Oncorhynchus nerka (sockeye salmon): 115117424
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Entry
115117424 CDS
T07952
Name
(RefSeq) SLIT and NTRK-like protein 3
KO
K25834
SLIT and NTRK-like protein 3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115117424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRRCT
LRRNT
Motif
Other DBs
NCBI-GeneID:
115117424
NCBI-ProteinID:
XP_029501756
LinkDB
All DBs
Position
Unknown
AA seq
1152 aa
AA seq
DB search
MLWLSLLSVVVLGCVTPTQTHTHTHTPTPTSTHTPMVDSSEEEVDEPCFEPCTCEVKEGV
LHVHCDGRGFTNASQVSQSWLRPFKLNLQRNSLRRLYSNGFLHHSNAVAINLGNNALQDI
RAGAFHGLGTLRRLYLHENKLEVFRNDTFSGLEALEYLQADYNVIKRIDSGALRYLLKLR
VLILNDNLIPALPPHLFRSVSLTHLDLRGNRLKSLAYAGTLEYVGRSLMELQLEENPWIC
GCEAVQLQTWLGHIPYTAVAGDITCEYPFHLHGKDLREIPRKELCAGEVEGEGEKEGERE
KHGGVQPPQHPPSHPKVNPKPGRPRPTKPSSMVHHQNTHTSSSSTSSSAERRGRERSPRP
TKRPRPSRMPPTQRSLLPNQPPPIAGYQTRPPIPIICPLGCTCNLHISDLGLTVNCKESG
FNNVSQLMPRPLNGRKLYLSGNLIQRIYKSDFWNFSSLDLLHLGNNRISFIQVAFSQRIS
FIQVVISQGISFIQVVFSQRISFIQVVLSQRISFIQVVISQGISFIQVVISQRISFIQVV
ISQRISFIQVVISQGISFIQVVISQGISFIQVVISQRISFIQVVFSQRISFIQVVISQGI
SFIQVVISQGISFIQVVFSQRISFFQVVISQGISFIQVVISQRISFIHGPADPEESLPER
ATNLQRLSPHMFLGLLNLRYLYFEYNEIGVVEAGVFSPMPSLQLLFLNANLLRSLPVGVF
QGISLSRLNLRNNHFLSLPVEGVLEHLTGLVQVDLQQNPWECRCDAAPLKRWLEGLSAVV
VVGEVVCHSPEETTGTDLRSLSLDLLCPNLNTHQATVENQGEWNSSTAPDGDFSLGYPVP
GNGPLGPITKASIPLSVLVLSLLVLFVSAFFAAAALIAYALRRRDKLPFRRQGEVDLAGI
QMECGIFTEQQHHRLPVPKTPPPSALQHSLVYDSILPVVPGPNPNLSPSTHMCSSPVYKN
EDDSVVRQQQQQFSASKEKGNVGRHGSGAGRESEGHYRLVAEREREWNMEVSPPSISTVA
GAVGPPLSDLHGNGTLCPTVIDSQGPTPKVGLVDCLFGISGISAAVPEFRDLPDRYTRPP
PPRYPHPPQPPQPPEPKEETRASQSLVVTTMTACAGPSSSNQSQNSEFPRELRMRLSTKP
DYMEVLDRSYQF
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggctctccctgctgtctgtggtggtcctgggttgtgtgaccccgacccagaca
cacactcacacacacaccccgacgcccacctccacacacacccctatggtggacagctcg
gaggaggaggtggacgaaccgtgcttcgagccgtgcacgtgcgaggtcaaagagggagtg
ttgcacgtgcactgtgatgggcggggcttcactaacgccagccaggtgtcccagtcttgg
ctccgccccttcaagctcaacctgcagaggaactccttgaggcgtctctatagcaatggc
ttcctgcaccatagcaatgccgtggcgataaacctaggcaacaacgcgctgcaggacatc
cgtgccggggcgtttcatggtctggggacactgagacgcctctacctccacgagaacaag
ctggaggtgttccgcaacgacaccttctctggcctggaggcactggagtacctgcaggcc
gactacaatgtcatcaaacgcatcgacagcggggcgctacgctacctgcttaaattacga
gtgctcatcctcaacgacaacctaattcctgctctgcctcctcacctcttcagatctgtg
tctctgacccacctggacctgcgggggaaccgtctgaagagcctggcctacgccgggacc
ctggagtacgtgggccgtagcctgatggagctccagctggaggagaacccctggatctgt
ggctgtgaggcagtccagctgcagacctggctgggacacatcccctacaccgcagtggcg
ggggacatcacctgcgaataccccttccacctgcacgggaaagacctgagggagatacca
cgcaaagaactgtgtgccggagaggtggagggagagggggagaaggagggagagagggag
