Oncorhynchus nerka (sockeye salmon): 115116367
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Entry
115116367 CDS
T07952
Name
(RefSeq) SURP and G-patch domain-containing protein 1-like
KO
K13096
splicing factor 4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115116367
Spliceosome [BR:
one03041
]
Complex A
Other components
Complex A specific factors
115116367
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Surp
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
115116367
NCBI-ProteinID:
XP_029500711
LinkDB
All DBs
Position
Unknown
AA seq
656 aa
AA seq
DB search
MESGNTGRGGWNNKFRPAQKNRMSVNILRQEELIAQKKREIEAKMAEQAKKKSLQTPNKP
LPPSLQGHSSNNNKYVNDGSFLQQFMKLQKDKPSSDSGSSSDTKAPSSSTPSPSSGVSQP
QMKSILIGKRPGLGISSMLNQFKNYSQSKKNPLRPQRPSIFSSPDEDDDDDDDEEVDDSS
FLEIKVFPPEDSDTRLILDKMAAFVAEGGPELERKAKEDYKDNPVFSFLYDNNSRDYLYY
RKRVAELRKDHSKHETPSRSHVSPPVDEETQRVAEKLAMFVADGGPEVEAIAAQHNQENP
TFSFLYDLQSPAHRFYKEKVEEYRQAKNAQSPPPMIKQEPGVELKRLAAPPLIYPLPPPP
PHYPYLVGQVKLEPGLGIKQEVSGPPVVKRKRKSRWGSEDDKVDLSLQPIIIPKEEEPEP
SPCLSVNELRDLGYKKGKPMGLVGVTELSDDQKKQLKEQQEMQEMFDMIMKHKRAMAEMQ
VMWEKAVQDHSHEYDSDEEVDQQAGTWEHRLRHMEMEKTREWAESLTDMGKGKHFIGDFL
PPEELEKFMETFKALKEGRDPDYSEYKEFKLTVENLGFQMLMKMGWKEGDGLGSGGQGIK
TPVHRGTTAVDGAGFGVDRPSVLSGQDDEYDAFRKRMMLAYRFRPNPLNNPRRPYY
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggagtccggaaatacagggagaggaggctggaacaacaagttccggccagcccagaag
aacaggatgagtgtgaacattctccgtcaggaggagctgatcgcccagaagaagcgggag
atcgaggctaagatggcagagcaggccaagaaaaagagccttcagactcccaacaagcca
ctgccaccaagtttacagggacactcttcgaacaacaacaagtatgtgaacgatggaagc
ttcttgcagcagtttatgaagcttcagaaggacaaacccagctctgactctggctccagt
agtgacaccaaagccccgtcatcatccacccccagtccgtcgtcaggagtgtctcagccc
cagatgaagagcattctcatcggcaagcgccccggtctagggatcagcagcatgctgaac
cagtttaagaactactcccagtccaagaagaacccacttcgcccccaaagacctagcata
ttcagctccccagatgaagatgatgatgatgatgatgatgaggaagttgatgactcaagc
ttcctagaaatcaaagtctttcccccagaagactcagacacacgacttattctggacaag
atggcggcctttgtggctgagggagggcctgagctagagaggaaggccaaagaggactac
aaggacaaccctgttttctcattcttgtatgataataacagccgggattatctttattac
cgaaagagagttgctgaactccgaaaggatcactcaaaacatgagacgccatcacgttct
catgtctcccccccagtggacgaggagacacagagggtggctgagaagctggccatgttt
gtggccgatggtggccccgaggtggaagccatcgccgcccagcacaaccaggaaaacccc
accttcagttttctatatgacctccaaagccccgcccaccgcttctacaaggagaaggtg
gaggagtaccgccaggccaaaaatgcccagagcccccctccaatgattaagcaggagcct
ggcgtggagctcaagagactggccgcccctcccctgatctatcctctccctcctccgccc
cctcactacccctacctggtgggtcaagtaaagctggagccgggtctggggataaaacag
gaagtgtcaggtccgcccgtggtgaagaggaagaggaagagccgctgggggtcggaggat
gacaaggtggatctgtcactgcaacccatcatcatccccaaggaggaggagccagagccc
agcccgtgtctctctgttaatgaactgagggatctgggctataagaagggaaagcctatg
ggcctggtgggagtgactgagctctcagatgaccagaagaaacagctcaaagagcaacag
gagatgcaggagatgtttgacatgatcatgaagcataagcgtgcgatggcggagatgcag
gtgatgtgggagaaggcggtgcaggaccactcccacgagtacgacagtgacgaggaggtg
gaccagcaggctggcacctgggagcaccgcctccggcacatggagatggagaaaacacgt
gagtgggcggagtcgctgactgacatgggaaaggggaagcacttcattggtgacttccta
cctccggaggagctggagaagtttatggagaccttcaaggcactcaaggagggccgtgac
ccagactattcggagtataaggagtttaagctgacggtggagaaccttggtttccagatg
ctcatgaagatgggctggaaggagggcgatgggcttggctctggcggacagggcatcaag
actccggtccacaggggaaccacagctgttgacggggcagggtttggcgtggaccggccc
tctgtgctctcaggacaggacgatgagtatgatgctttcagaaagaggatgatgctggcc
taccgcttcaggcccaacccactgaacaacccgaggaggccatactactga
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