Oncorhynchus nerka (sockeye salmon): 115118591
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Entry
115118591 CDS
T07952
Symbol
lsm7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03018
RNA degradation
one03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115118591 (lsm7)
09123 Folding, sorting and degradation
03018 RNA degradation
115118591 (lsm7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115118591 (lsm7)
03041 Spliceosome [BR:
one03041
]
115118591 (lsm7)
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115118591 (lsm7)
mRNA degradation factors
5'-3' decay
Lsm complex
115118591 (lsm7)
Spliceosome [BR:
one03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
115118591 (lsm7)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
GPAT_C
RimP_C
Motif
Other DBs
NCBI-GeneID:
115118591
NCBI-ProteinID:
XP_029503116
LinkDB
All DBs
Position
Unknown
AA seq
107 aa
AA seq
DB search
MADRNKEGEKKKKESIFDLSKYIDKQIRVKFQGGREASGVLKGFDPLLNLVLDSTIEYLR
DPDDQFKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDG
NT seq
324 nt
NT seq
+upstream
nt +downstream
nt
atggcggacagaaacaaggaaggagagaagaaaaagaaggagagcatctttgacctgtcc
aagtacatcgataaacaaatccgtgtcaagttccagggaggacgagaggccagtggagtc
ctaaaggggtttgaccccctgttgaacctggtattggacagcaccatcgagtacttgcga
gaccctgacgaccagttcaagctgaccgaggacacgcgacagctgggcctggtggtgtgt
cgagggacctcagtggtgctcatctgtcctcaggatggcatggaggccatccccaacccc
ttcatacaacagcaggatggatag
DBGET
integrated database retrieval system
