Oncorhynchus nerka (sockeye salmon): 115117660
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Entry
115117660 CDS
T07952
Name
(RefSeq) ras-specific guanine nucleotide-releasing factor 2-like
KO
K12326
Ras-specific guanine nucleotide-releasing factor 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115117660
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RhoGEF
RasGEF_N
PH
SOS1_NGEF_PH
IQ
DUF641
Motif
Other DBs
NCBI-GeneID:
115117660
NCBI-ProteinID:
XP_029502012
LinkDB
All DBs
Position
LG4:29171901..29206760
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AA seq
1278 aa
AA seq
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MQKSVRYNEGHALYLSLVARKEGTKRGILSKKTTENSRWNDKYFALYQNVLFYFENDQST
RPSGIYLLEGCTCERVPAPKGATVSKDMVDKQQSAPCRLGLNSPFHTYHSTCSYSDIIIE
REVLMQKYIHLVQIMETEKVAANQLRTQLEDQDTEIERLKAEIVLLNKAKERMLPYQTNQ
EEEDPDIKKIKKVQSFMRGWLCRRKWKIIVQDYICSPHAENMRKRNHIVFNMVEAETEYV
CQLSVLVNFFLRPLRMAASSKKPPISHDDVSSIFLNSETIMFLHEIFHQGLKARIANWPT
LVLADLFDILLPMLNIYQEFVRNHQYSLQVLANCKQNRDLDKLLKQYEANAACEGRMLET
FLTYPMFQIPRYIITLHELLAHTPHEHVERKSLEFAKSKLEELSKMMHDEVSDTENIRKN
LAIERMIVEGCDILLDTSQTFVRQGSLIRLPSSSERGMLSKVRLGSLSLRKEGERQCFLF
TKHFLVCTRTSGGKLHLLKQGGVLSLIECTLVEELDANDEDYNAGGQGFNHLEFKIVVEP
PDGPAFSVVLLAPSRQEKAAWTSDISQCIDNIRCNGLMTSVFEENSKVTVPHMIKSDARL
HKDDVDICFSKTLNSCKVPQIRYASVERLLERLTDLRFLSIDFLNTFLHTYRIFTTAAVV
MDKLADIYKKPFTSIPVRSLELFFATNQGTWGGEHLNNKSPRLCRKFSSPPPLTIPSRTS
SPVHSRKLSLSSPVSSKAGVLDLSTPSSSAANSPTSSHPPSISSPPPNATRPPSGFSSPP
PNATRAPSGFSSPPPTCTRAPSLPTVLGVSTSPPTTTKALLELSRPTCSQEPVPPTPEEG
GDMPRIDAFCGKLRRSIRRAVLETVSLEKFLPESNPQVSEDRVPLTESPCRSPSTPRHMR
YRQSGGSTGENNRGTMSPASAFAIATAAAGHGSSQGFNNSERTCDKEFIIRRAATNRVLN
VLRHWVSKHSQDFEMNSELKVGVMTLLEEVLRDADLLPQERKATGNILSALSQDEQDDAQ
LKIEDILQTAECPKAECFESLSAMELAEQITLLDHIVFRSIPYEEFLGQGWMKLDKSERT
PYIMKTSQHFNDMSNLVASQIIAHTDVGSRANSIEKWLAVADICRCLNNYNGVLEITSAL
NRSAIYRLKKTWAKVCKQTKSLMDRLQKTVSSEGRFKNLRETLKNCNPPCVPYLGMYLTD
LAFIEEGTPNFTEEGLVNFSKMRMISHIIREIRQFQGAPYRIEHQAKVTQFLLDRTLVMD
EDTLYELSLKIEPRIPPG
NT seq
3837 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagagcgtgcgctataatgaggggcacgctctatatctgtcgcttgtcgcgcgc
aaagagggcacgaaacgcggcatcctgagcaagaagacgacggagaacagtcggtggaat
gacaagtactttgctctctaccagaatgtgctcttttacttcgaaaacgaccagagcact
cggccctccgggatttacttgctggaggggtgcacgtgcgagagggttcccgcgcccaaa
ggcgccacggtcagtaaggacatggtggacaagcagcagagtgcaccatgtcggctgggt
ttaaactcaccattccacacttaccattccacctgtagttactctgacatcatcattgag
cgcgaggtcctgatgcagaagtacatccacctggtccagatcatggagacagagaaggtg
gcggccaaccagctacgcacccagctagaggaccaggacacagagatagagaggctgaaa
gcagagatcgtgctgttgaacaaggccaaggagagaatgctgccttaccagaccaaccag
gaggaggaggacccagacattaaaaagatcaaaaaggtccagagtttcatgcgaggctgg
ctgtgtcggaggaagtggaagatcatcgtccaggactacatctgttccccccacgctgag
aacatgaggaagaggaaccacatcgtgttcaacatggtggaggccgagaccgagtacgtc
tgccagctctctgtcctggtcaacttcttcctcaggccgctacgtatggccgccagctcc
aagaaacctcccatcagccacgatgatgtcagcagcatcttcctcaacagtgagaccatc
atgttcctccatgagatctttcatcagggcctgaaggctcggatagccaactggcccacg
ctggtgctggcggacctgtttgacatcctgctgcccatgctgaacatctaccaggagttt
