Oncorhynchus nerka (sockeye salmon): 115118194
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Entry
115118194 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: host cell factor 1-like
KO
K14966
host cell factor 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03083
Polycomb repressive complex
one04980
Cobalamin transport and metabolism
one05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
115118194
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
115118194
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115118194
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
one01009
]
115118194
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115118194
03029 Mitochondrial biogenesis [BR:
one03029
]
115118194
Protein phosphatases and associated proteins [BR:
one01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115118194
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
115118194
HMT complexes
COMPASS/SET1 complex
115118194
MLL-HCF complex
115118194
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
115118194
Mitochondrial biogenesis [BR:
one03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
115118194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Motif
Other DBs
NCBI-GeneID:
115118194
NCBI-ProteinID:
XP_029502622
LinkDB
All DBs
Position
Unknown
AA seq
1726 aa
AA seq
DB search
MTSGTSGSVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHVYNTA
TNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWKRLKP
KSPKNGPPPCPRLGHSFSLVGNKCFLFGGLANDSEDPKNNIPRYLNDLYTLELRAGSSVV
GWDIPITYGVLPPPRESHTAVVYTEKTSSKSRLVIYGGMSGCRLGDLWTLDIDTLTWNKP
SINGTAPLPRSLHSATTITNKMFVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDSMA
WESVLMDSLEDNIPRARAGHCSVAINSRLYAWSGRDGYRKAWNNQVCCKDLWYLETEKPR
PPSRVQLVRANTSSLEVSWGAVPTADTYLLQLQKYDIPPAPAATTPGVSPATSLPVNSPK
SPVTASAASPQGLPLQGITLVPSPTTTMPGSPLAAANARGPAILKVSAPHSTTGTSIVTV
RQANQGGKSPVTVTSLPAGVRMVVPAQGAQGTPMGSSPQMSGMAALAAAAAATQKIPPST
ATMQLPAGATMVKTVAMSPGSQTVKVASPVMVSNPATRMLKTAAAQVGTSGVVTPGTPSR
PIITVHKSGTVTVAQQHQVVTTVVGGVTKTITLVKSPLTMGGGGTLLTAANQGQNKVMSG
KDVQHWLSNLSNLGKVMSVVQTKPGQTGTVTGQAGSSLQHIIQTKGPLPAGTILKLVTSA
DGKPTTIITTSQAGAAGGKPTILSYSGMPTTTKPGTHIIKTIPMSAIGQAGVTGSGMKSP
ITIITTKMMTPGTGTPGKIISAMPRAGAGQQGLTQVVLKGAPGQPGTILRTVPMGGVRLV
SPVTVSGVKPNVTTLVVKGTTGVTTFGTVTGTVSSSLAAGSVATATTTLGTMTTLPGQVT
VSAAQAGAPPTQVTLITTPSGVDAQPVHDLPVSILSSPTSADPSSTXSPEAGDPGTVTLV
CSNPPCETHETGTTNTATTASANMTGNGGVERVCSNPPCETHETGTTNTQTTASSNMGQV
QQVCTNPPSETHDTGTTNTQTTASCNMGSNQQQQGSSVTNNTSGSDPPSSPPPSSSGDLS
PSSVSGTSSVPGVLRPETLRTGTTYTSTTARSNMGSDQMGMTLSSSSSDNQSKSSSGGEE
EEDPPSPLLSAPIHLVKRTRLALPLRRRRPTPLLWASGRLQAQSRECVPILRVKRTKREP
PTPLSQTTSNLTGTGTVQRVCSNPPCETHETGTTNTPSQTTSNLTGTGTVQRVCSNPPCE
THETGTTNTATTAQPGDSTQGDSGTTEAPSSSSVTTESSAVVAAGRAVTTVTQSTPTPGP
SVPEISSMSGSSEAMVAACIEGEEAMQTDCLPEGTVRVVTLEEAAAAGIQVHVEGMEEQN
QGEQEGLPAELMSEGDAGGQQTLMVTGLTPEELAVTAAAEEAAQHAAAEEANAQAMAIQA
