Oncorhynchus nerka (sockeye salmon): 115117216
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Entry
115117216 CDS
T07952
Name
(RefSeq) lipopolysaccharide-responsive and beige-like anchor protein
KO
K24181
lipopolysaccharide-responsive and beige-like anchor protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115117216
Membrane trafficking [BR:
one04131
]
Endosome - Lysosome transport
Others
Others
115117216
Endosome - Golgi transport
115117216
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
115117216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4704
DUF1088
PH_BEACH
Motif
Other DBs
NCBI-GeneID:
115117216
NCBI-ProteinID:
XP_029501543
LinkDB
All DBs
Position
Unknown
AA seq
1834 aa
AA seq
DB search
MYSSLLQDVKAVVTHSVQSAIHSIGGVQVLFPLFAQLDHLQHTSDELDTSVCCTLLSFVM
ELLKNSVAMQEQVLACKGFLVIGYTLEKSSKVHVTRSVLDIVLAFARYLSNLQNGVLLLK
QLCDHILFNPAIWIHAPAKVQLVLYTYLSTEFISTVTIYNAIRRVGTVLQVMHTLKYYYW
VVNPQDRSGVTPKGLDGPRPNQKEIHSLRAFLLLFVKQLIMKDYGVKEDELQSILNYLLT
MHEDDNLLDVLQLLVALMSEHHGSMVQAFDQRNGVRAIYKLLASNSEGIRVQALKVLGYF
LKHLPAKRKSEVMLGHGLFSLLNERLMLHSNQFSMTTYNVLFEILTEQICTQVIHKQHPD
PDSNVKIVNPQVLKVIAALLKNSPLSPESMEVRRVFLSDMIKLFNNSKDNRRSLLQCSVW
QDWMLSLCFINPKSSEEQKVTEMVYAIFRILLYHAIKYEWGGWRVWVDTLSITHSKVTFE
QHKENLARMFRQYQRLGSEGDAARIRTISGASRDSEILGQLRTNRDQGEETAPSTVIELT
IDPEGVPQNQESPNTTPPSETSTASASTPSPPEREGDRSQRGQAPITVSNMLARAEEEEE
LQQVQNQISEDQRGGAGDRAEVTTQETEAKLTGDKVSSKTVEAMAETETATDKTDEAAAA
STAETDEATRPETEDAKVAKSETSDDATTSDTDKVVRPQTDGEKGSETHSRKASNVLMSE
DSLNEPKEPELAKRPEGQVSAVISACQEGSVAEGSAVGASVQSVSDQVRPSSTDDSMEES
SFVSAAGGEEEEKEEEEVKTEEVVVEEEKMEEVKAEEIKTEVKTGTEKEEESVAKVTKSA
VESPATPPASVPEESQTQPPKMEEIDLNPSAPGTDPTSTEPAWQPLESTTSPPSALEAIL
PAAVGATVSKSDTPQAVAPAEAPSTKGFQPEAPQATEAPSSRTDTSPKVATATAVEAGKD
SAAEGPGSATKTKEIHIARLDVSSVASDTERLALKETSTPEVPQGDAAGASGGQASESSS
SARSTMFRIPEFRWSHMHQRLLTDLLFSIETDVQTWRSHSTKTVMDFVNSSENVVFVHNT
VHLISQVVDNLIMSCGGILPLLSAATSSSHDLENIEPSQGLSVEASVTFLQRLINLVDVL
IFASSLNFTEIEAEKNMSSGGILRQSLRLVCAMAVRNCLECQQQSHFKPSQDSARGQQAV
HSLMGTAKSMPTQSPVDVVAGGMSPIRDMDRLLQEMDINRLRAVVFRDIEDSKQAQFLAL
AVVYFISVLMVSKYRDILEPQNDKKLPQRSQSARSADSNAVSGGPDLESSVSLRRRDSGI
GDDHSSVAPSEADTTAQGPDAVSEALSTLSSEVRGHRDNPTADARGGKNVKDILRSLVSA
PADDIMVDPSLLPPAFLGAAMGNNPNQFRSFDRSVRVAPKKVGGAPSPGSSTPVPSATAA
VAATGTPVNNVAVVSTGDASQSTTAEAAAGESQTLGGSASANLPSVPTLSPMTRDTAPSM
SISERLEHALDKAAPLLREIFVDFAPFLSRTLLGSHGQELLIEGTSLVCMKSSSSVVELV
MLLCSQEWQNSIQKNAGLAFIELVNEGRLLSHTMKDHLVRVANEAEFILSRQRAEDIHKH
AEFESHCAQYSAEKRDEEKMCDHLIRAAKYRDHVTATQLIQKIVNILTDKHGAWGSSAFS
RPREFWRLDYWEDDLRRRRRFVRNPFGSTHSKATLKAAAEHVVPGINAPEEDILLGKQSI
RSHAMGNHNSESEILLDGDDDTLSSLEEKELENLTGPVNMSTSAQLVAPAVVVKGTLSIT
ASELYFEVDEDEASFKTIDPKHIQAMLFYSLIAL
NT seq
5505 nt
NT seq
+upstream
nt +downstream
nt
atgtattcctcccttcttcaggatgtgaaggctgtggtgacccactcggtccagagtgcc
atccactccatcgggggagtgcaggtcctcttccccctgtttgcacagctggatcacctc
