Oncorhynchus nerka (sockeye salmon): 115116623
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Entry
115116623 CDS
T07952
Name
(RefSeq) NACHT and WD repeat domain-containing protein 2-like
KO
K24734
NACHT domain- and WD repeat-containing protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115116623
Domain-containing proteins not elsewhere classified [BR:
one04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
115116623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_NWD2_C
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR90_POC16_2nd
AAA_16
NPHP3_N
Beta-prop_EML
Beta-prop_RSE1_2nd
NACHT
AAA_22
Beta-prop_WDR19_1st
AAA
AAA_28
NPHP3
B-prop_COPA_B_2nd
AAA_25
DAP3
TniB
ARL2_Bind_BART
Motif
Other DBs
NCBI-GeneID:
115116623
NCBI-ProteinID:
XP_029500976
LinkDB
All DBs
Position
Unknown
AA seq
1733 aa
AA seq
DB search
MWPSRVGSRQPCPRESALRRAAISGNVLALPPHHVPTGRSVRVFICANPDDTEAERNALK
EHVYPKLRDFCRENYGIEFQVVDLYWGMDPEEWDSPDLQRLRMKLLEDCLQTSAGPCFVG
LVGEKYGSIRVPGEVEAPEFEMILDAAVEAGLDTHILEEWYCRDENSVPPAYYLKPKAQM
LKNYQNSMESSSAAKTKNDKAWRNVSEEIKGIFRRSVLQLQEKGTMKPPQAKKFLCSALE
DELDFALGKQTPAFLKKCVCYIRKISNFDRHAKLPEMAKYMDIVVAEDRVMRNQEAYERL
LKVRDEFIPTVVASSNLRVYSSVTHCDMKLGYSQEVESHYVEGLCKQFYEDMVDIIQATV
QQNFDTETDPLYDEILQHLSLCKNFSAFYDYKSETLDLVQEYLLPSKGSRMSPLVVYGGP
CTGKTLLLAQVAKQAYTWLQTEMGPETDPVVIVRFVGSSEFATNLRTLLQSICEQIAINY
RCLIHFLPNKIQEMTELLVNLLGESSFQRPLVIILDALEQLSEADEARKLWWLPAHLPRT
VRIVVSTLPNKHGILQKLRCLIHDEGRYVELVQRDRKTCSQTLKQQLLGLKRKVTSGQQI
YVNEALAKCTLPMFVNLVYREVVHWRSHKDVDDRSLCSTVHESIEQLFYSVENKLGQRFV
FRALGYITMAKAGLTEVELEDILSLDNSVLGDIMVSSNLKNPLRISYDLVARLKEELEGY
LVERQVRNVTLMVWANRHLHLIAQKLYLSNEEDVHQMHSLLAEYFLGAWSGGRKKIFHCD
NNHFASLNISQHKNPHPQQPSHKEASAEKYSYDRQTPEQPWVFQCNLLEPDIFFVNHRKM
TELLYHLTRSGRTDDLMYGVIMNFSWLYTMIKIGQFEKALTDIDVAYSYSQEKELKFLAT
TLRSIKVKVMNNPASLSAELQQRLLPVVTSLPKLRHLLLECDKDGPKYCSIVPLHSSMDV
TYSPERLPLCSSYMQIVEILPTLAPNIVLVALDDGSVSTWDVESRQLLRQIDTARSVVLG
IRLTSDEKYLVVATTKNTLLIYDNHKSCLLSEVDIKGSKHCGITGGVAFINGFTLASHHA
LAWLEASKDVNVIDLLYGWPLYQFHCWYEVTCVQCSPDGMYAFCGQYLNTTSIFHLGTGD
KLATVTSEFSGGFVKSILVLDTIHQMVMIDNEGSLSVWNTKEINNPRLMEDYDCRGDENE
VVGIELSEDQHSILICKDKSIEVLDTKLWKMAEKFKAKRAERFVAAVLSKNGQSIVASME
NTSSIFVWRRDSGQCMASLIEISGAIIKLIKSTHHNLLLSVASSGVLSVWDIDIITAMSN
IDKTGKRIQSLQLSGREDFVFTMDGSEAIHKWNFSTGFIETVFKHEGLVENCVLTSSGDL
MVTSDDKCSQYIWHTSTGENIFRINGQKISQLLMTHNDQFVVSLCEQNCSRVWRLATGHK
VCNILVTLQNALITTANTFLVGTTKNKLLAVSLWSGSISKKFVCDDGISIVNFKLIPDCP
DFVVFITSTETVFIWSVADESVCRRVQLPTNFLKNLEDFQISPNGKLGIVSKGDENINVL
DLHSGKLRLVHAAGIIWRQKLSRDGRYLVYICFRNCDEDDEAGVVSNLIVMRLADGKSIG
TCSLYKTPTFLCLSQRALNIIIGFEDGSISTYTVVDRVDAALKIKIATSNSRQIVNNASQ
KVRPKCGNHTFKTIADCVWRESTEVFSRDSPINVSDSGEPETTTPTKKSELLQ
NT seq
5202 nt
NT seq
+upstream
nt +downstream
nt
