Oncorhynchus nerka (sockeye salmon): 115117902
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Entry
115117902 CDS
T07952
Name
(RefSeq) laminin subunit beta-2-like
KO
K06243
laminin, beta 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04510
Focal adhesion
one04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115117902
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115117902
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
Alanine_zipper
EzrA
Motif
Other DBs
NCBI-GeneID:
115117902
NCBI-ProteinID:
XP_029502269
LinkDB
All DBs
Position
Unknown
AA seq
1402 aa
AA seq
DB search
MFVVFILQACDCDPDGSLNGGICDGHDEPSLGMVAGQCRCKDHVEGPRCDKCKSGFFGLS
ADHPLGCQACQCDPRGTVSERPPCDPVSGDCFCKRQVTGRSCGQCLPEHWALSHDPNGCR
DCDCDVGGATDNHCSMDNGQCRCRSHMMGRQCTQVESGYFFMALDHYTYEAELAMLGQGC
SVEQREHQPERPATWTGTGFAKVPEGSSLEFSINNIPYSMEYDLLMRYESQMPQDWEEVR
VTIVRPGPIPTSSPCGNTIPADDMLTVSLPAGSRFVVLPQSICLEREISYKLHFEFSRYL
NGNNVLIPGTTAANILVDSISLLPRYSSLEMFIGGDPASIARKQSYERYRCHDGAKSVAR
PQISDVCAKHITSMSAIINHGALACQCDPQGSVSSVCEMRGGQCRCRSNVIGRRCDRCAP
GTYGFGPAGCRACECSLEGAVTRFCDQLTGQCPCSQGAFGQRCDGCQAGHWGFPNCKQCL
CNGHAEECHQRTGACLNCRENTGGDKCDRCANGYYGNPVLGTGNGNRCQPCPCPDGPNSG
RHFATSCHQDNRNRQVVCNCNQGYTGSRCEECAPGYYGNPSQPGGRCQPCRCSNNIDMSD
LDACDRRTGECKKCLYNTEGPDCGVCNSGYYGDASRRNCRKCTCNFLGTAQTQCTARDEC
VCQRATGQCLCLPNTIGLTCDHCEPNYWNLASGRGCEACGCEPNNAVNPACNEFTGKCQC
RDGFGGKICTDCQENYWGDPRIQCRACDCDPRGIETSQCGQKTGHCVCQQGVSGVRCDQC
ARGFSGQFPNCQPCHQCFGDWDRVVQNLAVRTKTLSERAVEIQNTGLTGAYEKAFKDLEE
KLARAQGIVNARNTTTEAVSSLMELIEDLRSQIGETTDVLNHLEGDLTSVGNSNVEASNE
LSALEREAKELNLTSDQLHRQLDILKNSNFLGAYESIRSSYNKSRDAERRANQYTTTTPS
TVSQSADTRRKTERLISAKKDDFNRKNAANKRALGDLNAKAQTLDMKKINEKVCGGPGDS
PCVESHCGGAGCRDDEGNRHCGGLNCNGAVAMAENALEKSKHAEKELNIAMREVEELFHK
VADAKTKAEEAKGKAQAALDKATNTKNKVERSNNDLRDLIKQIRDFLMQEGADPDSIETV
ANRVLELSIPASPQQIRHLAEEIKDRVRSLSNVDAILKQTQDDVRKAEQLLQEAKKARNR
ADGVKSTAETVKRALEDAKTAQAAAEKAIQRAKVDIGETEVRLAQIESETSSSEHDLNNA
MDRLGNLERGIDGLKLKRAKNSMAAARAEETATMARDKANDAKQILDGELTDKYHTVQDL
VDRKAKTVQEAKKTAERLRDEAKELLKDAQDKLQRLAELEKDYEENQKKLEGKARQLDGL
EDKMKAILNDINKQIQIYNTCQ
NT seq
4209 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttgtcttcatcctgcaagcctgtgactgtgatcctgatggttccctgaacggg
ggcatctgtgacgggcatgatgagccgtccctgggcatggtcgctgggcagtgccgctgc
aaggaccatgtggagggacctcgctgtgacaaatgcaagtctggcttcttcggcctgagt
gcagaccatcctcttggctgccaagcctgccagtgtgaccccaggggtacggtgtcagag
agaccaccgtgtgaccctgtgagcggggactgtttctgcaagcgccaggtcaccggacgc
agctgtggccagtgtctgccagaacactgggcactgagtcacgacccgaatggctgcaga
gactgtgactgtgatgtgggcggagccaccgataaccactgctcaatggacaatgggcag
tgtcgttgtcgtagtcatatgatgggccgtcaatgtacccaggtggagtctgggtacttc
ttcatggctctggaccactatacctacgaggctgagctggccatgctgggacagggctgc
agtgtggagcagagggagcatcagcctgagcgccctgccacctggactggcactgggttt
gccaaggtcccagagggcagcagcctggagttctccatcaacaacataccctactccatg
gagtacgacctcctcatgcgctatgagtcgcaaatgccacaggactgggaggaggtccgt
gtgactatcgttcggccagggcccattcccaccagcagcccatgtggaaacaccatccct
gcagacgacatgctcactgtttccctgcctgcaggatccaggtttgtcgtgctgcctcaa
tctatctgcttggagagagaaattagctacaagcttcactttgagttcagtcgctatctg
aacgggaacaatgttctcattcccggtacaactgctgccaacattctagtggactctatc
tccctcctccctcgttactcctccctggagatgttcatcggcggagaccccgcctccatt
gcccggaaacagagttacgagcgctaccgctgccatgacggggctaagagtgtggcacgc
