Oncorhynchus nerka (sockeye salmon): 115117605 Help Entry 115117605         CDS       T07952                                  Symbol rttn Name (RefSeq) rotatin   KO K16484   rotatin Organism one  Oncorhynchus nerka (sockeye salmon) Brite KEGG Orthology (KO) [BR:one00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:one03037]     115117605 (rttn) Cilium and associated proteins [BR:one03037]  Primary cilia and associated proteins   Other primary cilia associated proteins    115117605 (rttn) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RTTN_N ARM_LIN_2nd Motif Other DBs NCBI-GeneID:  115117605 NCBI-ProteinID:  XP_029501956 LinkDB All DBs Position Unknown AA seq 1598 aa AA seqDB search MELSPLIKKIGHSLAEIRVRALKSIICKLDHSLLSVSDLVQEKMLFVYLLEWFNFPEVPM QEEVLQLISTLSKHPTAAQMLRDVGAVEFLTQLSPNVEPPLRAIIDGIFDLLFQLPELLP ACPTIYSNIHQLQNTTTAVPLEEDSPAVGYFQTKRPSHIDVPPQRIAVNNSVGCLKFSTF PWLALTTTDQHILSSNESSLRSNNHNLVRTTCELLRDVIMQDFPAEIFLQRPSIVQNLLS ILRLTPGESEAGYLRLQAVACLQQLCVGLRRRLRFHRDPSFYSAKEDPVSQNSSLSYSQE VHGGGAQRSLASSPGGECFPRPSVVGRNGQRPRGDGQDGDAASNSLPLSSSSSQRGGAAA QASRQTAPSPADAAQLELPDLGVEDVLVLQLQQLSLAQFTVATMEHAIPLLRTDGVRVFR GVCELLCEAVVLLRDSVCDLVWDDTSLVGMELRAKLKITMETLGDIMTYHESCSSDCPES SLVQHRLAYVATAVFTIRLLQTILPLEKASGHLPESAVAVLLSLCLDRPFSLAYPSMAEA AVAYLEQVNPEGHDLYRRTSRAALWMESTCMFLKETQQQGDKNWLELLELADQAIDGLPY HQHLPIVKECIHICSYLWKFEQASPLLQTESQRVLLKLLTHPLLPVKTETYTCTLNVVKE CLGVQNVVKPVSSVCSGVNFLLHPKVLYQISAFGLQDPIGKVNSAAKDILLFLLKCPLMM TASTWERFNQALYPVIPILQSYAGTEDALGNCVLLISEVSNEVRDGVFPNTAKLRAALRL LFTKEPEVRAAAVQHLLPHLTSVEGATTVRPTLAGPVLSSLPSLFCLNNALDINLDSSDR SFLKVESVEKLFHIFTSDTVDLTLRRSAAEQLAVVLQETAMHPVLKSLGVTDKVICFITE SVNDHRKSMDCLLEPCVCILRKLVYADPSLRHLLAEKTPLLITLLRASLLVKENKGDVSE AAVLMCLLLFDEIATVEVWLDNSSSDVALSPFSLPVSVIRRYSLPFQAASHHAVSPYCSV LPPYSDLLSLTPAKETLQLAWNTAWHSGIDNLLEELRGIRSDVADFHGDLSLSGSQVLSL RATHLPSSLQDCVQDIIMAAGHASVTSALSRLRLHLLIDRMAITGTHTHSCRDTLRSLTW QPAIARFVQVRPACVEDERLLVDVIAFLNAYFKQSHLGSEDKDLRWILELLLKQETNSLL DLLLGEDSQTHTPTHAASQGETEELVELRAQINQRLQRELTGFINTLLHRLTHTTDRFCL ALTGPFESHLAVRFLQCLRVSDAPRFYGLPSLERNLLGMVSLTAQPGWSSHCPNMEPQSL CTKYLSGLLEVISSFYVEWGGNSMSFMGKGVTKNAVICLLHLSHEMMAQNKDKDFISQWS LGQEVGSDDPSGSQLGLAWLIPLWVDRDPEVRFASLGVGSALSSVPSGCQSLSSSCQNIS GGLWGTLLNILLDQQESTMVRREAVFILQNLLVMPMPATADQVTDSTWQSPCVHDESSGV CLVGLQALQALLYHCQFFQHTALMATACYRGRYTFDLQPSARDPGPQDSTTEDADDSLRL WRPPNRVPVNPSRASGSLSTSSTLVRKVLQVWWIKAHS NT seq 4797 nt NT seq  +upstreamnt  +downstreamnt atggagttatcaccgcttataaagaagattggtcactccttggcagagatcagagtccga