Oncorhynchus nerka (sockeye salmon): 115116845
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Entry
115116845 CDS
T07952
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115116845
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115116845
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
115116845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115116845
NCBI-ProteinID:
XP_029501177
LinkDB
All DBs
Position
Unknown
AA seq
644 aa
AA seq
DB search
YVWTIYFLISLRVCYQINGCDVQDRQEAFTLLSNEESRSIVLLVTRPEEAWLDEEHNELL
EELKMEILEERRNEEVQKTGGGEEQAKQLEEDDVMTDTATCSSNTQDKDSGLGTGRNEES
SEQEVLLARVHRRPAQGLRDQWRAKHGQGLGRRVVVPSDTQGPRGLIQAQEGEGGVGLGL
ECDSRFKQLLELKCQIRNSGECGVYYSRRSTIECSLTEQSGVGVSGGGGMEQELRMLNDE
LRSIELECQSIMQAHQLRKNQRDPPCTPMCSPGRSPKHGREQHAKLADINEHPGERQWDS
DKLRGDKDSSSAYNTAESARSTPLGMERSPDHSLQRRISLTNQKNLRSTMAASSQSISIP
IPDRELMSETSTGPTTHSRQDPNPSPGSTVISSSPDQSNPSPSESDPALPADDERCDRTR
SHRGPRRVPPYPSPYHTAPQQGASPAHARHLQSYMQQLLQQTSSLETYSQSQLSLLSVCR
DRSTRPGEPRLEWKVKVRADGTKYVARRPARDRILRERALRIREERSGGMTTDDDTMSEM
KMGRYWSKEERKQQLARAREQRRRREYMQRSRLECLREGPGSGAEGRKEVNILELSHKKM
MKKRNKKILDNWMTIQELMSHGARAPENQGTKQVHNAFLSVTTV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
tatgtgtggactatatattttctcatctctttacgtgtgtgttaccagatcaatggctgt
gacgtacaggacaggcaggaagctttcactctcctgtccaatgaggagtccaggagtatc
gttctcctggtgaccagaccagaggaggcgtggctggatgaggagcacaatgaactccta
gaggagctgaagatggagatccttgaggagaggaggaacgaggaggtgcagaagacagga
ggaggagaggagcaggccaagcagctggaggaggatgacgtcatgacagacacggccacg
tgttcctccaatactcaggacaaagacagcggcttggggacggggcgcaacgaggagagc
tccgaacaggaagtcctcctagcccgtgtccaccggaggcctgcccagggcctgagagac
caatggagggccaagcatggccaggggctgggcaggagggtggtggtaccctcggacacc
cagggacccaggggtctgatccaagcccaggagggtgagggtggagtggggttaggactg
gagtgtgacagccgcttcaagcagctcctggagctcaagtgccagatccgtaacagcggg
gagtgtggtgtgtactatagcaggagaagcaccatcgagtgcagcctgacggagcagagc
ggggtgggggtcagtggtggtggagggatggaacaggagctgaggatgttgaatgatgag
ctgaggagtatcgagctggagtgtcagagcatcatgcaggcccaccagctccgcaagaac
caaagggatcccccctgcacccctatgtgctccccaggacgaagccccaaacatgggcgt
gagcagcatgccaagctggccgatatcaacgagcatccaggggagaggcagtgggacagc
gacaagctaaggggggacaaggacagctccagtgcctataacacggctgagagcgccagg
tccactcctctaggcatggagagatccccagaccactctctacagagacgcatcagcctc
accaaccagaagaacctccggagcaccatggcagcctccagccagtccatctccatcccc
atcccagacagagagctcatgagtgagacctcgaccgggcccaccacacacagccgacag
gatcccaaccccagccctggaagcacggtcatctccagcagccccgaccagtccaaccct
tccccctccgagtcagacccggccctgcctgcagacgacgagcgctgtgaccgcaccagg
agccaccgggggccacgcagggtccctccctacccgtccccttaccacacagccccccag
cagggcgcctctccagcccacgccagacaccttcagagctacatgcagcagctcctccag
cagacctccagtctggagacctactcccagtcccagctcagcctcctcagcgtctgccgg
gaccgctccacccgcccgggggaaccacgcctcgaatggaaggtcaaagttcgagccgac
gggacaaagtatgtagcccggcgaccggcgagggaccggattctacgagaacgggcgctg
aggatcagggaggagcgtagtggagggatgaccacggacgacgacactatgtccgagatg
aagatggggcggtactggagtaaagaggagagaaagcagcagctggccagggccagggag
cagaggaggaggagggagtacatgcagaggagccggctggagtgtctcagagagggccct
gggagcggcgccgagggccgtaaagaggtcaacatcctggaactcagccacaagaagatg
atgaagaaacgcaacaagaagatcctggataactggatgaccatccaggaactaatgagt
cacggggccagagcacctgagaaccaggggactaaacaagtacacaatgccttcctgtct
gttactacagtatag
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