Oncorhynchus nerka (sockeye salmon): 115117487
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Entry
115117487 CDS
T07952
Symbol
snd1
Name
(RefSeq) LOW QUALITY PROTEIN: staphylococcal nuclease domain-containing protein 1
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNase
Motif
Other DBs
NCBI-GeneID:
115117487
NCBI-ProteinID:
XP_029501818
LinkDB
All DBs
Position
Unknown
AA seq
1094 aa
AA seq
DB search
MHGTVCFRYSVFSQLSSLFLLGFNRTVTLDSRLLTCFPLNGVSNFVDMASSVSAQANPAP
VAALQRGIVKMVLSGCAIIVRGQPRGGPPPERQINLSNIRTGALARRAPQSQPDQKDTPD
EPYAFQAREFLRKMLIGKEVCFTVEVKTPLGREYGMVYLGRDTTGENIAESLVNEGLATV
RREGIRGNNPDQARLCDLEDQAKASKKGMWTEGGGTNTVRDLKYIIENPRNFVDSMHQKP
VNAVIEHVRDGSVVRALLLPDYYLVTVMLSGVKCPTFKREADGTESPEPFAAEAKFFTES
RLLQRDVQIILESCPNQVILGTVLHPNGNITELLLKEGFARCVDWSMAVYTQGAEKLRAG
EKSAKERKVRIWKDYVAPTANMDQKDRQFVAKVMQVVNADAVVVKLNSGEYKTIHLSSIR
PPRIEGEEKNKDKDKRFRPIYDIPYMFEAREFMRKKIIGKKVNVTVDYIRAATSSSETST
IPAFAERTCATVTIGGINIAEALVSKGFATVIRYRQDDDQRSSHYDELLAAEARAIKNGK
GLHSKKEVPIHRVADISGETQKAKQFLPFLQESGALSAVVDSVFSGXRSKLYLPKRPALI
TFSRGGWLNTPFSLNHLPSSVPYQPPSSVPYQPPSSVPYQPPSSVPYQSPSSVPYQPPSS
VPYQPPSSVPYQPPSSVPYQPPSSVPYQPPSAVPYQPSSVPYQPPSSVPYQPPSSVPYQP
PSSVPYQPPSSLTTPHCPSAYHTTLPLSSPHHTAPQLTTPHCPSAHHTTLPLSSPHKLAP
APQLNHTQFPHSPHTLPLSRHPHCPQLTTPHCPSPHHTAPHHATPYCSSPRHTILLLTSP
HALSLASRAAPRLTSPPLASPPLASPHRPSPSPHALRLSPHCPSPHCPSPHAPPFASPRC
PSAHHTTLPLTSPHHAAPRLTLCPSPHALPLTSRVAPHLTRCPSPHALPLASRAAPRLTR
CPSPHALPLASRAAPHLTAPHLTTLLLTTLPLTTLPLTAPHCIECPRGSRNMPGGMQVAE
PFSDEAMAFTKELVLQREAALRSPAPQRKGSDLNRSGSNPPPPPPGLQGEPEFKENDKPQ
SQPGRILHKAGRSD
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgcatggtaccgtgtgtttccggtatagcgtgttttcacagttatccagccttttcctc
ttgggtttcaatagaacagtcactttggattcccgtctccttacctgtttccccctaaac
ggcgtatctaactttgtggacatggcatcatcagtttcggcacaggcgaatcctgctccg
gttgcggcgctccagagaggaatagtcaagatggtcttgtcaggatgtgcaataatcgtg
aggggccagccacggggaggcccgcccccggagcgtcagatcaacctgagcaacatccgt
accggagcgctagctcgccgcgccccccagagccagcccgaccaaaaggacacccctgac
gagccctatgccttccaggccagagagttcctgcgcaagatgctgattgggaaggaggta
tgcttcacagtggaggtcaagactcctctgggcagagaatacggcatggtgtacctgggc
agagacaccaccggtgagaacattgctgaatctctggtgaacgagggcctcgccaccgtc
cgcagggaaggaatccggggcaacaatccagatcaggctagactgtgtgacctggaggac
caggccaaggcctccaagaagggcatgtggacggagggcggcggcaccaacaccgtacgc
gacctcaagtacataatcgagaacccccgcaacttcgttgactccatgcaccagaaacct
gtcaatgccgtcattgagcacgtgcgcgacggtagtgtggtccgtgccctgctcctgccc
gactactacctggtcacggtcatgctctctggggtcaagtgtccgacgttcaagcgtgag
gcggacggcacggagtcgccagagcccttcgctgccgaggccaagttcttcacggagtcg