ccccagatcagtgacgtctgtgccaaacacatcaccagcatgtcagccatcattaaccat
ggagctttggcttgccagtgtgacccccaggggtcagtcagctcagtgtgtgaaatgcgc
ggaggtcagtgtcgctgtaggtccaatgtgattggacggcgctgtgaccgctgtgctcct
gggacgtacggctttggacctgcaggatgtagagcctgtgagtgtagcctagaaggtgcg
gtcactcggttctgtgaccagctgactgggcagtgcccatgcagccagggtgcgtttggc
cagcggtgcgatggctgccaggcaggacactggggcttccccaactgtaagcagtgcctg
tgtaatggacatgctgaggaatgccaccagaggaccggagcctgtctcaactgcagggaa
aacactggaggggacaaatgtgacaggtgtgccaatggttactacggaaacccggtgctg
ggcacaggtaacggtaaccgatgccagccctgcccctgcccggatggcccaaacagcgga
agacacttcgctacctcctgtcaccaggacaaccgcaacagacaggtggtctgcaactgt
aaccaaggatacacaggttcccggtgtgaggagtgtgccccaggttactacggtaacccc
tcccagccaggtgggcggtgccagccgtgcaggtgcagtaacaacattgacatgtcagac
ctggatgcgtgtgaccggaggacaggagagtgtaagaagtgtctctacaacacagaggga
ccggactgtggcgtgtgcaacagcggttactatggagacgcctcgcgacgcaactgcaga
aagtgcacctgtaacttcctgggcacagcacaaacccagtgtacagcgagggatgagtgt
gtctgccagcgtgccacagggcagtgcctgtgtctacccaacactatcggcctgacatgt
gaccactgtgagcccaactactggaacctggctagtgggcggggctgtgaggcctgcggc
tgtgaacccaacaacgctgtcaacccggcctgcaacgagttcactggaaagtgtcagtgt
cgtgacggatttggtgggaagatctgcacagactgccaagagaactactggggcgaccca
aggatccagtgtagagcctgtgactgtgacccccggggcatagagacctctcagtgtggc
cagaagacaggccactgcgtgtgtcaacagggggtgtcgggcgtgcgttgtgatcagtgt
gcccggggcttctcaggccagttccctaactgccagccctgccaccagtgctttggggac
tgggaccgggtggtacagaacctggctgtccgaaccaagaccctgtcggagcgggctgtg
gagatccagaacacgggcctgactggagcctatgagaaggccttcaaagacctggaggag
aagctagcacgagctcagggcatcgtcaatgcccgcaacaccaccacagaggcagtcagc
agcctgatggagctcattgaagacctcaggtctcagataggggagaccacagatgtactg
aatcatctggagggagacctgaccagtgtagggaacagtaatgttgaggccagtaatgag
ctcagtgctctagagagagaggccaaagagctcaacctgacctcagatcagctccaccgc
caactggacatcctgaagaactctaacttcctgggtgcatatgaaagcatccgaagctcc
tataataagtcccgtgacgcagagcggcgagccaaccagtacaccactaccacgcccagc
actgtcagccaatcagcagacacccgccgcaagacagaacgcctcatctctgccaagaaa
gacgacttcaaccgcaagaacgccgccaacaagcgagccctgggcgacctcaatgccaag
gcacaaaccctggacatgaagaagatcaacgagaaggtctgtgggggccctggcgattcc
ccctgtgtagagagccattgcggaggggcgggttgccgtgacgacgaggggaacaggcac
tgtggaggcctgaactgcaacggtgccgtagcgatggcagagaacgccttggaaaagtct
aagcacgcagagaaagagctgaacatagccatgagggaggtagaggagctcttccacaag
gtggcagatgccaagaccaaggcggaggaggcaaagggtaaagcccaggcagctctggac
aaggccactaacaccaagaacaaggtggagcgctccaacaacgacctgcgggacctcatc
aagcagatccgggacttcctcatgcaggagggtgctgatccagacagcattgaaacggtg
gctaaccgtgtcctggagctgtccatcccagcctcaccacagcagatcagacacctggca
gaggagatcaaggaccgggtccggagcctctccaacgtagacgccattctgaaacagaca
caggacgacgtgcgcaaggctgagcagctgctgcaggaggccaagaaggccaggaatcgg
gcagacggggtgaaatccacagcagagacggtgaaacgggcgcttgaggacgctaagacg
gcccaggctgcagcggagaaggccatacagcgggcgaaggttgacatcggtgaaacggaa
gtccgactagcacagatcgagtctgagacctccagcagtgaacatgacctgaataatgcc
atggatcgccttggcaacctggaacgggggattgacggtctgaaactcaaacgtgcaaaa
aacagcatggcagcagctcgagctgaggagacagccactatggcacgggacaaagccaat
gatgccaagcagattttagatggcgagctgacggataagtatcacacagtacaggacttg
gtggacaggaaagccaagaccgtccaggaggccaagaagacagcagagcgcctgagagac
gaggccaaggagctactgaaagacgcgcaggacaagctccagagactagcagaactagag
aaagactatgaagagaaccagaaaaagttggagggcaaagcccggcagttggacggccta
gaagacaagatgaaggctatcctcaacgacatcaacaaacagattcagatctacaatacc
tgtcagtaa
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