gtgaggaaccaccagtatagcctgcaggtgctggccaactgtaaacagaaccgggacttg
gacaagctgctgaagcagtatgaggcgaacgctgcctgtgagggacgcatgctggagacc
ttcctcacgtaccccatgttccagatccctcgttacatcatcactctccatgagctgctg
gcacacacgcctcatgagcacgtggagcgcaagagcctggagttcgccaagtccaaacta
gaggagctgtcaaagatgatgcatgatgaggtgagcgatacagagaacattcgtaagaat
ctggccatcgagagaatgatcgtagaaggctgtgacatattgctggataccagccagacc
tttgtcagacagggctctctgatcaggctcccatccagcagtgaacggggcatgctcagt
aaggtccgtctgggctctctgtccctcaggaaggaaggagaacgacagtgcttcctattt
acgaaacacttccttgtctgcacacgcacctccgggggaaagctgcacctgctcaagcag
ggtggggtgttgtctctaatagaatgtacccttgtagaggagctagatgccaacgatgag
gactacaatgcaggaggtcagggcttcaaccacctggagtttaaaatcgtggtggaaccc
cctgatggccccgccttctctgtcgtcctattggctccctcccgccaggagaaagctgcc
tggaccagtgacatcagtcagtgtatagataatatccgctgtaatggcctgatgaccagc
gtatttgaggagaactctaaagtaactgtgccgcacatgatcaagtcggacgcacggctg
cacaaagatgatgtggacatctgcttcagcaagacgctcaactcctgcaaggtcccccag
atccgctacgccagcgtggagcggctgctggagagactgactgacctgcgcttcctctct
atcgacttcctcaacaccttcctccacacgtacaggatctttactaccgctgctgtggtc
atggacaaactggccgacatatacaagaaaccttttacctctataccggtcaggtctctg
gagttgttctttgccaccaaccaggggacgtggggaggcgagcacctcaacaacaaatct
ccccgtctctgtcgcaagttctcctctcctcctcctctcaccatcccctcccgcacctcc
tccccggttcactcccgcaaactctccctctcctccccggtctcctccaaggcaggggtc
ctagacctctccaccccttcctcctctgctgctaactcccccacttcctctcaccctccc
tccatctcctccccccctcccaacgccaccaggcccccttcagggttttcctcccctcct
cccaatgccacccgggctccatctgggttctcgtcccccccgcccacctgtacgcgggct
cccagcctgccaacagtcctgggggtctccacctcccctcccaccaccacaaaagccctt
ctagaactgagccgccccacctgttcacaggaacctgtccccccaacgccggaagaggga
ggagacatgccgcgcatcgacgcattctgtggaaaactcagacgcagcatccgcagggct
gttctggagacggtttctctggagaagttcctcccagagtctaaccctcaagtcagcgag
gaccgagtccccctgacagagtccccctgtcgctccccctctacacccagacacatgcga
tacagacagtctggaggttccacgggggaaaacaatcgtggtactatgtcaccagcctca
gccttcgctattgccacggcagccgccggacacggcagttcccagggtttcaataatagc
gagaggacctgtgacaaggagtttatcatccgtagagctgctaccaacagagtcctcaac
gtactgcgtcactgggtctccaagcactcacaggactttgagatgaacagtgagctgaag
gtgggtgtaatgacccttctggaggaggtgctaagagacgcagacctgctgcctcaagag
aggaaagccaccggaaacattctaagtgccctttctcaagatgaacaagatgatgctcaa
ctcaagatagaagacatcctacagacggcggagtgtcccaaagcagagtgttttgagtct
ctgtctgcaatggagctggctgaacagatcaccctgctagaccacattgtgttcaggagc
atcccttacgaagagtttctgggccagggctggatgaagctggacaagtcagagagaact
ccatacatcatgaagaccagtcagcactttaacgatatgagtaacctggtagcgtctcag
atcatcgcccatacagacgtgggctccagggctaactccatagagaagtggttggcggtt
gctgatatctgtcgctgcctcaacaactataacggcgttctagagatcacctcagctctc
aaccgcagcgccatctacaggctgaagaagacatgggccaaagtctgcaaacagaccaag
tcgttgatggacaggctgcaaaagacagtgtcatcagagggccggttcaagaacctgaga
gaaaccctgaaaaactgcaaccctccctgtgtgccctatctggggatgtacctgactgac
ctggccttcatcgaagagggaacgcccaacttcaccgaggagggactcgtcaacttctcc
aagatgaggatgatttctcacatcatcagagagatccgtcagttccagggtgcgccctac
aggatagagcaccaagccaaggtcactcagttcctgctggataggactctggtgatggat
gaggacacgttgtatgagctgtccctgaagattgaaccccgcatccctcctggctaa
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