Oncorhynchus nerka (sockeye salmon): 115117517
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Entry
115117517 CDS
T07952
Name
(RefSeq) transforming growth factor beta activator LRRC32-like
KO
K26316
transforming growth factor beta activator LRRC32
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
115117517
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_LRWD1
LRR_9
Motif
Other DBs
NCBI-GeneID:
115117517
NCBI-ProteinID:
XP_029501850
LinkDB
All DBs
Position
Unknown
AA seq
671 aa
AA seq
DB search
MSRPTTFSLVLLLYCSLSHSLTQFNTVTGRIPDDQQETTSWRFRKLSSVPEGLDVRLREL
DLSNNVIRHINSQSLALPSLLRLDLSYNQLEIISEGAFRDVAQLQELNLARNALSHNVDS
TSRALGSLHRLRRLDLSLNGLDDETAGLYLRDKSILERLDLTGNGLTRLTPKLFAESLSV
RSIRIENNLITAIEEGTFEPLKKLKILNLARNNLVYICDFKLHQVKLLNLSRNSIEFFVT
REDGHPYELEILDLSFNNLLYFPMVPKTNRLRYLHLQSNMVGTLETDTLISQADSLYREL
TSGDEVNDAVDNNNIYSNWKLMPLVYMDLSSNHFRSLPVETLSHLTSLVTLNLSKNCLQD
ISYNTTKGSHVGGHHQPSLTFPSLRYFDLQNNGLRQLSTFFLEALPNIETLNLKENSVRP
CDPKDQLGPSETTRVSLNRMSPCVSFWNIKTLTSLDLQDNGIKTLHQNTFEGTPLVSLNL
ASNVDILFDIGALEGLQSSLQSLSISGNSMTTSALSLPCLKALRRLNMSNNNVDVLPGII
SCSPLTELDLRNNGLTSMNESVVDRLSLYLDVLYVSGNSFNCCDTNWLKALNKEKVNIPD
LDHAVCLSVNGTLLTGLLPNHSLHCSLELSPKITEPNLGQIIIILLFVSTVLITLVVFVK
KVCCNTGSLIV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgagcagacctacaacattcagcttagtgctactgctgtactgctctctgtctcacagt
ctcacacagttcaacaccgtgactggaaggatacctgatgaccaacaggagacgacttcc
tggaggttcaggaagctatcatctgttcctgaggggctggacgtgaggctgagggagctg
gatctgtccaacaacgttataagacatataaacagccagagtctggctcttccatcccta
ctgagactggacctcagctacaaccagctagagatcatatctgaaggggctttcagagat
gtggcccagcttcaagagctgaacttggccaggaatgcattgagccacaatgtggacagt
accagccgagctcttgggtctctccacagactgaggaggttggatctctctctgaacggt
ctggatgatgagacggcgggcctttaccttcgtgacaaatcaattctagaacgcctagat
ctcacgggcaacggtttgacgcgactcacacccaagctgtttgcagagagcctgagcgtg
agaagcattcgcatcgagaacaatctgatcacggcaatagaggagggaacgtttgaaccg
ttgaagaaactcaagatcttaaatttagccagaaataatctagtctacatctgtgatttt
aaactccatcaggtgaaactcttgaatcttagcaggaattccatagagttctttgtcacc
cgtgaagacggtcacccctacgagctggagatcttagatctgagcttcaacaacctcctc
tatttccccatggtccccaagaccaaccggttgagatacctccacctacagagcaacatg
gtagggaccttagagacagacaccttaatatcacaggcagactcgctgtacagagaacta
acaagtggagatgaggtaaatgatgctgtagacaacaacaacatatactctaactggaaa
ctgatgccgttagtttacatggacctcagtagtaaccacttcaggtctctacctgtggag
actctgagccatctgacgtctttggtgacgctgaacctcagcaagaactgtctacaggac
atcagctataacacaacgaagggcagccatgttggaggccaccaccaaccttccttgacc
tttccgtctctacgctacttcgacctgcagaacaacggtcttcgacaactctccaccttc
ttcctggaagccctaccaaacatagagacattaaacctgaaggagaactctgtgaggcct
tgcgatccaaaggaccaactgggaccatctgagacaacgagagttagtcttaataggatg
tccccttgtgtttccttctggaatatcaaaactctgacaagtctagatctccaagacaac
gggatcaaaacactccatcagaacacatttgaaggaacccctttggtttctctcaacctg
gccagtaatgtagatatactctttgatattggcgctctagaagggttgcagagtagtctc
cagtctctgagtatcagtgggaacagcatgacaacctctgccttgtctctgccttgtctg
aaagcattgagacgactcaacatgtccaacaacaacgtagacgtcctcccaggcatcatc
agctgttctcctttgacggagcttgacctgagaaataacgggctaacgtctatgaatgaa
tctgtggttgatcgtttgtctctatatcttgatgtgttgtatgtcagtggcaactctttc
aactgctgtgacaccaactggctcaaagccctaaacaaagagaaagtgaatattccggac
cttgaccatgctgtgtgcctcagtgtcaatggtactctgttgactggccttctgcctaac
cattcactgcactgttcattggaacttagcccaaagataacagaaccaaaccttgggcaa
ataataataatacttttgtttgtgtcgacagtattgataacattagttgtatttgtgaag
aaggtttgttgcaacacggggtcattaattgtgtaa
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