cgtctgctccagagggacgtgcagatcatcctggagagctgccccaaccaggtcatcctg
ggtaccgtcctccacccgaacgggaacatcacagagctgctgctgaaggaagggttcgcc
cgctgtgtggactggtccatggccgtctacacccagggagcagagaaactccgggccgga
gaaaaatctgctaaagaacgtaaagtgcgtatctggaaggactacgtagcccccacagcc
aacatggaccagaaggaccggcagtttgtggccaaggtgatgcaggtcgtcaatgcggac
gccgtcgtggtcaagcttaactctggcgagtacaagaccatccacttgtccagcatccga
ccccccaggatcgagggcgaggagaagaacaaagacaaagacaagcgtttccgtcccatc
tacgacatcccctacatgttcgaggcccgcgagttcatgaggaagaagatcattggcaag
aaggtgaacgtcacggtggactacatcagagctgccaccagctcctcagagaccagcacc
atccccgcctttgcagaacgcacctgtgccacggtcaccatcggcggcattaacatagcc
gaggcgttggtcagtaaaggttttgccacggtcatccgctacagacaggatgatgaccag
cgctcatcccactatgacgagctactggctgcagaggcacgggcaatcaagaacgggaaa
gggctgcatagcaagaaggaggtccccatccacagagtggctgatatctctggggaaaca
cagaaagccaagcagttcctgcctttcctccaggagagcggagcgctcagcgcggtggta
gactctgtgttcagtggcntccgctcaaaactctacctgcccaagagacctgccctcatc
accttctcccgcgggggttggttaaacacccctttctctctgaaccaccttcctagctcc
gtgccataccagcctcctagctccgtgccataccagcctcctagctccgtgccataccag
cctcctagctccgtgccataccagtctcctagctccgtgccataccagcctcctagctcc
gtgccataccagcctcctagctccgtgccataccagcctcctagctccgtgccataccag
cctcctagctccgtgccataccagcctcctagcgccgtgccataccagcctagctccgtg
ccataccagcctcctagctccgtgccataccagcctcctagctccgtgccataccagccc
cctagctccgtgccataccagccccctagctccctcaccacaccacactgcccctcagct
taccacaccacactgcccctcagctcaccacaccacactgcccctcagctcaccacacca
cactgcccctcagctcaccacaccacactgcccctcagctcaccacacaaactggcccct
gcacctcagctcaaccacacacaattccctcactcaccacacacacttcccctcagtcgc
cacccacactgccctcagctcaccacaccacactgcccctcaccacaccacaccgctcct
caccacgccacaccatactgctcctcacctcgccacaccatactgctcctcacctcgcct
cacgcgctgtccctcgcctcacgcgctgcccctcgcctcacctctccacccctcgcctca
ccgcccctcgcctcaccacaccgcccctcaccctcgcctcacgcgctgcgcctctcgccc
cactgcccctcgcctcactgcccctcgcctcacgcgccgcccttcgcctcaccgcgctgc
ccctcagctcaccacaccacgctgcccctcacctcgccacaccacgctgcccctcgcctc
acgctctgcccctcacctcacgcgctgcccctcacctcacgcgttgcccctcacctcacg
cgctgcccctcgcctcacgcgctgcccctcgcctcacgcgctgcccctcgcctcacgcgc
tgcccctcgcctcacgcgctgcccctcgcctcacgcgctgcccctcacctcaccgcccct
cacctcaccacactgctcctcaccacactgcccctcaccacactgcccctcaccgcgcct
cactgtatcgagtgtccgcgcggctccaggaacatgcccggcggcatgcaggtggctgag
cccttcagcgacgaggccatggccttcaccaaggagctggtactacagagagaggctgct
ctccggtccccagcaccccagagaaagggctctgatctcaaccgcagcggcagcaatccc
cccccccctccccctggtctccaaggagagccggagttcaaagagaatgacaagccacag
agccagccaggcagaatccttcacaaggcagggagatctgactag
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integrated database retrieval system
