Oncorhynchus nerka (sockeye salmon): 115117330
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Entry
115117330 CDS
T07952
Name
(RefSeq) cadherin-22-like
KO
K06812
cadherin 22
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115117330
Cell adhesion molecules [BR:
one04515
]
Cadherins
Major cadherins
115117330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Cadherin_4
Cadherin_pro
TAS2R
7TM_GPCR_Srw
Stevor
Motif
Other DBs
NCBI-GeneID:
115117330
NCBI-ProteinID:
XP_029501661
LinkDB
All DBs
Position
Unknown
AA seq
648 aa
AA seq
DB search
KGTPGGPEALCYCAVLTCNSPTGTSVMKVTAWDADDPTYGSSARVVYSVLDGESFFTVDR
QTGLIRTAVADLDRETQDRYELVVMATDMAGQMGGLSGSTTVTIVITDVNDNPPRFPQKM
YQFSVSEGAAVGTPVGRVIATDTDMGENTDMSYLIKDEEGGELFKVTTDGDTQEAVITIK
KPLDFESKRTHNVVVEAVNKHVDPRFLELGSFRDQTIVRVSVTDVDEPPVFLPAEGAIME
VQEDARLGALVGTATAKDPDKENAPVRFSIDRSTDQEQIFHIDPVSGAITLGKILDRETA
GWHNITVTAVEADNVSQISHSSVSIRILDVNDNPPELARPYEASICEDVKPGQLIHTISV
VDRDEPQSGQRFSFTLAPEATNNRHFTLWDVKDNTVGIRTQRSGFNRHEQNVYLLPILVV
DTGPPALSSTGTLTIHVCGCDPEGTIQSCNATAYVISASLSPGALIALLVCMLILIVLVL
LILTLKRHRKAQRMSEDEEDMRDNVIKYNDEGGGEQDTQAYDMSALRNLYDFPEAKSGSS
ESGPDLHALPQWIQGRVSGDGGAADFSLFKGYIRKKVEQADADLSVPPYDSFQTYAFEGT
SSPALSLSSIHTLSTTSEQDFSYLSDWGPRFRQLAGYYAPGHPEEEGS
NT seq
1949 nt
NT seq
+upstream
nt +downstream
nt
tgaagggcacgcctggaggtcctgaagccttgtgttattgtgctgttctgacatgcaatt
ctcccacaggaacatcagtgatgaaggtcactgcatgggatgcagatgaccctacgtacg
gaagcagtgccagggtggtgtacagtgtgctggacggagagagcttctttaccgtggaca
gacagactggactgattcggacggctgtggcagatctggaccgggagacgcaggatcgct
atgagctggtcgtcatggcaaccgatatggcaggccaaatgggtggtctttccggctcca
ccacggtgaccatagtgatcacagatgttaatgacaacccaccacgctttccgcagaaga
tgtaccagttttcggtgtctgagggggcggccgtggggacaccggtggggagggtgatcg
ccacagatacggacatgggggagaacacggacatgagctacctgatcaaagacgaggagg
gcggggaactcttcaaggttaccaccgacggagacacacaggaagccgtcatcactatca
aaaagccactggactttgagagcaagcgtacacacaacgtggtggtggaggctgtcaaca
aacacgtggacccccgatttttggagcttggctctttccgcgaccagacaatcgtgcggg
tcagcgtaaccgatgtggacgagccgcctgtcttcctccctgctgagggggcaattatgg
aggtccaggaggatgccaggctaggtgcgctggtgggcacagctacagccaaggacccag
acaaggagaacgcacctgtcaggttctccattgaccgaagtacagaccaggagcagatct
tccacattgatccagtatcgggcgccatcaccctgggcaaaattctggaccgagagacgg
ctggctggcacaacatcactgtgacagcagtggaagcagataatgtatcccagatatccc
attcatcagtgagcattcgtatcctggacgtgaacgataaccctcctgaactggccagac
cttacgaggcgtccatctgtgaggacgttaagccgggtcagctcattcacaccatcagcg
tggtggatagggacgagccgcagtcgggccaacgcttctccttcaccctggctccggagg
ccaccaacaaccgccacttcaccctgtgggatgtcaaagacaacactgtagggatccgga
cccagcgctcgggcttcaaccgccacgagcagaacgtctacctgctgcctatcctggtgg
tggataccgggcctcctgctctgagctccacgggcaccctgaccatccacgtgtgtggct
gcgacccggagggcaccatccagtcctgcaatgccaccgcctacgtcattagcgcctcac
tcagtcccggggccctcatagccctactggtctgcatgctcatactcatagtcctggtgc
tgctaatcctaaccctgaagcgccaccgcaaagcccagcggatgtcagaggacgaggagg
acatgcgcgacaacgtcatcaagtacaacgacgagggaggcggcgagcaggacacgcagg
cctacgacatgagtgccctgcgcaacctctatgacttccccgaggccaagagtggatctt
ctgagtcaggccctgatctgcatgcactgccccagtggatccaggggcgggtgagcggcg
atggcggggcagccgacttctccctcttcaagggctacatccgcaagaaggtggagcagg
cggatgccgacctgtcagtaccgccctacgactcgttccagacgtacgcctttgaaggca
ccagctcgccggccctctccctcagctctatccacaccctgtccactacgtccgagcagg
atttctcctacctcagtgactgggggccacgtttcaggcagctggcgggctactacgccc
cgggacatcctgaggaagagggctcctag
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