Oncorhynchus nerka (sockeye salmon): 115116332
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Entry
115116332 CDS
T07952
Name
(RefSeq) aryl hydrocarbon receptor-like
KO
K09093
aryl hydrocarbon receptor
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115116332
Transcription factors [BR:
one03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
115116332
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
bHLH_HIF1A
HLH
bHLH_NPAS4
PAS_9
PAS_4
Motif
Other DBs
NCBI-GeneID:
115116332
NCBI-ProteinID:
XP_029500670
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All DBs
Position
LG3:complement(38082334..38132840)
Genome browser
AA seq
1028 aa
AA seq
DB search
MLSNAGVYAVKKRKKPVQKTKKTPAPEVVKSNPSKRHRDRLNGELDRLTGLLPFPEDVCS
RLDKLSVLRLSVGYLKVKSFFKVFLQALNGFVLVVTAEGHVFYASPTIQDYLGFHQSDVV
HQSVFELIHTDDRATFRRQLHFALNPKPFDPEQGGDGMASSSDITRNIVTYNPEQLPPEN
SSFLERNFVCRFRCLLDNSSGFLALNFQGRLKFLHGQSMLGDDGTRSQPNLGLFTIATPV
QNPSILEIRTKTIFFQTKHKLDFTPMGVDARGKVVLGYSEMELCMRGSGYQFIHAADMMY
CADNHVRMIKTGESGLTTFRLLQKTGCWVWVQANARLVYKGGRPDFIIARQRALLNSEGE
EHLHQRKMQLPFSFTTGEALLYETGPTLDATEFQTNSPKIRKVESLDPQSLLGSLLKQDE
SVYTQPQEPQLPIDQAFMDSRALTNVACNSWQSSMEPQGPDGDDDGDGPSEVKQKGAVVA
MIDALEKMARDGDLCEALQGLDVDTAELMEWESALLRLSQGSNGTGGGDTSPELDDIMTN
DIFSYVEEALFKESSEGSGNQPNCSIMVNNNPNLNLFTEVFNNNNQDGPFTGMVSPTGVG
QCKPGLLDSRSFIHNGSPVNSLNGQVTGNGPDGLAGQNQAGPHQVFNSTQRLSHFGPQIP
QMDLNIPTLQQLQLNDIFAPSLELPELSIPHSSGQNGAVTFCTNMAGSCAQAPNNHMGSP
QGITGQVHSNQPPPQFFIHNGLPATMAPNGPQQISVPQSNHVAPSLVDGWASMIPSNAFV
SPQIESSNLNLSNPLPTACLQGNSAPFQSLKIQRVQQWPQNQQQLPPPASTIQNGIMENG
HTFIPDCHSQDTETQRVPLTGLWPQNPNRLYHQTQHGGLANGQPAPSSSCMFENISPPLP
NGNSHVDGTRLAPTLSVCQSRMVDPQDQSPPQGSCYFQWGPSEPVVGTSAVIQDSASTSP
PSRPLVANITTPEGLLAMQQYLAGCSGVGQTQIPSLPVIDSNGIFSLPPLVNGSMCFTEH
NQINYCNF
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgttgagtaacgctggagtctatgctgtcaaaaagcggaagaagcccgttcaaaaaacc
aagaaaacccctgctccagaagtggtcaagtcgaacccttccaaacgccaccgggatcgg
ctgaacggggagctggacaggctgacgggccttctaccattccctgaggatgtgtgctct
cgcctggacaagctctccgtgctccgcctcagcgttgggtacctgaaggtcaagagcttc
ttcaaagtattcttgcaggctctgaatggctttgtgctggtggtcacagctgaaggacat
gtgttctatgcctctcctactatccaagactacctgggcttccatcagtcagacgtggtt
caccagagtgtgtttgagctgatccacacagacgacagagccacgttcagacgacagctt
cactttgccctcaaccccaagccctttgacccagagcagggaggagacggcatggcaagc
agcagtgacatcaccaggaacattgtgacctataaccctgagcagctccccccagagaac
tcctccttcctggagaggaactttgtgtgtcgcttccgttgcctcctggacaactcctct
ggcttcctggctctgaacttccaggggcgtctcaagttcctccatggccagagcatgctg
ggggatgacgggacacgcagccagcccaacctgggcctgttcaccattgccacccctgtc