gcattgaagagcatcatctgtaagctagaccactctctcctctctgtctctgacctggtc caggagaagatgctgtttgtttacctgctggagtggtttaacttccccgaggtgccaatg caagaggaggtcctgcagctgatcagtactctgtccaagcaccctactgcagcccagatg ctgagagatgtcggggcagtggagtttctcacccaactctcccccaacgtagagccaccg ttacgggccatcatcgacggcatcttcgatctgctgtttcaacttccggagctgcttcct gcttgtccaaccatctattctaatatacaccagctacagaacaccactactgcagttccc ctagaagaggactctccagcggtgggctatttccagacaaagaggccgagtcatattgat gttccaccacagaggatagcagtgaataactccgttggatgtctgaagttttctacattt ccctggttggctttgaccacaacagaccaacacatattgtcatccaatgagagttctcta aggagtaacaaccacaacttggtgaggaccacgtgtgagctcctacgtgatgtcatcatg caggacttcccggctgagatatttctccagcgtcccagtatcgtgcagaacctcctgtcc atcctgaggctgactccaggtgagagtgaggcaggctacctgagactgcaggcagtggcc tgtctacagcagctgtgtgtggggctgaggaggagacttcgtttccacagagaccccagc ttctactccgcaaaggaagacccagtgtcccagaactcgtcactgtcttactcccaggag gtgcacggggggggggcccagcgctccctggcctcgtccccaggaggagagtgctttcct cggccctctgtggtggggcgtaacggccaaagacccagaggggacggccaagatggggat gctgcctccaacagcttgcctctcagcagcagtagctctcagagaggtggagctgcagct caggcctccaggcagaccgccccctcgcctgcagacgcagcccaactagagctgcctgat ctgggggtggaggacgtcctcgtgctgcagctccagcagctcagcctggcccagtttact gtggccaccatggagcatgccataccactgctcaggacagacggcgtgcgtgtgttccgg ggtgtgtgtgagctgctgtgtgaggcggtggtcctgctgagagacagtgtgtgtgatctg gtctgggacgacaccagcctggtggggatggagctgagggcgaagctgaagattaccatg gagacactgggtgacatcatgacctatcatgagagctgttcctcagactgtcctgagagt tcattggtccagcacagactggcctacgtagccacagccgtcttcaccatcagactgctg cagaccatactgcccctggagaaggccagtggtcatctcccggagagtgctgtggcagtc ctcttgtctctgtgtctggaccggcccttcagcttggcctatcccagcatggcggaggct gcggtggcctacctggagcaggtgaaccctgaaggccatgacctctacaggaggaccagc cgtgctgctctctggatggagtccacctgcatgtttcttaaggagacgcagcaacaggga gataagaactggcttgaattactggagctggcagaccaggccatagatggccttccatac caccaacacctacctattgtcaaggagtgcatccacatctgctcctacttgtggaagttt gagcaggccagtccactgctccagacagagagccagagggttctactgaagcttctgacc catcccctcctccctgtgaagactgagacctacacctgcaccctcaatgtagtcaaggag tgtctgggggttcagaatgtggtcaagcccgtgtcgtcagtctgtagtggggttaatttc ctccttcaccccaaagtcctctaccagatcagcgcatttggactccaggacccaattggg aaggtaaactctgctgccaaggatattctgctcttcctgctgaagtgcccattaatgatg acagcatcaacatgggagaggttcaaccaggcactttacccagtcatccccatattacag agttacgcaggcacagaggatgcactgggaaactgtgttcttctgataagtgaagtgtcg aacgaggtgagagacggagtgtttccaaacacagccaagttgagagctgcactacgacta ctcttcactaaggagccagaggtccgagctgcagcagtccaacaccttcttccccacctg accagtgtagagggggctactacagtcagaccaaccctggcgggtcctgtcctctcctct