VLQAAQHAVMNEGDGGQEGQHHTTTIPIVLTQAELAALVHQQQQLQEAQALAQAAAAAAA
QHNQPTEGLAPADSLNDPASESNGQELAAAVTQAVARLAPTCTMVVTNPAKTQPMMVATP
AKTQPMMVASLAKTQPMMVATPAKTQPMMVATPAKTQPMMVATPAKTQPMMVASLAKTQP
MMVATPAKTQPMMVASPAKMQAAATLAEVANGIESAAGRQGAPPAVAKAPVKKDNQWFDV
GIVKVTNTVVTHYYLPADDQATVDVRLSHTTHTHTHYPLRTRLQFG
NT seq
5180 nt
NT seq
+upstream
nt +downstream
nt
atgacatctgggacctctggctcagttctgcagccacggtggaagcgggtgttgggttgg
tccggccctgtccctcggccccgacacggacatcgtgcagttgcaattaaagaattgatg
gtcgttttcgggggtggcaatgaaggaattgtagatgaactgcatgtgtataacacagcc
accaatcagtggttcattcctgctgtccgtggcgacatcccgcctggctgtgctgcgtat
gggttcgtgtgcgacggcaccaggctgctggtgttcggagggatggtggaatatggcaaa
tacagcaatgatctgtatgaactgcaggccagtcgctgggagtggaagcgtctgaagccc
aagtctcctaagaacggccctcctccctgtccccgcctgggacacagcttctccctggta
gggaacaaatgcttcctgttcggaggactggctaacgacagtgaggaccccaagaacaac
atccccagatacctgaacgatctgtatacgctggagctgcgtgccggctccagtgtggtg
ggctgggacatccccatcacctacggggtgttgcccccgcccagagagagccacaccgcc
gtcgtctacacagagaagacctctagcaagtcccgtctggtcatctatgggggtatgagc
ggctgtcgactgggggatttgtggacactagatatagacaccctgacatggaataagccg
tccatcaacgggacagctcctcttccccgcagtctccactctgccacaaccatcaccaac
aagatgttcgtgttcggaggctgggttcccctggtgatggatgacgtcaaagtagcgaca
cacgagaaggagtggaagtgcaccaacacactggcctgtctcaacctagactcgatggcg
tgggagtcggtgctgatggattctctagaagataacatccccagggccagggccggtcac
tgctccgtggccatcaactcacgcctctacgcctggagcggacgggacggataccgcaag
gcctggaacaaccaggtgtgctgcaaggacctctggtacctggagacagagaagccccgc
cccccgtcacgggtgcagctggtgagagccaacaccagtagcctggaggtgagctggggg
gcggtaccaactgctgacacctacctgttacagctgcagaagtacgatatcccccccgcc
ccggccgccaccacgcccggcgtcagccccgcgacgtcactaccggtcaactcccccaag
agccctgtcacagcctctgcagcgtccccccagggcctgcctctccagggcataacgctg
gtcccctcccccaccaccacaatgcctgggagtccactggctgctgcgaatgcacgtggg
ccagctatcctgaaggtgtctgctccccattccaccacaggcacctccatcgtcacggtg
aggcaggccaaccagggcgggaaatctcccgtaacggtgacatcacttcctgccggggtc
cgcatggtcgtgccggcccagggtgcacagggaacgccaatgggcagcagccctcagatg
agtggcatggctgcgttggctgcagcggctgctgccacacagaagatcccgccctccacg
gccaccatgcagcttccagctggtgctactatggtcaagaccgtggccatgagccccggt
tcacagactgtcaaagtagcctcgcctgttatggttagtaacccagcaacccgcatgctg
aagactgctgcggctcaggtgggcacgtcaggtgttgtcacacccggaacgccttctcgc
cctatcatcaccgtgcacaagtctggcacggtgacggttgcccagcaacaccaggtggtt
accacggtagtgggaggagtcaccaagacgatcacccttgtcaagagtccccttactatg
gggggaggtggaacactgctgaccgcggccaaccagggtcaaaacaaagtgatgtctggg
aaggacgtgcagcattggctgtctaacctgtccaacctggggaaggtgatgtccgtggtc
cagaccaagcctggtcagacaggaacggtgacgggacaggctggctccagcctccagcac
atcatacagacgaaaggtcccctcccggcgggcaccatcctgaagctggtgacctcagcg
gacggcaagcccaccaccatcatcacgacgtcccaggccggggccgcggggggcaagccc
accatcctatcctacagcggcatgcccaccaccaccaagcctggcacgcacatcatcaag
accatacccatgtctgccatcggacaagcaggagtgacaggaagtggtatgaagtccccc
attaccattatcaccactaagatgatgacaccaggcaccgggacaccaggcaagatcatc
agcgcaatgcccagagctggggctggtcagcagggactcacacaggtggtgctgaagggt