atgtggccctcgagagtggggagcaggcagccctgtccccgggaatcggcactccgcagg
gcggccatcagtggcaacgtcctcgccctgccgccgcaccacgtccccacgggcaggagt
gtccgggtcttcatctgtgccaaccctgacgacacagaagcggagaggaacgcactgaaa
gagcatgtctaccccaaactacgggacttctgcagagagaattatgggattgagttccag
gttgtggacctgtactgggggatggacccagaggagtgggacagtccagacctgcagcgt
ctcaggatgaagttactagaggactgtctccagacgtccgcaggcccatgttttgttggg
ctggtgggagagaagtatggcagtatccgcgtgccgggggaggtggaggctccagagttt
gagatgatcttggatgcggcggtggaggcgggcctagacacacacatcctggaggagtgg
tactgtcgagatgagaactccgtgccgccggcctactacctcaaacccaaagctcagatg
ttgaagaactaccaaaactcaatggagtcgagcagtgcagccaagacgaagaacgacaag
gcgtggaggaacgtgtctgaggagatcaaggggatcttccgtaggtctgtcctgcagctc
caggagaagggcaccatgaagccccctcaggccaagaaattcctctgctctgccttggag
gatgagttggactttgccttgggcaaacaaacgcctgccttcctcaagaagtgtgtctgc
tatatccgcaagatctccaacttcgaccggcacgccaaactcccggagatggccaagtac
atggacatcgtcgtcgccgaggaccgcgtcatgcgtaaccaggaagcctacgaacgtctt
ttaaaagtacgagacgagtttatccccacggtggtggcctcgtccaatctccgggtctac
tcttctgtgacgcactgcgacatgaagctaggctactcccaggaagtggagagccactac
gtggaaggcttgtgtaaacagttctacgaggatatggttgacatcatccaggccacggtc
cagcagaactttgacacagagaccgaccccttgtacgacgagatcctccagcacctctcc
ctgtgtaagaacttctcggccttctacgattataagagcgagacgctggacctggtgcag
gagtatctgctgccgtctaaagggagtaggatgagccccctggtggtctacggtgggccc
tgcacggggaagacattgctgctggcccaggtggccaaacaggcctacacttggctccag
acggagatgggccccgagacagacccggtagtcatcgtccgcttcgtgggctcctcagag
tttgccacaaatctgcgtaccctactccagagcatctgcgagcagatagccatcaactac
cgttgcctgatccacttcctgcccaacaagatccaggagatgacggagctgctagtcaac
ctccttggggagtcctccttccaacggcccctggtcatcatcctggatgcgctggagcag
ctctcagaggccgacgaggcccgcaagctgtggtggcttcccgcccacctgcctcgcact
gtccgcatcgttgtctcaacattacccaacaagcacggaatcctccaaaaactccgctgt
ttgatccatgatgaaggacgctacgtagagctggtgcagcgtgaccgcaagacctgtagt
caaacactgaagcagcagctgctggggttgaagaggaaggtgacctcgggacagcagatc
tatgtcaatgaagcgctggccaagtgcacgctacccatgttcgtcaacctcgtctaccgg
gaggtggtacactggcgctcacacaaggacgtagacgaccgttcgctgtgctccaccgtg
cacgagagcatcgagcagctcttctactcggtggagaacaagctggggcagcggttcgtg
ttcagggcgctgggatacattaccatggccaaggcgggcttaacggaggtagagctggag
gatattttgtcactggataacagtgtgctgggagacatcatggtcagttcaaatctaaaa
aacccgctgaggatctcctatgacctggtggcgaggctgaaagaggaactggaggggtac
ctggtggagaggcaggtgagaaacgttactctgatggtgtgggccaatagacatctgcac
ctcatcgcccagaagctgtatcttagcaatgaggaggacgtgcaccagatgcacagcctc
ctggccgagtacttcctgggggcgtggtcgggcggtaggaaaaagatcttccactgtgac
aacaaccactttgcctcgctcaacatctcccaacacaagaacccccacccccagcagccg
tcccacaaagaagcatccgccgagaagtactcctatgacaggcagacccccgagcagccc
tgggtgttccagtgcaacctcctggagcctgacatcttctttgtcaaccacaggaagatg
acagagctcctctaccacctgactcggagtggccgcacagacgacctcatgtacggggtc
atcatgaacttcagttggctctacaccatgatcaagatagggcagtttgagaaggcgctg