cagcacaccagcgatgaactggacacctctgtctgttgcactttgctgtcctttgtgatg
gagctgctgaagaactctgtggctatgcaagagcaggtcctggcttgcaagggcttcctg
gtcatcggttacaccctggagaagtcttccaaggtgcatgtgactcggtccgtcctggac
atcgtgctggcctttgcccgttacctcagcaacctgcagaacggcgtcctgctgctcaag
cagctgtgtgaccacatcctgttcaaccctgccatctggatccatgcccctgccaaggtg
cagttggtgttgtacacttacctgtccaccgagttcatcagcacggtgaccatctacaac
gccatccgcagggtgggcacggtgctgcaggtcatgcacacgctcaagtactactactgg
gtcgtcaacccccaggaccgcagcggagtcacgcccaagggcctcgacggtccgagaccc
aatcagaaggagatccactctctcagagcctttctgctgctgtttgtgaaacaactcata
atgaaggattacggagtgaaggaagatgagcttcagagtattctcaactacctgctcacc
atgcatgaggacgacaatctactggatgtgcttcagctgctggtggctctgatgtcggag
catcacggctccatggtgcaggcctttgatcagcgcaacggagtacgggccatttacaag
ctgctggcttccaacagtgaaggaatcagagttcaggcactcaaagtcttgggctacttc
ctcaaacacttgcccgctaagaggaagtcagaggtcatgctgggtcacgggctcttctcc
ctgctcaacgagcgactgatgctccactccaaccagttcagcatgacaacctacaacgtg
ctcttcgagatcctgaccgagcagatctgcactcaagtgatccataaacagcatccggac
cccgactccaatgtgaagattgtcaacccgcaggtcctgaaggtgatcgctgccctgctg
aagaactctcccctctccccagagagcatggaggtgcgcagggtcttcctgtcagacatg
atcaaactgttcaataacagcaaagataacaggaggagcctgctgcagtgctcggtgtgg
caggattggatgctctctctgtgcttcatcaaccccaagagcagcgaggagcagaaggtc
actgagatggtgtacgccatcttccgcatcctgctctaccacgccatcaagtacgagtgg
ggcggctggcgcgtgtgggtggacaccctgtccatcacccactccaaggtgacctttgag
cagcacaaggagaacctggcccgtatgttccgtcagtaccagagactgggctccgagggc
gatgcggctcgtatccggaccatttccggggccagccgagactctgagattctgggccag
ctccggaccaacagggatcagggggaggagaccgccccctccaccgtgatcgagctcacc
attgacccagagggggtcccccagaaccaggagtcccccaacactacccctccctcagaa
acctcaacagcatctgcctccacccccagccctccagagagagaaggagatagaagtcag
aggggtcaagcacccataactgtgtccaacatgctggccagagctgaagaagaggaggaa
ctacagcaggtccagaatcagatctctgaagatcagagaggtggtgctggtgacagagcc
gaagttactacccaggagactgaagctaaactcactggggataaagtcagcagtaagacc
gttgaggccatggctgagactgagacagccacagacaagactgatgaagctgcagcagct
agcacagctgaaacagacgaagcgaccaggccagaaactgaagacgctaaggtggctaaa
tcagaaacaagtgacgatgctacaacatctgataccgacaaagtagtaagacctcaaacg
gatggagagaaggggtcagaaacgcacagccgcaaagcctccaacgttcttatgtctgaa
gattccctgaacgaacccaaggaaccggaactcgcaaagcgaccggagggacaggtctct
gctgtcatctcggcctgccaggagggcagcgtggcggaggggtcagcagtcggggcatct
gtccagtcagtcagtgaccaggtccgacccagctccaccgacgacagcatggaggaatcc
tcttttgtctccgccgctggtggagaggaggaagaaaaggaggaagaggaggtgaagaca
gaggaggttgtagttgaggaggagaagatggaagaggttaaagcagaggagatcaagact
gaggttaaaactggaacggagaaggaagaggagagtgttgccaaggtcacaaagtcggca
gtggaaagtccagccacaccacctgcttctgtacctgaggagagtcagacacaaccccct
aaaatggaggagattgaccttaacccgtctgcaccaggcaccgaccccaccagcacagag
ccagcatggcagcctttagagtccacaacatcacccccttcagccctggaggccatacta
ccagcagcagtaggggccactgtctctaaatctgacaccccacaggctgtggcaccagca
gaggcccccagcaccaaggggttccagccagaagccccacaggccacagaggcccccagc
