Oncorhynchus nerka (sockeye salmon): 115117041
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Entry
115117041 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: receptor-type tyrosine-protein phosphatase S-like
KO
K06778
receptor-type tyrosine-protein phosphatase S [EC:
3.1.3.48
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115117041
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
one01009
]
115117041
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115117041
Enzymes [BR:
one01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
115117041
Protein phosphatases and associated proteins [BR:
one01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
115117041
Cell adhesion molecules [BR:
one04515
]
Immunoglobulin superfamily
Type II RPTP family
115117041
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
Tc-R-P
PTP-SAK
DSPc
fn3_2
Tissue_fac
Y_phosphatase3
PTPlike_phytase
V-set
Fn3_PTPRU
Ig_VEGFR-1-like_5th
Arylsulfotran_N
TraE
Motif
Other DBs
NCBI-GeneID:
115117041
NCBI-ProteinID:
XP_029501344
LinkDB
All DBs
Position
Unknown
AA seq
1964 aa
AA seq
DB search
MVPPRPGGTVAQSRATRPGYGLCLYPPCLLLPLLVLTSLPNLSGAVAAPKFTKIPGDQIG
VSGGVASFVCQASGDPKPMVNWNKKGKKVNSQRIETIEFDDGAGAVLRIQPLRAPRDENV
YECVARNSEGDVATTAKLAIIREDMLPFGFPSIDMGPQLKVVERTRMATMLCAASGIPDP
EISWFKDFLPIEPSSSQGRIKQLRSGALQIENSEELDQGKYECVATNSQGVRYSSPANLY
VREQREVRRVPPRFSILPSNHEIMPSGSINITCVAVGSPMPYVKWMLGSEDLTPEDEMPV
GRNVLELNGIRESANYTCVAMSSLGVIKATAQVSVKTLPKPPGTPIVTETTATSVTITWD
SGNPDPVSYYIIQYRAKAPDSKYETVDSITTTRYSIGGLYPNTEYEIRVSAVNSIGQGPS
STRVEARTGEQAPASPPRNVQARIISKNTVMVRWEEPEEPNGQVKGYRVYYTMDPSQPMS
LWQIHNVQDSTITSIQSLVPSETYTVRVLAFTSVGDGPFSDPVHVKVLPGVPGQPGKFKV
GKVTETSIELTWEPSYIKEGIVNYELLYKPVKFGSLEKLTFGPRASYTVEGLRANTEYSF
SLAAISNKGIGAFTNELVQRTAQAKPSAAPLGMSCDSPSSTSLRVSWTPPPTETQNGALT
AYVLRYQQVVSGAEVKGQGPEMKVPPIPPEQGQAVVEGLEKWTWYRVSLAAFTTEGSGPE
SPALLCRTDHDVPGAAPRQVEVRPFNSTALRVTWRSVLPRQRQGQIRGYQVHYARVESGS
TRSLPRIKDLLLDDSQFVEDDTTEYVNDGGGLKPEMWYSVSVAAYTTKGDGTHSKVRVVQ
TPGIVPDAPSLSVRPGSEPSMVVRWGPPTGMSDSGPGAKGSEVQIQGFRLQFGLKNATLD
TTVEFSARERMYTLTDVIPGLTYVVTLSAKSRSGYGDEAREELEMPEYPPRSYPQISEYI
NATCCSLQFSWLPPVPSERNGVITEYTIAYREAGGLNPLGIDPLGIDPLGPPRQITLPAI
ESSYTILGLNHNTGYEVQMCAHTSVGPGPFSPPLLYRTLAFETDVPRNFSVNLATKTSVL
LTWEFPESPYPYHFTVEYNRQKMEVDAKLRKAVIPNLQPDTDYDFKITSSEGNMGGLRHR
IHAKTSPPIAIRRPEIDHTRDTETTITIILPSLENRIPVKNLYVVVVPLRRARGVIRHLK
SPDEMDLEELLKDSSQRQRESRQQKQVDLRRAYISALFTPATLPAFFTLGDQLDYGGFEN
RALEPGQEYVFFILAELNGTTVKMYADSPYTEPVIAPDSDPQPLDAGDGLIWVVGPVLAV
VFIICIVIAILLYKNNKPDSKRKDSEPGTKSLLCNVEMMAHHPTDPVEMRRINFQTPGMM
SHPPIPITELAEHTEILKANDSLRLSQEYESIDPSQQFTWEHSNLEVNKPKNRYANVIAY
DHTRVVLAPIEGSSPGILGSDYINANYIDGYRKQNAYIATQGPLAETFGDFWRMVWEQRA
ASVVMMTRLEEKSRIKCDQYWPSRGTETYGMTQVTILDTMELATFCVRTFSLQKNGCNER
REVRQFQFTAWPDHGVPEYPTPFLAFLRRVKACXPPDAGPVIAHCSAGVGRTGCFIVIDA
MLERIRHEHTADIYGHVTLMRSQRNYMVQTEDQYGFIHEALLEAVACGNTEVAARSLFSY
MQKLGKVESGEHVTGMELEFKRLANTKAHTSRFVSANLPCNKFKNRLVNIMPYETTRVCL
QPIRGLEGSDYINASYIDGYRQQRGYMATQGPLAETTEDFWRMLWEHNSTIVVMLTKLRE
MGREKCHQYWPAERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTVRQFQFTDW
PEQGVPKSGEGFIDFIGQVHKTKEQFGQDGPISVHCSAGVGRTGVFITLSIVLERMRYEG
