Oncorhynchus nerka (sockeye salmon): 115118544
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Entry
115118544 CDS
T07952
Name
(RefSeq) leucine-rich repeat-containing protein 4B-like
KO
K16360
netrin-G3 ligand
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04514
Cell adhesion molecule (CAM) interaction
one04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
115118544
04517 IgSF CAM signaling
115118544
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115118544
Cell adhesion molecules [BR:
one04515
]
Immunoglobulin superfamily
NGL family
115118544
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_9
LRR_14
ig
LRR_1
V-set
Ig_2
LRR_NXF1-5
LRR_LRWD1
VEGFR1-3_N_Ig-like
LRR_EndoS
LRRNT
Motif
Other DBs
NCBI-GeneID:
115118544
NCBI-ProteinID:
XP_029503046
LinkDB
All DBs
Position
Unknown
AA seq
733 aa
AA seq
DB search
MRITTVTCLPCPSPLLLLLVQLLLRLLLYGPEFVEAASPCPTHCSCSNQASRVICTRQSL
DGVPESISVNTRYLNLQENSIEVIKSDTFKHLRHLEILQLSKNKISQIEVGAFNGLPNLN
TLELFDNHLTLVPSQAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDY
ISDAAFVGLVNLRYLNLGMCGLKDIPNLTALVRLEELELSGNRLEIIRPGSFQGLVSLRK
LWLMHSQVKVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWVCNC
DVLWLSWWLKETVPSNTTCCARCHAPPGLKGRYIGELDQSHFTCYAPVIVEPPTDLNVTE
GMAAELKCRTGTTMTSVNWLTPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTCM
VTNSAGNTTATAVLNVTAADVGVSYFTTVTVETVEPNEGPTVYAGVMNSHNESYVITPSG
HQWRGGLPTTASSLSAWSLSSSRATRPTFTVPITAETGYSGLDDVMKTTKIIIGCFVAIT
FMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDEIGAGAGGRGSGISGGGTVSRDGG
GGGGVGGGQSLRMHHPEMVNLPNLARQEHLNHYYKAHHFNNNMMGLGMGLNNNNNPSLSP
CSQNQSTPNSCTQGPTSTSGGTPTGGSLPSPVPLPQLGIHSSLKGLMGKGQNPQIEPLLF
KSGSKENVQETQI
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcaccacggtgacctgccttccctgcccctctcccctcctcctcctattggtc
cagctgctactgcggctcctcctctatgggccagaatttgtagaggccgcctccccctgc
cccacccactgcagctgctccaatcaggccagtcgagtcatctgtacaagacagagtctg
gatggggtgcctgagagcatatcagtcaacacacgatacctcaacctgcaggagaattca
atagaggttatcaagtcagacaccttcaagcacttgaggcaccttgagatcctgcagctg
tctaagaacaaaatcagtcagattgaggtgggagcattcaatggcctgcccaacctcaat
acgctggagctgttcgacaaccacctcaccctggtcccctcacaggccttcgagtacctc
agcaagctgcgggagctgtggttacggaacaaccccatcgagacgctgccgggctacgcc
ttccaccgcgtgccctcgctgcgccggctggacctgggagagctcaagaagctggactac
atctcagatgccgccttcgtgggcctggtcaacctgcgctacctgaacctgggcatgtgt
ggtctgaaggacatccccaacctgacggccctggtgcgtctggaggagctggagctgtct
gggaaccgtctggagatcatccggcctggctccttccagggcctggtgtcgctccgtaag
ctgtggctcatgcactcgcaagtgaaggtcattgagcgcaacgccttcgacgacctgaag
aacctggaggagctcaacctttcacacaactccctgcactcgctgccccatgacctcttc
accccgctgcaccagctggagcgggtgcacctcaaccacaacccctgggtgtgcaactgt
gacgtgctgtggctcagctggtggctgaaggagacggtgcccagtaacactacgtgctgc
gcccgctgccacgctccccctggcctgaagggcaggtacatcggggagctggaccagagc
cacttcacctgctacgctcccgtcattgtggagccgcccaccgacctcaacgttaccgag
ggcatggctgcagagctgaagtgtcgcacgggcaccaccatgacctcggtcaactggctc
acgcccaacggcaccctgatgacccacggctcctaccgggtccggatctccgtgctgcac
gacggtacgctcaactttaccaacgtcacactgagggacacgggtcagtacacctgcatg
gtgaccaactcggctggcaacaccacggcaaccgccgtgcttaatgtcactgccgccgac
gttggcgtcagctacttcactactgtcaccgtggagacggtggagcccaacgagggcccg
acagtctacgcgggcgtcatgaatagccacaacgagtcatacgtcattaccccgtctggc
caccagtggaggggggggctccctactaccgcctcctccctgtcagcctggtccttgtcc
tcgtcccgggccacccggcccacctttactgtgcccatcactgccgagacgggctattct
ggcctcgatgacgtgatgaagaccaccaagatcatcattggctgcttcgtggccattacc
ttcatggcagccgtgatgctggtggtcttctacaagctgaggaagcagcaccagctgcac
aagcaccacggccccgcccgcgccatcgagatcatcaacgtagaggacgagattggcgca
ggtgctggtggacgcgggagcggcatctcagggggcggcaccgtctctcgggatggaggc
ggagggggaggagtaggaggagggcagagcctgaggatgcatcacccggagatggtcaac
ctgcccaacctggccagacaggagcacctcaaccactactacaaggcccatcacttcaac
aacaacatgatgggcctgggcatgggcctcaacaacaacaacaacccctccctctccccc
tgttcccagaaccagagcacccccaactcctgcacacaggggcccacctccaccagtggt
ggcacccccacgggtggctcgctgccctcccctgtgcccctgccccagctgggcatccac
agctctctgaaggggctcatggggaaaggccagaaccctcagatcgagcctctgctcttc
aagagtggctccaaggagaatgtgcaagagactcagatctga
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