tccaggactgatacctctccgaaggtagccactgctactgctgtggaggcagggaaagac
agtgcagcagagggccctggctctgccaccaagaccaaagagatccacattgccaggctg
gatgtgtccagtgtggcctcagacacagagagactggctctaaaggagacctccacacct
gaagttcctcagggtgacgcagccggtgcctcaggaggccaggccagcgagagcagctcc
tccgctcgctccaccatgttccgtattccagagttccgttggtctcacatgcaccagcgc
ctgctcacagacctgctcttctccatcgagactgacgtgcagacgtggaggagtcactcc
actaagacggtgatggactttgtgaacagcagtgagaatgtggtgtttgtccacaacaca
gtgcacctcatctctcaggtggtggacaacctcatcatgtcctgtggaggcatcctgccc
ctgctttctgctgccacatcctcctcacatgatctggagaacattgagccgtcccagggt
ctgtcggtggaggcctctgtcaccttcctgcagcgcctcatcaacctggtggatgttctg
atcttcgcctcctccctcaacttcaccgagatcgaggctgagaagaacatgtcctctggc
ggtatcctcagacagagcctccgcctggtgtgtgccatggctgtgaggaactgtctggaa
tgtcagcagcagtctcacttcaagcccagccaggacagcgcccgcggccagcaagctgtg
cacagcctcatgggaaccgccaagtccatgcccacgcagagccctgttgatgttgtggca
ggagggatgtctcccatcagagacatggaccgtctgctacaggaaatggacatcaaccgc
ctcagagccgtggtcttcagagatatcgaggacagtaagcaggctcagttcttggccctg
gccgtggtttacttcatctctgttctcatggtgtccaagtaccgagacatcctggagccc
caaaacgacaagaaactcccccagcgcagccagtctgccaggagcgcagacagtaatgcc
gtctctggcggtcccgacctggagagcagtgtgtccctccgtcgccgagactctggcatc
ggggatgaccatagctccgtggcccccagcgaggcggacaccaccgcccaggggcccgac
gccgtgtccgaggccctgtccaccctctcctcagaggtcaggggtcacagagacaacccc
acggcggacgccaggggcgggaagaacgtgaaggacatcctgcgcagcctggtctcggcg
cctgctgatgacatcatggtggaccccagccttctgccgccggccttcctgggagctgct
atgggaaacaaccccaaccagttcagatcctttgacagaagcgttcgggtggcacccaag
aaggtgggtggggctccgtccccaggctcctccactcctgtcccatcagccaccgctgcc
gtggcggctaccgggacaccagtcaacaacgttgccgtggtttccacgggcgatgcctcc
cagagcaccaccgctgaggctgcagccggtgagtcccagacattaggaggatcagccagc
gccaacctgccatctgtccccacgctgtccccaatgacccgggacacagcccccagtatg
agtatctcagagagactggagcatgctctggataaggctgcccccctactgagagagatc
tttgtggactttgcccccttcctctctcgcaccctgctgggtagtcacggacaggagctc
ctcatcgagggcaccagtctggtgtgtatgaagtccagcagttcggtggtagagctggtc
atgctgctctgttctcaggagtggcagaactctatccagaagaacgcaggcttggccttc
atcgagctggtcaacgagggcaggctactgagccacaccatgaaggaccacctggtgcgg
gtggccaatgaggctgagttcatcctgagccgacagagagccgaggacatccacaaacac
gctgagtttgagtcccactgtgcccagtactcggctgagaagcgtgatgaggagaagatg
tgcgaccacctgatccgagcggccaagtaccgcgaccacgtgacagccacccagctcatc
cagaagatcgtcaacatcctgacggacaaacacggtgcctggggaagctctgccttcagc
cgtcctcgggagttctggcgcctcgactactgggaggacgacttgaggcggcgccggcgc
ttcgtcaggaaccccttcggatccactcactcaaaggccacgctcaaagctgcagccgaa
cacgtggtgcctggcattaatgctccggaggaagatatcctccttggcaaacagtcaatc
agaagtcacgcgatgggaaatcacaactctgagagtgagatattgttggatggcgacgat
gacactctatcatccttggaggagaaggaattggagaacctaacaggccctgtaaacatg
agcactagcgctcagctggtcgccccggcggtggtggtgaaaggaacgctgtccatcact
gcatctgaactctacttcgaggtggatgaagatgaggccagctttaagacgatcgatcca
aagcacatccaagccatgcttttctacagcctaattgctttgtaa
DBGET
integrated database retrieval system