caaaacccgtccattttggagatcagaactaagacaatcttcttccagaccaaacacaag
ctcgacttcacccccatgggtgttgatgccagggggaaggtggtcctgggctactcagag
atggagttgtgtatgagaggctctggttatcagttcatccatgcagctgatatgatgtac
tgcgcagacaaccatgtcagaatgattaagacaggagagagtggtctgaccacgttcaga
ctgcttcagaagactgggtgctgggtctgggtccaggccaatgctaggctcgtctacaaa
ggaggaagacctgacttcatcatcgcacgccagagagctttgcttaattccgagggagag
gagcatttacaccagaggaagatgcagctgcccttcagcttcaccaccggggaggccctg
ctgtacgagaccggccccactctggatgccactgagttccaaaccaactccccaaaaatc
cgcaaggtggagtctctggacccccagtctctgctgggctccttactgaagcaagatgag
tccgtctacacccagccccaggagcctcagctacccatagaccaggcattcatggacagc
cgagcgctcaccaatgtggcctgtaactcctggcagagtagcatggagccccaggggccc
gacggggatgatgatggtgacggccccagtgaggtgaagcagaagggggcggtggtggcc
atgatagacgccctggagaagatggcacgagatggggacctgtgtgaggcgctgcagggg
ctggacgtggacacggccgagctgatggagtgggagagtgccctcctcaggctgagccag
ggatccaacgggactgggggcggggatacctcgccggagctggatgacatcatgaccaat
gacatcttctcttacgtggaggaagccttgttcaaggagagcagcgaggggagcggtaac
cagcccaactgctccattatggtcaacaacaaccctaacctaaacctgttcacagaggtg
tttaacaacaacaaccaggatggaccattcacaggaatggtcagccctacaggtgtagga
cagtgcaagcccgggttgcttgacagccgcagctttatccataatggctccccagtgaac
agtctaaatggtcaggtaacaggcaatggaccagatggtttggcaggacagaaccaggca
ggaccacaccaggtgttcaacagcacccagaggctctcccactttggcccccagatccct
cagatggacctgaacatccccaccctgcagcagctacagctcaatgacatcttcgccccc
tctctggagctccccgagctcagtatcccacacagctcaggccagaacggggctgttacg
ttttgcaccaacatggctggatcctgtgctcaggcaccgaacaaccacatgggaagccct
cagggtatcactggccaggtccactctaaccagccacctccacagtttttcattcataat
ggcttgccagctacaatggcaccaaacggacctcaacagatctctgttccgcagtccaac
catgtagcacctagtctggtggatggctgggcatccatgattcccagtaatgcctttgtt
tcaccccagattgaatctagcaatctcaatctatctaatccacttccgactgcttgcctt
cagggaaacagtgcaccatttcagtcactcaaaatccagagagttcagcagtggccccag
aaccagcagcagctgccacccccagccagcacaatacagaatggaataatggaaaatgga
cacacattcatccctgactgtcacagtcaagacacagagacgcaaagagtccctctcaca
ggcctttggccacagaaccccaacagactgtaccaccaaactcagcatgggggattggcc
aatggccagcctgctccatccagtagctgcatgtttgagaacatctcaccccccttacct
aatggaaacagccacgtggatggcaccaggctggcccccacgttgtctgtatgccagagt
aggatggtggacccccaggaccagagtcctccacagggctcttgctactttcagtggggc
cccagtgagccggtggtgggcacgtcagccgtcatccaggacagcgccagcaccagcccc
ccgtctcgcccgctggtggccaacataaccacccctgagggcctactggccatgcagcag
tacctggctggatgcagcggagtcggacagacacagattccaagcctccctgtcatagac
agcaatggaatattctctttaccaccccttgtaaatggatccatgtgctttacagagcac
aaccaaatcaactattgcaacttctaa
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