Oncorhynchus nerka (sockeye salmon): 115117745
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Entry
115117745 CDS
T07952
Name
(RefSeq) long-chain fatty acid transport protein 6-like
KO
K08749
solute carrier family 27 (fatty acid transporter), member 6
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03320
PPAR signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
115117745
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
one02000
]
115117745
Transporters [BR:
one02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
115117745
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
115117745
NCBI-ProteinID:
XP_029502109
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Position
LG4:1120172..1159749
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AA seq
623 aa
AA seq
DB search
MFFSLGSVTALVAGIFALHVVQKLCFPYFWKDVFYLVKVIRYGARLEIFKITSKVVTIID
RFVQQAERIPTKPFLIYEGITYTYQDINERSNKLANVFLEQGTLKKGDSVALLMNNEPDF
ICVWFGLIKLGCAVAFLNTNIKSRSLLHCFNCCGAKTLVVGADLLDSLEDILPSFLEDNI
SVWAMKNESSHTEVQTLLDKMDKASDKPTPPALRAATSLKAATLYIFTSGTTGLPKAAVI
THLQSLKAAAGFWAYGGSEDDVVYIPLPLYHSAASLIGIGGTIEMGATCVLKKKFSASQF
WNDCRKYDVTIFQYIGELCRYLCNQPKAEGEKKHKVHMGVGNGLRQDVWREFHRRFGEIR
MCELYGSTEGNLCFMNHIGKIGAVGRSNFFYKLLFKYDLVRYDMVRDEPVRNSQGFCQHV
NKGETGLLLSKIGASSPFFGYAGSKQLTEKKLMRNVFVKGDAYFNTGDLMAEDAEDFICF
KDRVGDPFRWKGENVATTEVTEVLGLVDFIQEANVYGVEIPGNEGRAGMAAIIVRPECEF
SGKKLFDHVLNDLPGYARPLFIRLQESMEMTGTFKQQKFNLVESGFNPSTICGPLYFLDF
SEKSYVPLTNTLYSSILAGERKL
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgtttttctcgttgggatcggtgacagctctagtggctggcattttcgccctacacgtt
gtacagaaactgtgtttcccttacttttggaaggatgttttttatttagtgaaagtcatc
cggtacggcgcacgtctggagatattcaaaattacttcaaaagttgtcactatcattgac
agattcgtgcaacaggcagagcgaattcccacaaaacctttccttatatatgagggaata
acgtacacctatcaagacattaacgagcggagcaacaaattggcgaatgtcttcctcgag
cagggcacgttgaagaaaggggactccgttgcgcttctgatgaacaatgagcccgacttc
atctgtgtttggttcggattgatcaaactcggatgtgcagtggcctttctaaacacaaac
attaagtccagatcgttgctacattgtttcaactgctgtggggccaagactcttgttgtt
ggtgcagacctgttggactccttggaggacatcttgcccagcttcctggaggacaacatc
tcggtgtgggccatgaagaacgagagcagccacacggaggtccagacactgctagataag
atggacaaggcgtcggacaagcccaccccgcctgccctgagggctgccacctccctcaag
gccgccaccctctacatcttcacctcaggaaccactggtctgcctaaggctgcggtcatc
acacacctccagtccctgaaggctgcagcagggttctgggcctacggtgggtcggaagat
gatgtggtctacatccccctgcctctctaccacagtgcagcctctctcatcggcatcggg
ggaaccatcgagatgggcgctacctgtgtcttgaagaagaagttctcagcctcacagttc
tggaatgactgtagaaaatacgacgtgaccatcttccagtatatcggcgagctctgtcga
tatctgtgcaaccagcctaaggccgagggggagaagaagcacaaggtgcacatgggtgtg
ggaaacgggctccggcaggacgtgtggcgggagttccaccgacgtttcggcgagatccgc
atgtgcgagctctacggctccacagagggcaacctgtgtttcatgaaccacatcggcaag
atcggagctgtgggccgctccaacttcttctacaagctcctcttcaagtatgacctggta
aggtatgacatggtacgagatgagccggtcaggaacagccagggcttctgtcaacacgtt
aacaagggtgagacgggtcttctcttgtccaagattggcgcctccagtcccttctttggc
tacgcggggagcaaacagctgaccgagaagaagttgatgaggaacgtgttcgtgaaggga
gacgcgtacttcaacactggagacctcatggctgaagatgctgaggactttatctgtttc
aaggaccgagtgggggaccctttcaggtggaagggtgaaaacgtggcaacaacagaagtg
acggaggtgctcggactggtagactttatccaagaggccaatgtctatggggtggagatt
ccaggaaatgagggaagagccggaatggccgccatcatcgtgaggcctgaatgtgagttt
agcgggaagaagctatttgaccacgtcctcaatgatctaccaggctatgctcgtcctctc
ttcataaggcttcaggaatcaatggagatgacgggaaccttcaagcagcagaaattcaat
ctagtggagagcggattcaacccttcaacaatctgcggccctctctatttcctggatttc
tccgagaaaagctacgttcccctcacgaacacgctgtacagcagcattttggctggcgag
cggaagctatag
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