Oncorhynchus nerka (sockeye salmon): 115116587
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Entry
115116587 CDS
T07952
Name
(RefSeq) ribonuclease ZC3H12A-like
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115116587
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
115116587
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH_4
zf-CCCH_2
UBA_N4BP1_C
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
115116587
NCBI-ProteinID:
XP_029500943
LinkDB
All DBs
Position
Unknown
AA seq
698 aa
AA seq
DB search
MKISAISMLSPVKDVLPWKEFSHTARLSPTEPHDTVGWLSTLPALHSHHPPCPICERMHP
SGTHCSAPEESGKTSTEPGEAQLDFYLKLGYSPAQVWTVLQKFGLNTDTNRVLGELVRTG
ASLEGIEKEQEKEGAPSILVARGETLSNLPLTPPPSRGDVPSEEGDALRPIVIDGSNVAM
SHGNKEMFSCLGIQLAVNFFLDRGHTDITVFVPSWRKEQPRPDVLITDQHILRELERKKI
VVFTPSRRVAGKRVVCYDDRFIVKLAHETAGIIVSNDTYRDLQGERQDWKRFIEERLLMY
SFVNDKFMPPDDPLGRHGPTLENFLRKVPRLPRKQPCPYGRKCTYGMKCKFYHPERANQS
RCSLADELRKKAKLSLSEQKHPTAGAGPAYGLSLEEGMAQKLLPLGQRNGSLKKGHISEN
VLLIKGSHRSSQRSPTKKDKTNRHLTNLDSAMPSGSQSPTDLDSALPSGSQERLDSGLGS
FESQVSDPSRDHCDHYGKAGFRNCLSPPSMRQQIYSLPSNLPSSCSSHPPQPLLGPSTGY
QQHRSRGPASTHNNTHSPHHSMGPASTYHPDKITYSPTYYLSYGAPIYPVGKHQYRYPND
FQQENRAHPPQQTYWSDPFGTYPQTLHSTAQMEKQRHWLLPRTQPHPHGESREREEVRKK
LLAIFNGRLVEKVMDMFPQLMDPQRLAAEILILQSPGL
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgaagattagtgctatctcaatgctgagcccggtcaaagatgtcttaccatggaaagag
ttctcccacacagcccgtctgagccccacagagccccacgacacagtcggatggctgtcc
actctgcctgcccttcacagtcatcatccaccctgtcccatctgtgagagaatgcaccct
agtggtacccactgctctgccccggaggagagcggcaagacctccacagaacctggagag
gctcagctggacttctaccttaaactgggctactccccagcgcaggtctggaccgtgttg
cagaagtttggcctgaacacagacactaacagggttctgggggagctggtgcggacggga
gccagtctagaagggattgagaaggagcaggagaaggagggagccccgtctatcctggtg
gcccgaggggagaccctcagtaacctgcccctcacccctccacccagccggggcgatgta
cccagtgaggagggagatgccctgagacccatagtgatcgatgggagcaacgtggctatg
agccacgggaacaaggaaatgttttcctgcctgggaatccagctggcagtaaacttcttc
ctggacagaggtcatacggacatcactgtgtttgttccctcatggaggaaggagcagcct
agaccagatgtcctcatcacagatcaacacattttgcgtgagctggagaggaagaagatc
gtggtgttcaccccgtcgcggcgtgtagcgggcaaacgtgtggtctgctatgacgaccgc
ttcatcgtcaagctggcgcatgagaccgccggcatcatcgtgtccaacgacacctaccgt
gaccttcagggcgagagacaggactggaagcgcttcattgaggagaggctactcatgtac
tccttcgtcaatgacaagttcatgccccctgatgaccctctgggtcgtcatggtcccacc
ctggagaactttctacggaaggttcctcgtttgccacggaaacagccgtgcccttatgga
aggaaatgcacttatgggatgaagtgtaaattctaccacccggaacgagccaaccaatcc
cgttgctctctggctgacgagctgcggaagaaggccaagctatctttatcagaacaaaaa
caccccactgcaggtgctggacctgcctatggcctttctctggaggaggggatggctcag
aaactactgcctctaggacagaggaatggctccctgaagaaaggccacatcagtgagaat
gtgcttctgatcaagggaagccatcgttccagccagaggtccccaactaagaaggacaag
accaaccgacacttgaccaatctggactcggccatgcccagtggctctcaatccccgaca
gacctggactcggccctgcccagtggctctcaggagcgactagattctggtcttggctcc
ttcgagagccaggtgtctgacccctccagggaccactgtgaccattatgggaaagctggg
tttaggaactgcctgtccccccccagtatgagacaacaaatctattccctgcctagcaac
ctgccttctagctgcagctctcatcctcctcagcctttactgggccccagcacaggatac
caacaacatcgcagcaggggcccagccagcacccacaacaacacccacagcccacatcac
agcatgggcccagccagcacctaccacccagacaagataacctacagccccacctattac
ctcagctatggggcaccgatatatccagttgggaagcatcagtacaggtatcccaatgac
ttccaacaggagaacagggcccaccctccacagcagacctactggtccgatccgttcggg
acttatcctcagactctccatagcactgctcaaatggagaagcagagacactggctcctc
cctcggacacagccccacccccacggggagagcagggagagagaggaggtcaggaagaag
ctgctggctatctttaacggccgtctggtggaaaaggtcatggacatgtttccccagctc
atggacccacagagattggctgctgagatcctcatcctgcagtctccgggcctgtga
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integrated database retrieval system
