Oncorhynchus nerka (sockeye salmon): 115117146
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Entry
115117146 CDS
T07952
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4-like
KO
K13305
E3 ubiquitin-protein ligase NEDD4-like [EC:
2.3.2.26
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04120
Ubiquitin mediated proteolysis
one04144
Endocytosis
one04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115117146
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115117146
09144 Cellular community - eukaryotes
04530 Tight junction
115117146
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115117146
04121 Ubiquitin system [BR:
one04121
]
115117146
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
115117146
Membrane trafficking [BR:
one04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
115117146
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
HECT type E3
115117146
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
CEP164_N
Motif
Other DBs
NCBI-GeneID:
115117146
NCBI-ProteinID:
XP_029501472
LinkDB
All DBs
Position
Unknown
AA seq
1406 aa
AA seq
DB search
MSHRLRLYFGSGRSNTAPEMEELEGPSQAQTQTQDGNDVAMTFHMQQPHRPQRWSSPEST
TFSWCPERDLPMSAFSVPWQRPERGIYFGPRPVSESPLAGHVGPGDSSLKRSSSMFIPQL
TSAEPRPTKSSSMQISLQRSSGPGPVGAEEPPPCPPPSYTPGPAPAYTEPDRNYHYALPP
PPPHYCREASSTVRSPPPHYSREASSTVSSPPPHYCREASSTVSSPPPHYCREASSTVSS
PPRYSREASSTVSSPPHYSREASGSYSSAMPHNGNQQPTEPAQPKRRVFCVTPQDGSNSS
GQVSSAMSNGNGGSPGISIGSFHISRNSSDGSEVQQFRIGYGSGNQGAGPCRWSVQQQNS
DPGQPGTTQRRVVFQLGQQDQARQANNMNLVATSEPTDLGFTGSKGGRVVRYPKIRLERS
SSHQRLPRGNHQTFGDIGDPQGIEGNPSEMDGQSMDIEDGCTFNIRREPRKQQPHFKISF
SQNGDPPTVQDISLGNGQTRDDFLGQVDVPLNHLPTEDPTMERPYTFKDFLLRPRSHKSR
VKGYLRLKMAYLPKTGSPEEETTEGITREEAEGWEVNDSADPSVQRPQAVQPPLPPGWEE
KVDNLGRTYYVNHNNRYTQWKRPSNVDDVSEVENDNQQRANSIQAHRVFRSRRHISEDLE
NEHTEPRDMEDSWEPITEESPDGPLPGPSSSMATAIPQTPAPPPLQEFSEEINLHLSLSP
TPSGPPPDINGEVAAPSHASAVQSHLTSRLRSSSMTDGVSDQAQPPPPASSQTRRTRALT
VTGVEEPMSQSTAYALTTPGLPPGWEERKDAKGRTYYVNHNNRCTTWTKPILQHTEDEAS
TSDSGAAAEAASTSSSANNNSHLIEPQIRRARSLSSPTVTLSSPLEGAANNIAVRRAVKD
TLSNPQSPQPSPYSSPKSGHQSQQSFLPPGWEMRIAPNGRPFFIDHNSRLTTWEDPRLKY
PVHMRTKASLDPGDLGPLPVSKVYNLFSITIFLTVILSPSDTKATQWEDPRLQSPAITGP
AVPYSREFKQKYDYFRKKLKKPADIPNRFEMKLHRTNIFEESYRRIMSLKKPDILKARLW
IEFESEKGLDYGGVAREWFFLLSKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSY
FKFIGRVAGMAVFHGKLLDGFFIRPFYKMMLGKQITLKDMESVDSEYYNSLKWILENDPT
ELDLRFCIDEDNFGQTYQVDLKPSGGDMVVTNHNKMEYIDLVIQWRFVNRVQKQMNAFLE
GFTELTLIDLIKIFDENELELLMCGLGDVDVNDWRQHTVYKNGYCPNHPVIQWFWKAVLL
MDAEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLFTIEQWGTPDKLPRAHTCFNRLDLP
TYESFDDLRERLLMAVENAQGFEGVD
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaccggctgcgtctgtactttggctctggccgcagcaacacagctccagaaatg
gaggagctggaagggccgtcccaggcccagacccagacccaggacggcaacgatgtcgcc
atgacattccacatgcagcagcctcaccggcctcagcgctggagcagcccagaatcaact
accttctcctggtgtcctgagagagatctgcctatgagtgccttctctgtgccttggcaa
cggcctgagagagggatctactttgggcctcgtcctgtgtctgagagccccctggctggt
catgtaggtcctggagactcctcactcaaacgaagctcctccatgtttataccccagctg
acttctgccgagccacggcccacaaagagttcctctatgcagatctctctccaacggtcc
tccggtcctgggcctgttggagctgaagagccaccaccatgtccgccacccagctacacc
ccgggacctgctccggcctacacagaaccagacaggaactaccactacgctctaccacca
ccaccacctcactactgccgagaggcttcatctacggtcagatcaccaccacctcactac
agccgagaggcttcatctactgtcagctcaccaccacctcactactgccgagaggcttca
tctactgtcagctcaccaccacctcactactgccgagaggcttcatctacggtcagctca
ccacctcgctacagccgagaggcttcatctactgtcagctcaccacctcactacagccga
gaggcttcagggagctacagttctgccatgccacataatgggaatcaacagcccacagag