AVDIFQTVKMLRTQRPAMVQTEDEYQFSYQATLEYLGSFDHYAT
NT seq
5895 nt
NT seq
+upstream
nt +downstream
nt
atggttccccccaggccaggtggaaccgtagcccagtccagggcgactcgtcctgggtac
ggactctgcttgtaccccccttgtctgctgctgccactgctggtgctcacatccctgccc
aatctgtctggggcggtggcggcacccaagttcaccaagatccccggggaccagatcggg
gtatcggggggtgttgcctcgtttgtgtgccaggcttcaggtgaccccaaacccatggtc
aactggaacaagaagggcaagaaggtcaactcccaacgcatagagacaatagagtttgat
gatggagcgggggccgtactgaggatccagcctctcagggccccccgagatgagaatgtc
tatgagtgtgtggcccgcaacagtgagggagatgtggccaccactgccaagctggccatc
atacgagaggacatgttgccatttggtttccccagcattgacatgggtcctcagctgaag
gtggtggagaggaccaggatggccaccatgctgtgtgctgccagtggcatccctgacccg
gagatctcctggttcaaagacttcctccctatagagcccagctccagccagggacgcatt
aaacagctgcgctcaggtgccctccagatagagaacagtgaggagttggaccagggaaag
tatgagtgtgtggccactaactctcagggagtgcgttactcttccccggccaacctgtat
gtacgagagcaacgagaagtgcgtcgtgtgccccctcgtttctccatcctgccctccaac
catgagatcatgcccagcggcagcatcaacatcacctgtgtggcggtgggttcacccatg
ccctacgtcaaatggatgctgggtagtgaggacctgacacctgaggacgagatgccggtg
gggcggaacgttctggagctcaacggaatcagggagtcggccaactacacctgtgtggcc
atgagcagtctgggggttataaaggccactgcacaggtgtcagttaagactcttcccaag
cctcccggtacccccatcgtcacggagacgactgccaccagcgtcaccatcacctgggac
tccggtaaccccgacccggtgtcctattacatcatccagtaccgggccaaggcaccagac
agcaagtacgagacggtggacagtatcaccaccaccaggtacagcattggagggctctac
cccaacactgagtatgagatcagggtgtcagccgtcaacagcatcggccagggaccctcg
tccacccgggtggaggccaggacaggggagcaggccccggctagcccccccaggaacgtc
caggccaggatcatctccaagaacactgtcatggtccgctgggaggaaccagaggagccc
aatggacaggtgaaaggttaccgggtgtactacaccatggacccatctcagcccatgagt
ctgtggcagatccataatgttcaggacagcaccatcacctccatccagagcctggtaccc
tctgaaacatacactgtcagagtcctggcctttacatctgtgggagacggacccttttct
gatcctgtccatgtcaaagtgctgcccggagttccagggcagccaggaaagttcaaggtg
ggcaaggtgacggagaccagtatagagctgacctgggaaccgtcctacatcaaggagggc
atcgtcaactacgaactgctctacaaacctgtcaagttcggcagcctggagaagttgacg
tttgggcccagggcttcgtacacagtggagggtctgagggctaacacggagtactccttc
tccctggctgccatttctaacaaaggcatcggagcctttaccaacgagctggtccagagg
acagcacaagccaagccctcggctgctcccctgggcatgtcctgtgacagccccagctcc
acctccctgagggtaagttggacaccgcctcccactgagacccaaaatggcgcactgact
gcttatgtgctgcgctaccaacaagtggtgtctggggccgaggtcaaaggtcagggtcca
gagatgaaggtgcctcccatccccccagagcaggggcaggcagtggtggaggggctggaa
aagtggacctggtaccgcgttagcctggcagccttcactaccgaggggtccggaccagag
agtccagccctgctctgccgcacagaccacgacgtgccgggtgcggcccctcggcaggtg
gaggtccggcccttcaactccactgcccttagggtcacctggcgatctgtgttgccaagg
caacgccaaggtcagatccgtggttaccaggtgcactatgctcgtgtggagagtggctca
acacgcagccttccccgaatcaaagacctgctattggacgacagccagtttgtggaggat
gacactactgaatatgtgaatgatggtgggggtctgaagcctgagatgtggtactctgtg
tctgtggcggcttacaccactaaaggggatggaacacacagtaaagtcagagtggtgcag
acaccggggattgtgcctgatgccccctccctttcggtgcgcccagggtctgaaccctcc
atggtggtgagatgggggcccccaactgggatgtcagactccggtccaggggccaaaggg
tctgaagttcagatccagggttttcggttacaatttgggctgaagaatgcaaccctggac
actacggtggagttttcggccagggagcgaatgtacacactcacagacgtaattccaggg
ttgacttatgtcgttaccctttccgccaaaagccggtcagggtacggagacgaggcacgg
gaggaactcgagatgcctgagtacccacccaggagttaccctcaaatctcagaatacatt
aacgccacctgctgttcgctccagttctcctggctgccccctgtgccaagcgaacgaaac