ctcccctccctcttctgtctcaacaatgcactggacatcaacctggacagcagcgaccga tccttccttaaggtggagtcagtggagaagctgttccacatctttacctctgacactgtt gacctgaccctcaggaggtcagcagcagaacaactggctgtcgtcctacaggaaacagca atgcacccagtgttgaagagtcttggtgtaacagataaagtgatctgcttcatcacagag agtgtgaacgaccacaggaagagcatggactgcctgttggagccgtgtgtgtgtattctg agaaagctggtgtatgcagacccctccctgaggcatcttctggctgagaagacccccctc ctcatcactctgctcagggcttcattgcttgtcaaggagaataaaggggatgttagtgag gcggctgtgttgatgtgtctgctgctctttgatgagattgccacagtagaagtgtggttg gacaattccagctccgacgtggctctctcaccgttctctctccctgtgtctgtcatacga aggtacagcctaccgttccaggccgcgtcccaccatgcggtgagcccctactgctccgtc ctgcccccctactctgacctcctctccctgacccccgccaaggagaccctgcagctggcc tggaacaccgcatggcattctgggatagataacctcttggaggagctccgtgggatccgc agtgatgtcgccgatttccacggtgatctgagcctttcagggtcgcaggttctgtcatta cgggcaacacacctccccagcagccttcaggactgcgtccaggacatcatcatggcagca ggccatgcctctgtgacctctgcactctccaggctccgcctccacctgctgattgacagg atggccatcacaggcactcacacacacagctgcagggacactctccgttccctcacctgg cagcccgccatagcaaggtttgtgcaggtgcgtccagcgtgtgtggaggatgagaggttg ctggtggacgttatagcgttcctgaacgcctacttcaaacagagccatttagggtccgag gacaaggacctccgctggatactggagctactcctcaaacaggagaccaactcactgctg gacctgctgctcggcgaggactcgcagacacacacgccgacacacgcggcgagtcaggga gagacggaggaactagtagaactgagggcccagatcaaccagagactacagagagaactg acagggttcatcaacacattactgcaccgcctcacacacaccaccgacaggttttgtttg gcactgacagggccctttgagagccatctggcagtgcggtttctccagtgcctgcgggtg tcagacgccccacgcttctacggcctcccgagtctggagaggaatctgctgggcatggtc agcctcacggcccaacccggctggagctcacactgtcccaacatggagccccagtctctc tgcaccaagtacctcagtggactactggaggtgatctcgtcattctacgtggagtggggg ggtaactccatgtccttcatgggaaaaggagtcaccaagaatgctgtcatctgtctgctt cacttgtcccatgagatgatggcccagaacaaagacaaggacttcatttctcagtggtct ttgggtcaggaggtggggtctgatgaccccagtgggtcacagctgggtcttgcctggctc atacctctgtgggtggacagagacccggaggtgaggtttgccagcctgggtgtgggctct gccctgtcctctgtgcccagtggatgccagtctctgagtagcagctgtcagaatatcagt ggaggtctgtggggaaccctgctcaacatcctcctggaccagcaagagagcaccatggtc cgcagagaggcggtgtttatcctccagaacctactggtgatgcccatgcctgccacagct gaccaggtcaccgactctacctggcagagtccgtgtgtccatgatgagtcttcaggtgta tgtctggtgggtctccaagccctacaggctctgctctaccactgtcagttcttccagcac actgccctcatggccacagcctgctacagaggcaggtacaccttcgacctgcaaccctca gccagggaccccggcccacaggacagcaccactgaagatgcggatgactccctgaggttg tggagacctcctaaccgagtcccagtgaatcctagcagggcctctggctccctgtccacc tccagcactctggtacgtaaagtattgcaggtctggtggatcaaggcccattcatag

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