aagcatggaggggtacagcctcctcagcatccgccctctcacccgaaagtgaaccccaag
cctgggaggcccagaccaaccaagccgtcctccatggttcaccatcagaacacacatacc
tcatcttcttcaacttcatcatcggcggagcggagggggagagagaggtcccctcggccc
accaagcgtccccggccctccaggatgccccccacccagcgtagcctcctccccaaccag
ccccctcccatcgcagggtaccagactcgcccccccatccccatcatatgtcctctgggg
tgcacctgtaacctccacatctcagacctaggattgacagtcaactgtaaggagagcggc
ttcaacaacgtgtcccagctcatgccacgccccctcaacggacggaagctgtacctcagc
ggcaacctcatccagcggatctataagtcagatttctggaatttttccagtctggatcta
cttcacctgggaaacaaccggatctcctttattcaggttgcctttagccagaggatctct
tttattcaggttgtcattagccaggggatctcctttattcaggttgtctttagccagagg
atctcctttattcaggttgtcttaagccagaggatctcctttattcaggttgtcattagc
caggggatctcctttattcaggttgtcattagccagaggatctcctttattcaggttgtc
attagccagaggatctcctttattcaggttgtcattagccaggggatctcctttattcag
gttgtcattagccaggggatctcctttattcaggttgtcattagccagaggatctccttt
attcaggttgtctttagccagaggatctcctttattcaggttgtcattagccaggggatc
tcctttattcaggttgtcattagccaggggatctcctttattcaggttgtctttagccag
aggatctccttttttcaggttgtcattagccaggggatctcctttattcaggttgtcatt
agccagaggatctcctttattcatggtcctgccgaccctgaggagtctctacctgaacgg
gcaacaaacctgcagaggcttagcccacacatgttcctgggtctacttaacctcaggtac
ctgtactttgaatacaatgagatcggtgtggtggaggcgggagtgttcagccccatgccg
tctctccagctgctcttcctcaacgccaacctgctgaggtcacttcctgtcggagtgttc
cagggcatctccctctctcgcctcaatctccgcaacaaccacttcctcagcctgcctgta
gagggggtgttagagcacctcactggactggtgcaggtggacctgcagcagaacccatgg
gagtgcaggtgtgatgcggcccctctgaagcgctggctggagggcctgagtgcggtggtg
gtggtgggggaggtggtctgtcactcaccagaagagaccacaggtacagaccttcgctct
ctttccctggacctcctctgtccaaacctgaacacccaccaggccacggtggagaaccag
ggggagtggaacagctccacagccccagacggtgatttctctctgggctaccccgtgcca
ggcaatggccccctgggtcccatcaccaaggcttccatccctctgtcggtgttggttctc
agcctgctggtgctgttcgtgtcggcgttctttgcggcagcggcgctgatcgcctatgcc
ctgaggaggcgggacaagctgccgttccggcgacagggtgaggttgatctggccgggatc
cagatggaatgtgggatattcaccgagcagcagcaccacaggttaccggtaccaaagacc
cctcctccgtctgccttgcagcatagcctcgtctacgatagcatcctccccgtcgtccct
ggccctaaccctaacctcagtccctcaacacacatgtgcagtagcccagtctataagaat
gaggatgattcagtggtgaggcagcaacagcagcagttctctgcctctaaagagaaaggg
aacgtgggaagacacggctcaggggcggggagagagagcgaaggacactatcgtttggtg
gcagagagagagagagaatggaatatggaggtgtcccccccctccatcagtaccgttgct
ggggcagtgggaccccctctttcagatctccacggaaatgggaccctctgcccaacggtc
atagacagccagggccccacccccaaggtgggattggttgactgcctgtttgggatctct
ggaatttccgccgccgtcccagagttccgagacctgccggacaggtatacacgtccccca
ccaccccgctatccccaccctccacaaccccctcagccccccgaacccaaagaggaaact
agagccagccaatcactcgtggttactacaatgacagcgtgcgcggggccaagcagtagt
aatcagagccagaactcagagtttccgcgagagttgagaatgagactcagtaccaagccg
gattacatggaagtcctggacagatcttatcagttctaa
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