Oncorhynchus nerka (sockeye salmon): 115118555
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Entry
115118555 CDS
T07952
Name
(RefSeq) cytoplasmic polyadenylation element-binding protein 4-like isoform X1
KO
K02602
cytoplasmic polyadenylation element-binding protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04114
Oocyte meiosis
one04914
Progesterone-mediated oocyte maturation
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09143 Cell growth and death
04114 Oocyte meiosis
115118555
09150 Organismal Systems
09152 Endocrine system
04914 Progesterone-mediated oocyte maturation
115118555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115118555
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
115118555
Factors involved in mRNA localization
Trans-acting binding proteins
115118555
mRNA cycle factors
P-body specific factors
115118555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_7
CEBP_ZZ
RRM_1
zf-U1
Motif
Other DBs
NCBI-GeneID:
115118555
NCBI-ProteinID:
XP_029503054
LinkDB
All DBs
Position
Unknown
AA seq
743 aa
AA seq
DB search
MDDYGFGVLVKNNGSGNKSAFPVRIPPHLQPQPPHLNHPPSPPSFVNSTSATNGGGSAWL
FPSVTPHSNMQDEILDSDKSKALDLQDLQEKAQPQALSPGQQEAGGGLGELDGILPEDGS
LEKGSLETGGKEKLRGGMDSPPALGGFDYQDSLGMGTSGAQSTTTSSLTSFNNWSPTIPS
NPSPVIGEDVGGGFFGPAGSNANGPQMLFQNFSHHAGPGFGGAGGSFSPQIGPVSQHHPP
PHHYHPHNQGVPPQHRRSPASPHPPQPSFPPHRSGAFTQLPHLAPAQSKPPSPWGSYQSP
APPTSTSWSPGGGGYGGWGGSQGVREYRRGLNGGVTALNSISPLKKSFPNNQVPSQKYPR
NNSGFNQKAWMEDSMSRTDNFPFQQERTRSFDGFSMHSLENSLIDIMRAEQDSLKGRYGF
SHQGGDGSLPMNARSYGRRRGHSNLFPMEDERSFGEDESGDQGLPGLGSAHCFPHLNGER
VERYSRKVFVGGLPPDIDEDEITASFRRFGHLFVDWPHKAESKSYFPPKGYAFLLFQDES
SVQALIDACIEEDGKLYLCVSSPTIKDKPVQIRPWNLNDSDFVMDGSQPLDPRKTIFVGG
VPRPLRAVELAMIMDRLYGGVCYAGIDTDPELKYPKGAGRVAFSNQQSYIAAISARFVQL
QHGEIDKRVEVKPYVLDDQLCDECQGTRCGGKFAPFFCANVTCLQYYCEYCWAAIHSRAG
REFHKPLVKEGGDRPRHISFRWN
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggacgactacggcttcggggtcctggtgaagaataacggcagtggcaacaagtctgct
ttccctgtgaggatcccccctcacctccaaccccagcccccccacctcaatcaccccccc
agccccccttcattcgtcaacagcacctcggccaccaatggaggaggtagcgcatggctg
ttcccctccgtaacaccccacagtaacatgcaggatgagatccttgactccgacaagtcc
aaagccctggacctccaggacctgcaggagaaggcccagccgcaggccctctcccctggg
caacaagaggccggaggtggcctaggggagctggatggaatcctacctgaggacggctcc
ctggagaagggctcgttggagaccggtgggaaggagaagcttaggggtgggatggactct
cctccggcgttgggggggtttgactaccaggatagcctggggatggggacatccggagcc
caatctaccaccacctcctccttgacctccttcaacaactggtccccgaccataccttcc
aacccctcccccgttatcggcgaggacgtcgggggtgggttctttggcccggctggttcc
aacgctaacggaccccagatgctgttccagaacttctcccaccacgcggggcccggcttc
ggaggggcggggggcagcttctccccccaaatcggcccggtctcccagcaccaccctcct
ccccaccactaccacccccacaaccagggggtcccccctcagcaccgtcgctctccagcc
tccccccaccctccccagccctccttccctcctcaccgctctggagctttcacccagctg
ccccacctggccccggcccagtccaagcccccctccccttggggcagctaccagagccct
gccccccccacttccacctcctggagccccgggggaggtgggtacgggggctggggaggg
tcacagggggttcgtgagtaccgcaggggcctcaatggaggggtgacggccctcaactcc
atctcaccacttaagaagtctttccccaacaatcaggtgccctctcagaagtatcctcgt
aataactctgggttcaaccaaaaggcctggatggaagacagcatgagtcgcactgacaac
ttccctttccagcaggagagaacccgttcctttgatggcttcagcatgcactccctggag
aacagtctgattgatattatgagggctgaacaggattcattgaaaggtcgctatggtttc
tctcaccagggcggagatgggtctttgcccatgaatgctaggagctatggcagacgacga
ggtcactctaacctgtttcccatggaggacgagcggtccttcggagaggacgagtcaggt
gaccagggacttcctggtttaggatccgcccactgtttcccacacctcaacggagagcga
gtggagagatactcacgcaaggtgtttgtgggaggactgccccccgatatagatgaagat
gagatcaccgccagtttccgccggttcggtcacctgtttgttgattggccccacaaagct
gagagcaagtcctatttcccacccaaaggttatgcattcttactgttccaagatgagagc
tctgtccaggctctgatcgatgcctgtatcgaggaggatggcaagctctacctctgtgtc
tccagccccaccatcaaggacaagcctgtccagatccgtccctggaacctgaacgacagt
gattttgtgatggacggctctcagcctctggaccccaggaagaccatcttcgtagggggg
gtgccacgtcctctacgtgcagtggagctggccatgataatggatcgtctgtatggagga
gtgtgttacgctggcatcgacacagaccctgagctgaagtaccctaaaggagcgggccgt
gtggcattctccaatcagcagagctacatcgctgcaatcagcgctcgattcgttcagctg
cagcacggcgagatcgacaaacgggtggaagtgaagccatatgtgctggatgaccagctg
tgtgatgagtgccaggggacacgctgtggggggaagttcgctcccttcttctgcgcaaac
gtcacctgtctccagtactactgtgagtactgctgggccgccatccactcccgtgccgga
cgagagttccacaagccactggtcaaggaggggggagaccggccccgacacatatccttc
aggtggaattag
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