Oncorhynchus nerka (sockeye salmon): 115117348
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Entry
115117348 CDS
T07952
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115117348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115117348
Spliceosome [BR:
one03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
115117348
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
Motif
Other DBs
NCBI-GeneID:
115117348
NCBI-ProteinID:
XP_029501682
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Position
LG4:12330615..12340717
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AA seq
293 aa
AA seq
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TRWLKTERSLELEEHVSELQSENTYLGAICFHPQATTPTWGPSVSILRPQHLRGGHLFPS
SGHNTYVGAICFHPQATTPTWGPSVSILRPQPDVGAHLFPSSGHNTYVGAICFHPPATTP
TWGPSVSILGPQHLRGGHLFPSSGHNTYVGAHLFPSSGHSDYVLPMAPSNSGVCTVRSLS
LTSRATPEGSASSLAPLWMLPGHHLAQEEILHQEGHSKGVHDLHFHPDDSGRHWRFTAST
SLPTANDGHFLLTGACDNTAKVWTHQGGPRGQGDGRGHATCSYDRTFKLWMSE
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
actagatggctaaagacagaaaggtcccttgagcttgaggaacacgtgagtgagcttcag
tctgagaacacctacttgggggccatctgtttccatcctcaggccacaacacctacttgg
gggccatctgtttccatcctcaggccacaacacctacgtgggggccatctatttccatcc
tcaggccacaacacctacgtgggggccatctgtttccatcctcaggccacaacacctacg
tgggggccatctgtttccatcctcaggccacaacccgacgtgggggcccatctgtttcca
tcctcaggccacaacacctacgtgggggccatctgtttccatcctccggccacaacacct
acgtgggggccatctgtttccatcctcgggccacaacacctacgtgggggccatctgttt
ccatcctcgggccacaacacctacgtgggggcccatctctttccatcctcaggccactct
gactatgtgctgccaatggcaccgtcaaactctggagtctgtacagtgaggagcctgtcg
ctgacatcgagggccactcctgagggtagcgcgagtagcctggcacccctgtggatgctt
cctgggcaccacctggcccaggaggagatcctgcaccaggagggacacagtaaaggagtc
cacgacctgcacttccacccggacgactctggtaggcactggagatttacagcatcgact
tctctcccaacagccaatgacggtcacttcctcctgaccggggcctgtgacaacacagcc
aaggtgtggacccatcagggcgggccacgagggcaaggtgatgggcgtggacatgccacc
tgctcctacgaccgcaccttcaaactctggatgtcagagtga
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