Oncorhynchus nerka (sockeye salmon): 115118682
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Entry
115118682 CDS
T07952
Name
(RefSeq) nuclear receptor subfamily 6 group A member 1-A-like
KO
K08561
germ cell nuclear factor
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115118682
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
one03310
]
115118682
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys4 germ cell nuclear factor
115118682
Nuclear receptors [BR:
one03310
]
6. Germ cell nuclear factor
6A. Germ cell nuclear factor receptor
115118682
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
115118682
NCBI-ProteinID:
XP_029503232
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Position
LG4:4638931..4678429
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AA seq
454 aa
AA seq
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MDTWEDDQADPRLCLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCEMSR
KQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVEISNEEMERIMTGQEFKEDA
GLPEHTWGNNGDSDHSSPDNGVSEGNQPSPVSTLSSSKSLEMNSYTATYRDQYVGTPVSS
HYKFLPHLFGYAQSVLRPTLARSLYSQSQTLVSQLVAAEDLAPLGTPMLIEDGYRVTQGE
LFALLCRLADELLFRQISWIKRLPFFCELSIEDYTLLLSATWQELILLSSLTIYSGQMFG
DLANITTKYSPSDYELQGFSEDGMDVMERLIYLFRKFNQLKVSNEEYACMKAINFLTQDI
RGLANVSQLEKLNKRYWYVCQDLAEYKYPHQPKRFPEIMMCLPEIRHIAGKLVNVPLEQL
PLLFKAVLHSCKFSPNTLRAGTTTCLTTGLIPGN
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atggatacatgggaagatgatcaggctgacccgcgcttgtgcctcatctgtggcgaccgt
gcgacgggcctgcactatggcatcatctcctgcgagggctgcaagggcttcttcaagcgc
agcatctgcaacaagcgcgtctaccgctgcagccgcgacaagaactgtgagatgtcgcgc
aagcaacgcaaccgctgccagtactgccgcctgctcaagtgcctacagatgggcatgaac
cgcaaagcaatcagagaggatggaatgccagggggaaggaataagagcattggacctgtc
gagatttcgaatgaagaaatggagcgcattatgacaggccaggagttcaaggaggatgct
ggtttgccagagcacacctggggaaacaacggggacagcgaccacagttcccccgacaat
ggtgtctccgagggcaaccaaccctcgccggtctccaccctgtcgtccagcaagtccctg
gaaatgaatagctacactgctacctaccgggaccagtacgtgggcacgcccgtgtcctca
cactacaagttcctgccgcacctttttggttatgcccagtcagtccttaggcccaccctg
gcccgcagcctgtactcccaatcacagacccttgtctcccaactggtggcagctgaggac
ctggcccccctggggacccccatgctcatagaagatgggtacagggtgacccagggggag
ctgtttgccttgctctgtcggctggcagacgagctgctatttcggcagatctcctggatc
aagcggctgcccttcttctgcgagctgtccatcgaggactacaccctgctgctcagtgcc
acttggcaggagctcatcctgctctccagcctcaccatctacagcggccagatgttcggg
gacctggccaacatcaccaccaagtactcaccctctgactacgagctccaagggtttagt
gaagatggaatggatgtgatggagagactgatatacctgttccgcaaatttaatcagctg
aaggttagcaatgaggagtatgcctgtatgaaagccatcaacttcctcacccaagatatc
cgagggcttgccaacgtttctcagctggagaagctgaacaagcgctactggtatgtgtgc
caggacctagctgagtataagtaccctcaccagcccaaacgcttccctgagatcatgatg
tgcctccctgagatccgccacattgccgggaagctagtgaacgttccgttggaacagctc
cccctgctgtttaaggccgtcctacactcctgcaagttcagccccaacaccctccgagca
ggcaccaccacctgcctgacaacaggcctcatccccggcaactga
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