accgatatcgacgtagcctacagctactcccaggagaaagaactcaagttcttggccacc
acactgcgcagcatcaaggtcaaagtgatgaataacccggcatccctgtctgcagagctg
cagcagaggctcctccctgtggtaacctccctaccaaagcttcgacacctcctcctggag
tgcgacaaggacggccccaaatactgctccatcgtgcccctccactcctccatggatgtc
acctacagccctgaaagactgccgctgtgctccagctacatgcagatagtggagatcctg
cccaccctagcccccaacattgtcctcgtggccctggacgatgggtccgtcagcacatgg
gacgtggagagcaggcagctcctccggcagatagacacagcccgctcagttgtcctgggg
atcagactaaccagcgacgagaagtacctggtcgtagcaaccaccaagaatacgctgctc
atttatgacaaccataagtcctgcctgctgtccgaagtagacatcaagggctccaagcac
tgtggtatcacaggaggggtggctttcatcaacggattcacactggccagccatcatgcc
ttggcctggctagaggccagtaaagatgtcaatgtcatcgatctgctctacggctggccc
ctctaccagttccactgctggtacgaggtcacctgcgtccaatgctccccggatggaatg
tatgccttctgtggtcagtatcttaacaccacgtccatcttccatctgggcaccggggac
aagctagccacggtcacgtccgagttttccgggggattcgtcaagtccatcttagtcctg
gacaccattcaccagatggtgatgatcgataatgaggggagcctgtcggtgtggaacacc
aaagagatcaacaaccccagactgatggaagattacgactgccggggggacgagaacgag
gtcgtaggcattgagctgtcagaagaccagcactccatcctcatctgcaaagacaagagc
atcgaggtcctggacaccaagttgtggaagatggcagagaagttcaaggccaagcgggca
gagcgtttcgtggctgcagtcctctccaaaaatggccaaagtatcgtggcctccatggag
aacacgtcgtccatatttgtgtggaggagggacagtgggcagtgcatggccagcctgatt
gagatctctggggccatcattaaactcatcaagtccacccaccacaacctgctcctgtct
gtggccagcagtggagtgctatcagtctgggacattgacatcatcaccgccatgtccaac
attgacaaaacaggtaagaggatccagagtttacagctctctggaagggaagactttgtg
ttcacaatggacggctctgaagccatccacaagtggaacttcagcacaggcttcatcgag
actgtcttcaagcacgagggcttggtggagaactgtgtcctgacctcctccggagatctc
atggtgacgtcggatgataagtgcagccagtacatctggcatacgtccaccggcgaaaac
attttccgcatcaacggacagaagatatcccagctcctgatgacccacaacgaccagttt
gtggtgtccctctgcgaacaaaactgctcccgagtctggaggctggccaccggacacaaa
gtgtgcaacatactggtgaccctccagaacgcactgatcaccaccgcaaacaccttccta
gtgggaactactaaaaacaagctgctcgctgtcagcctctggtcaggcagtatttctaag
aagtttgtctgtgacgacggcattagcattgtcaacttcaagcttattcccgactgccct
gacttcgtggtcttcattacatcgacagagactgtgtttatatggagcgtggcggacgag
tcagtctgcagacgcgtccagctgcctactaacttcctcaaaaatctggaagacttccag
atttcaccaaatgggaaactgggcattgtctccaagggcgacgagaacattaacgtgttg
gaccttcacagcgggaagctgaggctcgttcacgccgccggtatcatctggcggcagaag
ctgtccagggacgggcgctacctggtctacatctgcttccggaactgcgatgaagatgac
gaagcgggtgtggtgtccaacctgatcgtgatgcgtctggcggatggaaagagcatcggg
acatgctccctctacaagacgcccaccttcctctgcctgtcccagcgggcactcaacatc
atcatcggcttcgaggacggtagcatcagcacctacacggtggtggaccgcgtggacgcc
gcactcaagatcaagattgccacgtccaacagccggcagatcgtcaacaacgcctcgcag
aaggtaaggcccaagtgcggcaaccacactttcaagaccatcgccgactgcgtgtggagg
gagtccactgaagtcttctccagggatagccccatcaatgtgtctgactcaggggagcca
gaaaccaccactcccaccaaaaagagtgaactgttgcagtga
DBGET
integrated database retrieval system