ggtgtgatcaccgaatacacaatagcttatcgggaagcagggggtcttaaccctctgggc
attgaccctctgggcattgaccctctgggaccccctcgccagatcacgctcccagccatt
gagtccagctacaccattctgggcctgaaccacaacaccgggtacgaggtgcagatgtgt
gcccacaccagcgtaggtcccggcccgttcagtcccccgctgctgtatcgcacactggcc
ttcgagacagatgtcccgaggaatttctcagtgaacctggcgaccaagacgagtgttctc
ctgacctgggagttccctgagagcccctacccctaccacttcactgtggagtataaccgc
cagaagatggaggtggatgccaagctgaggaaagcagtgatccccaacttgcagccagat
accgactatgacttcaagatcacctcctctgagggcaacatgggcgggctgaggcaccgc
atccacgccaagacctctccaccaattgcaatccgccgtccggagattgaccacacccgt
gacacggagaccaccatcaccataatcctgccctcgctggagaatcgcatccctgtcaag
aacctgtatgtggtggtagttcctctgaggagggcgaggggggtcattagacatctcaag
agcccagacgagatggacttggaggagttgttgaaggacagcagtcagagacagagggaa
tctagacagcagaaacaggtagacctgcgcagagcctacatctcagccctcttcacccct
gctactctgccagccttcttcactctgggggaccagctggactatggaggctttgagaac
cgcgctctagaaccaggacaggagtacgtgttcttcatcttggcagaactcaatggcacc
acagtgaagatgtacgcggacagtccgtacacagagccagtgatcgctccggactcagac
ccccagcccctggatgcgggggatggtctgatctgggtggtgggacccgtcctggccgta
gtcttcatcatctgcatcgtcatcgccatcctgctctacaagaacaacaagccagacagt
aagaggaaggactccgagccaggcaccaagagccttctgtgtaatgttgagatgatggcc
caccaccccacagaccctgttgagatgagacgcatcaacttccagacccctggtatgatg
agccaccctcccattcccatcacagagctggctgaacacacagagatactcaaggccaat
gatagcctgcgtctgtctcaggagtacgagtccatcgaccccagtcagcagttcacctgg
gagcactccaacctggaggtgaacaagcccaagaaccgctatgctaacgtcatcgcctat
gaccacacccgcgtcgtcctcgcccccatagaaggttcaagtccaggtatcctgggcagt
gactacatcaatgctaactacatagacggctacaggaagcagaatgcctacatcgccaca
cagggcccgctggcagagacattcggggacttctggaggatggtgtgggaacagagagca
gcctccgtggtcatgatgaccagactggaggagaagtcacggataaagtgtgaccagtac
tggccaagccggggtacagagacctatgggatgactcaggtcaccatactggacactatg
gaactggccacattctgcgtgcgcaccttctccctgcagaagaatggttgtaatgagcgg
agggaggtacgtcagttccagttcactgcctggccagaccacggtgtaccagagtacccc
actccgttcctggccttcctacgcagggttaaagcctgcnaaccccctgacgctggtcct
gtcatcgcacactgcagtgcgggcgtgggtcgtaccggttgcttcattgtgatcgacgcc
atgctggaacggatcagacacgagcacacggccgacatctatggtcacgtgactctgatg
aggtcacagcggaactacatggtgcagacggaagaccagtacggcttcatccacgaggcg
ctgctggaagcagttgcttgtgggaacacggaggtggcggcccggagcctgttctcctac
atgcagaagctgggcaaggtggagagtggagagcatgtcactggcatggagctggagttc
aagcgtctggccaacaccaaagcccacacgtctcggttcgtcagtgccaacctgccatgt
aacaagtttaagaaccgcctggtcaacatcatgccctatgagaccacccgcgtctgtctg
cagccaatccgaggtctggaaggatcagattacatcaacgccagctacattgatggatac
aggcagcagagaggttacatggccacccagggcccactggctgagaccacagaggacttc
tggaggatgctgtgggaacacaactctaccatcgtggtcatgctcactaaactgagagag
atgggacgggagaagtgccatcagtactggcccgcagagcggtctgctcggtaccagtac
tttgtagtggatcccatggctgaatacaacatgcctcagtacatcctcagagagtttaag
gtcaccgatgcaagggatggccaatcacggacagttcgtcagttccagttcaccgattgg
ccagagcagggagttcctaaatctggagagggcttcatcgacttcattggccaggtgcac
aaaaccaaggagcagtttggacaggacggcccaatcagtgtccactgcagtgcgggtgtg
gggcggaccggagtcttcatcactctgagtatcgttctggagaggatgcgttacgaggga
gctgtggacatcttccagactgtcaagatgctgaggacacaacgccctgccatggtacag
acggaggatgagtaccagttctcctaccaggctaccctggagtacctggggagttttgac
cactatgcaacctaa
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integrated database retrieval system
