Oncorhynchus nerka (sockeye salmon): 115117051
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Entry
115117051 CDS
T07952
Name
(RefSeq) histone deacetylase 6-like
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
one01009
]
115117051
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115117051
04131 Membrane trafficking [BR:
one04131
]
115117051
03036 Chromosome and associated proteins [BR:
one03036
]
115117051
Enzymes [BR:
one01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
115117051
Protein phosphatases and associated proteins [BR:
one01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115117051
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
115117051
Membrane trafficking [BR:
one04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
115117051
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
115117051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
115117051
NCBI-ProteinID:
XP_029501354
LinkDB
All DBs
Position
Unknown
AA seq
652 aa
AA seq
DB search
MCLICVCSLEHIAKIKATEGMKTRDLHRLGDEYNSIFISTESYRSARLAAGACFNAVQAV
LTGQVEHYLPIVRPPGHHAEKDAACGFCFFNTASLTARYAQSISQKPLRVLILDWDVHHG
NGTQHIFEEDDSVLSRTNSNPAARSIQCASPVPNSNPPLSGHIHVLAARNGKRMKNEKRG
TVSFHSVVMPIAREFDPGLVLVSAGFDAARGDPLGGYQVTPPGYAHLTHLLMGLAGGRVL
VILEGGYNLTAISESMSACTSILLGDPALPLPPLPPPHPNAAVSINKVIRTHSVYWLSLR
IQLPESLRLSLPNPKPRGKRTSKGKKSPRQGNQGGASPGQGSPQTTPQTTSQTTPLTTPQ
TTPLTTPLTTPQTTPQTTPQTTPQTTPQTTPLTTPLPSGDRGDLDLDDLTKGLVSLDLNQ
STSANPSPASVPVGGARSKVRLSPMKSPVVKEVKTEAVPNTPEILQPTPDETETPAVAMA
ASDPVTKGDQESGAVEVEGASGYSKEPVFELFCGNQDVDWSTMYVVDPLSWCPHLDSVRP
VPVGGIDVFRPCEDCGTDTENWICLCCYKVYCGRYVNQHMLTHGVASEHRLVLSFADLSV
WCYSCQAYVHNQVRGQIGKVCNTTLFIFTSSLFACKCPQFRYKFLLILLAFW
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgtgtctaatctgtgtctgtagcttggagcacatagccaagatcaaggccacagagggg
atgaagacgagggaccttcacagactgggagatgagtacaactctatcttcatcagtact
gagagctacaggagcgcccggttggccgctggggcctgctttaatgcagtacaggctgtt
ctgacgggacaggttgaacattacctccccatagtgcgcccccctggtcaccatgccgag
aaggatgctgcctgtgggttctgtttcttcaacaccgcctccctgactgcccgatacgcc
cagtccatctcccagaagcccctgcgggtcctcatcctggactgggatgttcaccatggc
aacggaacacagcacatcttcgaagaggatgacagtgtcctctcccgcacgaactccaac
cctgctgctcgctccatccagtgtgcctctcccgtccctaactccaacccgcccctctca
ggtcacatccatgtcctggctgcccgcaacggtaaacggatgaagaacgaaaaaagaggt
acagtatccttccactcagtggtcatgcccatcgctagagagtttgacccgggcctggtt
ctggtatcggcagggtttgatgcagccagaggcgaccctctaggagggtaccaagtgacc
cccccgggctatgcccacctcacccacctcctgatgggcctggcaggcggcagagtattg
gtcatcctggagggtggttataacctgactgccatttcggagtctatgtctgcctgcacc
agcattctcctgggagaccccgctctgcccctgcctcccttgcccccacctcaccccaac
gcagcagtcagcatcaacaaggtcatacgcacccactccgtctattggctgtccctcagg
atacaacttccagagtctctccgtctgtctctgccaaaccccaaaccccgagggaagagg
acttctaagggcaagaagtctcccagacagggtaaccagggcggagccagccctggtcag
gggtcacctcagaccacacctcagaccacatctcagaccacacctctgaccacacctcag
accacacctctgaccacacctctgaccacacctcagaccacacctcagaccacacctcag
accacacctcagaccacacctcagaccacacctctgaccacacctctgccctctggcgat
cggggcgaccttgacttagatgacctcacaaagggactggtgtcactcgacctaaaccaa
agtacctcagccaatcccagcccagcgtctgtccctgtgggtggagccaggtcgaaggtg
aggctcagtcctatgaagagcccagttgttaaagaggttaagacggaagctgttccaaat
acgcccgagattctccaaccaacgcctgacgagacagagacgccggcggtcgccatggct
gcctcagacccagttaccaagggagaccaggagagcggtgcggtggaggtggaaggggcg
tctggttactccaaggagccggtgtttgagctgttctgtggaaaccaggatgttgactgg
agcaccatgtacgtggtggatcccctgtcctggtgcccccacctagactcagtgaggcct
gttcctgttggaggtatagatgtgtttcggccctgtgaggactgtggaactgacactgag
aactggatctgtctctgctgctacaaggtgtactgtggtcgctatgtcaaccagcacatg
ttaacccacggcgtggcgtcagaacaccggctggtgctgagcttcgctgacctgtcggtg
tggtgttactcctgtcaggcctacgtccacaaccaggtgagaggtcaaatcggaaaagtt
tgcaacacaactttgttcattttcactagttcacttttcgcttgtaaatgtccacaattt
cgctacaagtttttgctaattttgttagcattctggtaa
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