccaggacctggcccgttccagagatg
agtcagctggcttgctacgctccctaaaacaccagctgtggctggacagaggaaccagag
ccgtcttcctggacttctccgtctacaacggcaacatcaacctcttctgtattgccaggt
tggtggtggagttccccgctacaggaggcgtagtcacttcctggcagtttcagacggtgc
gtctgattcgctacgtgtccagctgggactactttgtcggggtgtgtgaggtggccttct
gcctcttcatcctgtactacgtggtggaggaggccctggagatacgcatccaccgcctgc
gctacttcaagagtgtgtggaactgcctggatgtcctcatcgttgtgttgagtgtttctg
ccataatcatcaacatcaccagaacatcagtggtgagcaatcgtctcaaagaccttctgg
agaaccacagcgcccaccccagcttcgagcctctggcacacctccaggttacgttcaaca
acatggccgcagtcatcgtccttttctcctgggtgaagctcttcaagttcatcaacttca
acaagaccatgagccagctgtccaccaccatgtctcgctgtgccaaggacctcatcggct
tcgccatcatgttcttcatcatcttcctggcctacgctcagctggcctacctggtgtttg
gcacccaggtcaacgacttcagtaccttccaagcctgcatttttacccagttccgcatca
tcctgggagactttgagttctcagagatagaggaggctaacccagtcctgggacccatct
acttcatcaccttcgtcttcttcatcttcttcatcctcatgaatatgttcctggccatca
tcaatgacacctactcagaggtgaaggcagacatgtcccagcagaggtctgagatggaga
tgacggacctcattaaaaagggctgtaacaaagccttgatgaagctgagactgaagaaga
ccactgtggatgacatatcagacagtctgcgccaggccggtgggaaactcaacttcggcg
ag
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