Oncorhynchus nerka (sockeye salmon): 115118108 Help Entry 115118108         CDS       T07952                                  Name (RefSeq) collagen alpha-5(IV) chain-like   KO K06237   collagen type IV alpha Organism one  Oncorhynchus nerka (sockeye salmon) Pathway one04382   Cornified envelope formation one04510   Focal adhesion one04512   ECM-receptor interaction one04518   Integrin signaling one04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:one00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     115118108    04518 Integrin signaling     115118108  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     115118108   09142 Cell motility    04820 Cytoskeleton in muscle cells     115118108  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     115118108  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:one04147]     115118108    00536 Glycosaminoglycan binding proteins [BR:one00536]     115118108 Exosome [BR:one04147]  Exosomal proteins   Exosomal proteins of other cancer cells    115118108 Glycosaminoglycan binding proteins [BR:one00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    115118108 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen Motif Other DBs NCBI-GeneID:  115118108 NCBI-ProteinID:  XP_029502513 LinkDB All DBs Position Unknown AA seq 1421 aa AA seqDB search MKKNVKSLRNLAMGLMVVTLCITVQESESAACHGCATGSRCDCSGVKGVKGERGFPGLQG QLGVPGFPGPEGPIGGRGEKGSDGPSGTGGPKGIRGPPGLPGFPGTPGIPGLPGQDGPPG PKGTAGCNGTKGERGFPGSPGFPGLEGRLGPPGFPGQKGDPGDIIRSERFGQIGGAGLPG LPGVPGDQGLSGLSGPTGPPGPRGYEGRPGPPGLPGPKGNMGLNFQGPKGDKGDQGLPGP PGDPGYPGPPGSSGGLKGEKGENGEAGKRGKPGKDGDPGPAGFPGSKGDPGGPGLPGRDG DRGSKGDRGYPGRPGVQVSNGPPTVGPKGESGRPGETGRKGDRGQPGLSGPPGQPGTTGI GGGGQPGLPGFPGERGQKGDEGQPAISIPGNPGRGGAPGLQGPPGPPGPPGVSNGGINCI GGGPGLPGQQGNIGFQGETGQKGEKGDTCVNCFSRGNSVPGARGPPGPPGFPGGPGGPGA KGDRGFPGGPGPSGSSGLPGPQGAPGFPGEKGDPGEATAVNGVSGDKGDTGFPGPAGLPG LDGRPGRDGGPGAPGAKGSSGSLLVKGQRGPPGEPGLQGLPGDRGATGSPGFGPQGPPGE KGVQGVSGRTGTPGAPGGKGEPGQTVAEKGLPGPRGQDGDPGLPGNPGNPGGPGQPGFPG SPGPKGDPGLSGIGLPGPPGAKGFPGSSGLPGGPGGPGRPGVDGFPGQPGAPGAKGEPGF GLSGPQGSPGFPGDKGLPGPKGDSGFPGNPGLPGRSGFDGGPGAKGDSGIPGRTGDRGPQ GLPSIGSQGVPGPVGPPGPIGAPGYSGNNGEKGDPGLPGPGITGLPGDRGSPGFPGSPGG VGPQGNPGGPGRDGIPGLPGGKGDMGVMGTPGSLGTPGNPGGPGFPGPKGDDGFPGRPGG TGSPGLKGDRGDPGLVGLPGPSNSPPSIKGAKGDAGEPGLRGQPGQKGISGLPGDAGIPG QDGRPGLPGPQGPKGDMGIPGGSGSPGSQGLKGNMGEMGFPGPTGAKGTPGQLGRSGVPG SSGAPGFPGAKGDPGSPGFGATGATGPKGEPGRSGFPGQNGVKGTPGTPGLPGFPGGPGA KGDPGLPGFQGSPGIPGPKGLDGTPGNPGLAGGPGRPGENGRAGSPGFPGDKGQAGRDGI PGPAGVKGDQGLSGFGGPGSPGLPGSPGAKGDFGAPGLPGNPGFPGQKGEMGFPGQPGSP GSIGPPGATGVALQGPKGNSGSPGPPGRGGPPGPEGPRGLGGSGGTKGEKGIPGSSGSPG FPGAKGELGSPGFPGIPGPPGGSGLKGDIGLPGVPGFPGLKGESGSPGSSGLPGDPGDPG PAGNQGDPGVAATPIMLKGERGPPGPSGLPGNRGSQGPPGQEGRSGQPGQPGDPGPEGSP GFSGAFGRKGDSGPAGQPGQRGYPGPTGSDGQQGPPGNPGS NT seq 4263 nt NT seq  +upstreamnt  +downstreamnt atgaaaaaaaacgtaaagagtctgcgaaatctcgccatggggttgatggttgttaccctg tgtatcacggtccaggagtcggaatcagcggcgtgtcatggatgtgcaacgggatcaagg tgtgactgcagcggagtgaaaggagtcaagggtgaaagggggtttccaggactacagggt cagctgggtgtaccggggttccccggacctgaggggcccatcggtggcaggggagagaag ggtagtgacggaccttcagggactggaggtccaaaagggataagaggacctcccggactg cctggattccccggaacaccaggaattccaggtctcccgggacaggatggccccccaggc cccaaaggaactgcaggctgcaacgggactaagggtgagcgaggatttccaggaagtcca ggcttccccggactggagggtcgattgggtccacctggttttccaggacaaaagggagac ccaggtgacatcatcagatctgaacgtttcggacagataggaggtgcaggtctgcctggt ctgcctggcgttcctggtgaccaaggcctctcgggattgtccggtcctaccggccctccc ggccccagaggttatgagggtcgtcccgggcctcctggtcttcctggtccaaagggaaac atggggttgaacttccaaggtcccaaaggagataagggtgatcaaggtttacctggtcca cctggtgatcctggttatcctggaccccctggttcgtctggtggtttgaagggagagaaa