Oncorhynchus nerka (sockeye salmon): 115118361
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Entry
115118361 CDS
T07952
Name
(RefSeq) nuclear receptor ROR-beta-like
KO
K08533
RAR-related orphan receptor beta
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115118361
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
one03310
]
115118361
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
115118361
Nuclear receptors [BR:
one03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
115118361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
115118361
NCBI-ProteinID:
XP_029502819
LinkDB
All DBs
Position
Unknown
AA seq
503 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYSEVQKHQKNQELLNQEVVNQGCLNQG
LSLTREDVAGGDSEGDRHRELSHSYSSGGSSSTLSDLDDIPDLFDLPLTPEEAHKYCSLE
LLGGHGGSTGNTSNSSSLSSSSNNSSNQNSPQQNLLDVTDANGIKHEYQMLSHTQAALLE
PLANDCTLMDIERITQSVVKSHLETSQYSSDDLKRLTYSGIQYSPEETRNFQCKSEEFMW
QQCAHHITNAIQYVVEFAKRITGFMDLCQNDQIILLKAGCLEVLLIRMCRAFNANTNTMF
FDGKFASAQLFKALGCDDLVSAVFDLAKGLCRLQLTDEEMALFSAAVLLSPERPWLTDSQ
KVRKLQEKLFLALQHRLHMSGASDEKLDQMVSKLLMMKSICNLHVNKLEFFRLVHPETAY
SFPPLYREVFGSEISLPDSTNSS
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcaaatagaagtaataccctgcaagatctgtggggacaagtcctcaggtatt
cactatggggtcattacctgcgaaggttgcaaggggttcttccgccgcagccagcagaac
aacgccatgtactcgtgttcccgccagagaaactgtcttattgaccgaaccaaccgcaac
cgctgccaacactgcagactgcagaagtgtctggctttgggcatgagccgggacgcggtg
aagtttggccgtatgtctaagaagcagcgagacagcctgtactcggaggttcagaagcac
cagaagaaccaggagcttctgaaccaggaggttgtgaaccaggggtgtctgaaccagggt
ttgtccctgaccagggaagatgtggcagggggagacagcgagggggacaggcacagggag
ctcagtcactcctacagcagcggcggctccagctccaccctgagtgacctggatgacatc
cctgacctgtttgacctgcccttgaccccggaggaggcccacaagtactgcagcctggag
ctgctgggaggccacggcggaagcaccgggaacacctcaaactcttcatcattgtcatca
tcctctaacaattcgtccaatcagaactcgccgcagcagaatctgctggatgtcacagac
gccaatggaatcaaacatgagtaccagatgttgtcgcacacacaagccgcgctgctggag
ccactggccaatgactgcactcttatggatatagagcgtatcacccagagtgtggtcaag
tcccacttggagacgagtcagtacagttctgacgacctgaagaggctgacatacagtggg
attcagtactcacctgaggagacccgcaacttccagtgcaagtctgaagagtttatgtgg
cagcagtgtgcccaccacatcaccaatgccatccagtacgtggtggagtttgccaaacgc
atcactggcttcatggacctgtgtcagaacgaccaaataattctgctcaaagcaggctgt
ctggaggtgctgttgatcaggatgtgcagggcgtttaacgctaacaccaacaccatgttc
tttgatggcaagtttgcctccgcccagctcttcaaagccctcggttgcgatgacctggtc
agtgccgtgtttgatttggctaaaggactctgccgcttgcagctaaccgatgaggaaatg
gctctgttcagcgccgctgtccttctgtccccagagcgaccatggctgaccgacagccaa
aaggtccggaagctgcaggagaagctcttcctggctctgcaacacagactgcacatgagc
ggggcctctgacgagaaactagaccagatggtgtccaagctgctgatgatgaagtccatc
tgtaatctccacgtcaacaagctggagttcttccgtctggttcaccccgagaccgcatac
agcttcccaccactctatcgggaagtgttcgggagtgagatctctctccccgactctaca
aacagctcctag
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