gcccctggacagcccgggactattttacggaccgtccccatgggaggagtacgtctcgtc
tccccggttactgtttccggtgtcaaacctaacgtcaccacccttgttgtcaagggaacc
acaggtgtgacaacgtttggtacggtgactggtacagtgtcttcgagcctggcggccgga
agtgttgccacggctaccaccaccttgggcaccatgaccactctgcctggacaggtcacc
gtctccgcagctcaggcgggagctccgcccactcaggtgaccctgatcacgacccccagt
ggtgtggatgctcagcctgtccacgacctcccggtctccatcctgtcctcccccacctcc
gccgacccctcgtccaccnncagccctgaggcaggcgacccaggaacggtaaccctggtc
tgctcaaaccccccctgcgagacccatgagaccggcaccaccaatacagctaccacggcc
tccgctaacatgactggtaatggtggggtggagagggtctgctcaaaccccccctgcgag
acccacgagaccggcaccaccaacactcaaacgaccgcgtcctccaacatgggccaggta
cagcaggtgtgcaccaaccccccgtccgagacccacgatacaggtaccaccaacacccag
accaccgccagctgtaacatgggatccaaccagcaacaacaaggctccagcgtaaccaac
aacaccagcgggtctgatcccccgtcctctccgcccccctcctcctccggagacctctcc
ccctcgtctgtttctggtaccagctctgtgcccggggtgctacgaccggagactctgaga
acagggaccacctacacctccaccaccgcacgctctaacatgggctctgaccagatgggc
atgactctcagctcctcgtcctcagataaccagagcaagtcatccagtggaggagaggag
gaggaggatcccccctcacctctcctgtctgctccaatccaccttgtgaaacgcacgaga
ctggcactaccactacgtcgacgcaggccaactccactattatgggcatcgggcagacta
caggcacagtccagagagtgtgttccaatcctccgtgtgaaacgcacgaaacgggaacca
ccaacacccctgtctcagactacgtccaacctgacagggacgggcacggtccagagggtg
tgttccaatcctccgtgtgaaacgcacgaaacgggaaccaccaacaccccttctcagact
acgtccaacctgacagggacgggcacggtccagagggtgtgttccaatcctccgtgtgag
acacacgagacgggcaccaccaacacagctactacagcccagcctggtgactcgacacag
ggagacagcggaactacagaggctccctcgtcgtcctcggtaaccacagagtccagcgcc
gtggtggcggctggccgagcagttaccacggttacccagtccacacccacacctggaccc
tccgtacctgagatctcgtcgatgtctgggtcgtctgaggcgatggtggcggcatgtata
gagggagaggaggccatgcagacggactgtctcccagagggcacagtgagggtcgtgacc
ctggaagaggctgctgcagctgggatacaggtccatgtggagggcatggaggaacagaac
cagggggagcaggagggcctgcctgcggagctgatgtctgaaggtgacgcagggggccag
cagaccctgatggtgacgggtttaacccccgaggagctggctgttaccgctgcagccgag
gaggcggcacaacatgctgctgctgaggaggcgaacgcccaggccatggccatacaggct
gtcctgcaggccgcacagcacgctgtcatgaatgaaggagacggtggccaggagggccag
caccacaccaccaccatccccattgtgttgactcaggctgagctggcagccctggtacat
caacaacaacagctgcaggaagcccaggctctggcccaggcagcggcggcggcagcagca
cagcacaaccagcccaccgagggcctggccccagcagacagcctgaacgacccggcgtca
gagagtaacggccaggagctggctgcagcagtgacccaggcggtggcccggctagcccca
acctgcaccatggtggtgacaaacccggctaagactcagcccatgatggtggccaccccg
gctaagactcagcccatgatggtggctagcctggctaagactcagcccatgatggtggca
accccggctaagactcagcccatgatggtggccaccccggctaagactcagcccatgatg
gtggccaccccggctaagactcagcccatgatggtggccagcctggctaaaactcagccc
atgatggtggccaccccggctaagactcagcccatgatggtggccagtccggctaagatg
caggcagctgcgaccctggcagaggtggctaacggcatagagtctgctgcagggagacaa
ggagctcctcctgcggtggccaaagccccggtgaagaaagacaaccagtggtttgatgtt
ggcatcgtcaaggtgaccaacaccgtggtcacacactactacctgcccgctgacgaccaa
gccactgtcgatgtaagactttcccacaccacacacacacacacacactacccgctgagg
accaggcttcagttcggctg
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integrated database retrieval system