ccggctcaacccaagcgaagggttttctgcgtcacaccccaagatggctcaaactcaagc
ggtcaggtcagctcagctatgtctaacggaaatggaggctcaccgggaatcagcattgga
agcttccacatctcaaggaactcctcagatggatctgaagtccagcagttcaggatcggc
tatggatctggcaatcaaggagctgggccctgccgctggtccgtccagcagcagaactct
gacccgggccaacctggcaccactcaaaggcgggttgtgttccagcttggacagcaggac
caagccagacaggccaacaatatgaaccttgtggccactagtgagcccaccgatctgggt
ttcactggctccaagggagggcgtgtggtacgttaccccaagatccggctggagagaagc
tcttcgcatcagcggctgccccgtgggaaccaccagacattcggtgatattggggatcct
cagggcattgaaggaaacccttcagagatggacggtcaaagtatggatattgaagatggc
tgtactttcaacatcaggagagaaccccgcaagcagcagcctcacttcaagatttctttc
agtcagaatggtgatccccctaccgtacaggatataagcctgggaaatggtcagacgagg
gacgatttcctgggacaggtcgatgtgcctctcaatcatttaccgaccgaggaccctacg
atggagcggccgtacacgtttaaagatttcctcctacggccacgaagccacaagtcccgg
gtgaagggttatctacggctaaagatggcctacctgccgaagactggaagtccggaggaa
gagaccactgaagggattaccagggaggaggcagagggctgggaggtgaacgactctgcc
gatcccagcgtccagaggccccaggctgtccagcccccactgcccccaggatgggaggag
aaggttgataacctgggcagaacctactacgtcaaccacaacaaccgctatacacagtgg
aaacgacccagtaacgtggatgatgtttcggaggtggagaatgacaatcagcagcgggcg
aacagcatccaggcccaccgggttttcaggtctagacgacacatctctgaagacttggag
aacgaacacacagaacccagagacatggaagattcgtgggagccaatcactgaagagagt
ccagacggccccctacctggcccctcctcctcaatggcgacggccatcccccaaacgcct
gcccccccacccctccaggagttctcagaggagatcaacctgcacctatctctctctcca
accccatccggccccccgcctgacatcaacggagaggtggccgcccccagccacgcctct
gctgtgcagagccatctgacctccaggctgcgctcctccagtatgacagatggggtcagt
gaccaggcccagcctcctcctccagcgagctcccagaccagaagaaccagagctctaaca
gtcactggagttgaggagcccatgtctcagtcgacagcctatgccctgaccacaccaggc
ctacctccaggatgggaggagaggaaggacgccaagggacgcacgtattacgtcaatcat
aacaaccgctgcaccacctggaccaagcctatcctccagcacactgaagacgaagcgagt
acgtctgactccggggctgcagctgaagccgcctccacctcttcctcagccaacaacaat
agtcatctgattgaaccacaaatacgccgcgcccgtagtctcagttcccctaccgttacc
ctgtcctcccccttagagggggcggccaacaacatagctgtgcgtcgggcagtgaaggac
accctctccaacccccagtccccccagccctccccctacagctccccaaaatcaggacat
cagtcccagcagagcttcctgcccccggggtgggagatgaggatagcacccaacggaaga
cccttcttcattgaccacaacagcaggctcaccacatgggaggacccgaggttgaagtat
ccagtccacatgagaacaaaagcctctctggaccctggtgacctggggcctcttcctgta
agtaaagtttataacctctttagtataaccatattcctgactgttattttgtcaccttca
gacaccaaagccactcaatgggaggatcctcgtctacagagtcctgctatcacagggcct
gctgtgccatactctagagaattcaaacagaaatatgattacttcagaaagaagttgaag
aaaccggcggacatccctaacaggtttgagatgaagctgcacaggaccaacatctttgag
gagtcgtatcgccgtatcatgtctctgaagaaaccagatatcctgaaggcccgcctctgg
atcgagtttgagtcagagaaggggctggactacggaggtgtggccagggagtggttcttc
ctgttgtctaaggagatgttcaacccttactatggactcttcgaatactcagccacagat
aactacacactacagatcaaccctaactctgggctgtgtaacgaggaccacctctcatac
ttcaagttcattggtcgagtggcagggatggccgtgttccatgggaagctattggacggc
ttcttcatccgaccattctacaagatgatgctcgggaagcagatcacactgaaagacatg
gaatcagtggacagtgaatactacaactctctgaagtggatcctggagaatgatcctact
gagctggacctgcggttctgtatcgatgaggataactttggacagacgtatcaggtggat
ctgaaacccagtggtggggacatggtggtgaccaaccacaacaaaatggaatacatcgat
cttgtcattcagtggaggtttgtgaaccgggtccagaaacagatgaatgccttcttggag
ggattcactgaactcactctcatcgacctcatcaagatatttgatgaaaacgagcttgag
ctgttgatgtgtggtctgggtgacgtggatgtgaatgactggcgacaacacaccgtctac
aagaacggttactgccccaaccacccagttatacagtggttctggaaggctgtcctactg
atggatgctgagaagaggatccgtctgcttcagtttgtcaccgggacatccagagtccct
atgaacggcttcgctgagctctatggttccaatgggcctcagctgttcaccattgagcag
tggggcacacctgataagctgcccagagcacacacctgcttcaacaggctggacctgcct
acctacgagtcgtttgatgacctccgagagaggctgctgatggctgtggagaacgctcag
ggctttgagggcgtcgattaa
DBGET
integrated database retrieval system
