Oncorhynchus nerka (sockeye salmon): 115116640
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Entry
115116640 CDS
T07952
Name
(RefSeq) rho guanine nucleotide exchange factor 4-like isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
115116640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115116640
Membrane trafficking [BR:
one04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
115116640
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_2
SH3_9
Motif
Other DBs
NCBI-GeneID:
115116640
NCBI-ProteinID:
XP_029500992
LinkDB
All DBs
Position
Unknown
AA seq
647 aa
AA seq
DB search
MRTQQSSEGPVPGDSSGSASSGLSLGSPGSDSDSGTPTEGGGKGVGGGMGEKWGAGGGGG
GGGMGSLGGTLRGVLSHYWSLESLHSTTVPDGGGEKTSLGLSDDLGSDEDLFEDFRSSRH
HFGHPGGGGEQLAINELISDGSCVYAEALWDHVTMDDQELGFKAGDVIEVVDATNKEWWW
GRILDSEGWFPASFVRLRVNQDEPMEEYLAQLEKPGAGENDQPGVGLFLGPGLPCKEQMR
TNVINEIMITERDYIKHLKDICEGYIKQCRKRIDMFTEEQLLCIFGNIEDIYRFQKKFLK
GLEKRFNKEQPHLSEIGSCFLEHQTDFQIYSEYCNNHPNACVQLSRRMKTNKYVFFFEAC
RLLQKMIDISLDGFLLTPVQKICKYPLQLAELLKYTNPQHRDYRDVEAALNAMKNVARLI
NERKRRLENIDKIAQWQRSIEDWEGEDILSKSSDLIFSGELTKISQPQARSQQRMFFLFD
HQMVYCKKDLLRRDMLYCKGRMDMDQMEVVDVEDGKEKDFNVSVKNALKLCSLAGDEVHL
LCAKKPEQKQRWLRAFQDERRQVQHDRETGFSITEVQKKQAMLNACKSHPAGKPKAMTRP
YCDFLLRQKQPSLPSSVPQQKVFMLAEPKRKATTFWQNIGRLTPFKK
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgcggacccagcagagctctgaggggcccgtgcccggggacagcagtggcagcgccagc
tctggactttcccttggatctcctggttcggactcggacagcggtacccccaccgaggga
ggtggaaaaggagtaggaggagggatgggggagaaatggggagcaggaggaggaggagga
ggaggagggatggggagcctaggaggtactctcagaggggtcctctcacattattggagc
ctggagagcctccactccaccactgtaccagacgggggtggagagaagaccagtctgggg
ctgagtgatgatctaggcagtgacgaggacctgtttgaagacttccgcagctccagacat
cactttggacacccagggggaggtggggaacaactggccataaatgagctgattagcgat
ggcagctgtgtgtacgccgaggcgctgtgggaccatgtcactatggacgaccaggagctg
ggcttcaaggcgggggatgtcattgaggtagtggatgccaccaacaaagagtggtggtgg
ggacgcattctggacagtgagggctggttcccagccagcttcgtccggttgcgtgtgaac
caggatgagcctatggaggagtacctagcccagctggagaagcctggggctggggagaat
gaccagccaggcgtgggcctgtttctgggaccaggcctgccttgtaaggaacagatgagg
actaatgtcatcaatgagatcatgatcacagagagagactacatcaaacacctcaaagac
atctgtgagggttacatcaagcagtgtcgtaagaggatagacatgttcacagaggagcag
ctgctgtgtatcttcggaaacatcgaggacatctaccgcttccagaaaaagttcctgaaa
ggtctggagaagaggttcaacaaggagcagccgcacctcagcgagatcggttcctgcttc
ctggaacatcaaacagacttccagatctactcggagtactgtaacaaccaccccaacgcc
tgtgtgcagttgtcccggcggatgaagaccaacaagtacgtgttcttcttcgaggcttgt
cgtctgctgcagaagatgattgacatctcgctggatggcttcctgctcacgcccgtccag
aagatctgcaagtaccctctgcagctggccgagttacttaaatacaccaacccccagcac
agggactatagggacgtggaggctgccttgaacgccatgaagaacgtggccaggctgatc
aacgagaggaagcgacgcctggagaacatcgacaagatcgcccaatggcagcgctccata
gaggactgggagggagaagatatcctcagtaaaagttcagatctgatcttctctggagag
ctgacgaagatctcccagcctcaggctaggagccagcagcgcatgttcttcctcttcgac
caccagatggtctactgcaaaaaggacctcctgcgcagggacatgctgtactgtaagggt
cgtatggacatggaccagatggaggtggtggatgtggaggacgggaaggagaaggacttc
aacgtgtcggtgaagaacgctctgaaactgtgctcgctggcgggtgacgaggtccacctg
ctgtgtgccaagaagcctgagcagaaacaacgctggctccgagccttccaggacgagagg
aggcaggtgcagcacgaccgcgagacaggattctctatcactgaggtccagaagaaacag
gccatgctcaacgcctgcaaaagccatccagctgggaagcccaaagcgatgacacggccc
tattgtgacttcctgctccgtcagaagcagccatctctgcccagcagcgttccccagcag
aaggtcttcatgctggctgagcccaaacgcaaggcaaccaccttctggcaaaacatcggc
agactgacgcctttcaagaagtga
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