ggagaaaacggagaagcaggcaaaaggggcaaaccggggaaagatggagacccaggtcct gctggattccctggtagtaagggagacccaggtgggccaggtctgccaggtcgggatggt gacaggggttccaaaggtgaccgtggatatcctggacgcccaggcgtgcaggtgagcaat ggtccacctacagttggtcctaaaggagaatctgggcgtcctggggagacgggaaggaaa ggagacagaggacagcctggtctttcgggtcctccaggtcaaccagggaccacaggtatc ggaggtggaggccagcccggtttaccaggcttcccaggagagaggggccagaagggagac gagggccagccagccatctccatccccgggaacccaggacgaggtggcgcccctggtctg cagggacctccaggacctcctgggcccccaggggtctccaatgggggtattaactgtata ggagggggccccgggttaccaggacaacaaggcaatataggattccaaggagagaccgga cagaaaggtgagaagggagacacctgcgttaactgtttctccagaggcaacagtgtccct ggagcacgaggccctcccggacctcctgggttcccaggtggacctggaggaccaggggct aaaggtgacagaggattcccaggcggcccagggccctcaggttcttctggtttgcccggt ccccagggtgctcctggtttcccaggagagaagggtgacccaggtgaggctaccgctgtg aatggggtgagcggagacaagggagacacagggtttccaggacccgctggcctgcctggt ctggacggaagacctggtcgcgatggaggtcctggagctcctggagccaaaggatcatct ggatctctattagtgaagggtcagcgaggacctccaggtgagcccggtttgcagggtctc ccaggtgacaggggtgccaccggatccccaggcttcggcccccaggggccccccggagag aagggtgtccaaggtgtctcagggagaacgggaacacctggagcaccaggaggtaaaggg gagccgggtcagacggtagcagagaagggcctcccaggaccccgaggacaggatggagac cccggtctacctggaaacccaggtaaccccggcgggccaggacagcccggtttccccggg tcaccaggtcccaagggtgatcccggcctctctggcatcggactgccaggaccccccgga gctaaaggattccctggctcatctggtttgccaggtggtcccggaggtccaggtagacca ggtgtggacgggttccccggacagccaggtgcacctggagctaagggagagccaggcttt gggctgtcaggtccccagggctcaccaggcttccccggagataaaggattacctggaccc aaaggagactctggtttccctggcaaccccggcttgccaggacgatccggctttgacggc ggccctggtgccaaaggtgactctggtatccctggtagaaccggagatcgtggccctcaa ggattaccctccatcggctctcagggtgtccccggccctgtcggacccccaggacctatt ggtgctccaggatactcaggcaacaatggagagaagggagaccccggtcttcctggcccg ggcattacagggttgccaggagacagaggaagtcccggtttccccggcagccccggggga gttggacctcagggtaaccccggtggccctggccgcgatggaatacctggcctgcctggt ggtaaaggagacatgggtgtaatgggaactcctggatctctgggaacccctggcaacccc ggagggcccggcttccctggacctaaaggtgacgatggtttcccagggcgaccaggtggg accggcagtccaggtctgaagggagacaggggagaccccggtctcgtaggactccccggg cccagcaactctcccccttcaatcaagggagccaaaggagatgcaggagaaccaggtttg cgaggtcagccgggtcagaagggtatttccggtctccctggagatgctggtataccagga caggatggaagacctgggttacctggacctcaaggtcccaaaggagacatgggtatccct ggaggctcaggctcaccaggaagccaaggacttaaaggcaacatgggagagatgggcttc ccaggacccacaggagcgaaaggaactccaggtcagctaggtcggtcaggcgtacccggt agttcaggagcaccagggttccccggagctaaaggagacccaggttcccccggatttggt gccacaggagctacaggtcccaagggtgagcctggtcggtcgggattccccggacaaaat ggagtgaaaggaactcccggaacaccagggcttccagggtttcccggtggccccggagcc aaaggcgaccccggcctcccaggattccaaggttctcccggtattcccgggcctaagggt ctggacggtacccctggtaaccccggtctcgccggaggccccgggcgaccaggagagaat ggccgtgccggatcacctgggttcccaggcgacaagggtcaggcaggtcgcgacggaatc cctggaccagcgggagtcaaaggagaccaaggtctttctggtttcggcggcccaggttct cctggtctcccagggtcaccaggtgctaagggagattttggcgcccctggtcttccaggt aaccctgggttccccggtcagaagggagagatgggcttccccggccaacctgggtccccc gggagcatcgggccccctggtgccacaggtgtggccctccaggggccaaagggtaacagt ggatcccccggcccccctggaagaggaggtcctcctggcccggagggtcctcgtggcctt gggggcagcggagggaccaaaggtgagaagggaatccctggatcttccggatcccctggt ttccccggagcgaagggagaattgggatcgcccggattcccaggtattcctggccctcct ggtggcagcgggctgaagggagacattggacttcccggcgttcccggattcccaggacta aagggagaatctggaagccctggatcatccggtctgcctggagatcctggagatcctggt cctgctggaaaccaaggtgacccaggtgtcgctgcgacccccatcatgctgaagggagaa cgtggcccccctggcccttcaggtctgccaggcaaccgtggctcccaaggaccccccgga caggagggacgctcaggtcagcccggtcaaccaggggaccccggtcctgaaggatcccca ggattcagtggagccttcggccgcaagggagactctggacccgccggacagccaggtcag cgtgggtacccaggtcccactggttcagatggtcagcagggtcccccaggtaaccccggc tca

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