Oncorhynchus nerka (sockeye salmon): 115118724
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Entry
115118724 CDS
T07952
Name
(RefSeq) cartilage intermediate layer protein 1-like isoform X1
KO
K24436
cartilage intermediate layer protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115118724
Domain-containing proteins not elsewhere classified [BR:
one04990
]
Thrombospondin domain-containing proteins
Other thrombospondin domain-containing proteins
115118724
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CILP_C
CILP_8th
CILP
CILP_5th
Mucin2_WxxW
Ig_3
I-set
Ig_2
CarboxypepD_reg
CarbopepD_reg_2
TSP_1
ig
TSP1_spondin
TSP1_CFP_C
V-set
Motif
Other DBs
NCBI-GeneID:
115118724
NCBI-ProteinID:
XP_029503280
LinkDB
All DBs
Position
Unknown
AA seq
1172 aa
AA seq
DB search
MCCLSTWALLLALGVTTTAQGTWRRDSLRAARQNNPAVYHSEDNYEWTTWFNVDHPGGRG
DYEQLDAIRFYYRARVCDAPRALEARTTDWIPARNTGEKIHADPTLGFWCANAEQAPGRN
CSNYAVRFLCPKGQSGNTGSEGSQDAWGPWSDWSHCSAKCGQVAMQVRSRKCQSQPKQCS
GPTVEGRACKGPECPGTGCTLHCEMGRMNAECDACMCQDHIVLGSVRSAGGLPAPGATIL
RFGPSSKLLTLTDHNGHFRIPGICPDGNATLTVQLRNHAPHTVTVPHSTEHTSVLSIMLK
RAEKLHVVKNPENKARREGQTAALCCKVGGSPEPEEYQWFHNGSLLDRKQLNYDSMLVLR
NLSMEQTGEYYCRASNQAGAIKSKPAIVTVLGKDQPSCNPKPESYLIRLPHDCYQNSSDS
LYYDVGKCLSGTCAGQLDNGIRCKDSVAYCCGVAKMEEKQLKCQGYELPTMVVTGCGCQK
CVETRVIVRGRAVAADTGEPMRFGHVYINGARVSRTGYKGTFSIQVPHDTERLVMTFVDN
MDKFVNTTKVLPFNTKGGAVYHEIKLLRKKEPVTISSTELNTLQLGEVEGQDPIAEIQIP
PNSFYKQSGEVFVGNVKASITFLDARDVSTAAAAQSDLNFVGEEGDTLPLRTYGMFSVDF
RDEEAGEPLNAGEVKVKMDSTQVKMPEHLDTMKLWSLNPDTGMWEEEGSFQMEKKQRGKR
EERTFLIGNMEIRERRLFNLDVPENRRCYIKVRGFRSDRFMASEQVEGVVVTLINMEPTA
GYSSNPRAWGRFDSVITGPNGACLPAFCDDQKADAYSAHVMANMGGEELEAVPSAPKFNP
NIIGVPQPYLGKLNYRRSDHNDPRLKKTAFSINVAKPSPNTAEELNGPVYSFDQLKECEE
APFTAGHFRFTRVEGDRYDYNTVPFNEDDPMSWTEDYLSWWPKPMEYRACYVKVKINGPH
EINMRSRNQGGTHPKTVGQLYGLRDTRSIRDMDQSTVSAVCLEFKCSGMLYDQDRVDRTL
VKVIPQGSCKRDNVNSMLQEYLINHLPLAVNNDTNEFTMLAPLDPLGHNYGIYTVTDQDP
RTAKEIALGRCFDGTSDGTSRVMKSNEGVALTFTCGNREVTRQSVFQALQNSPGQSSARA
VRDGRGRKQRAGANALRNSRRRSTRNPTRTSG
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgtgctgcctgtcaacatgggctctcctcctagctctgggagtcaccactacggcacaa
ggaacatggaggagagacagtttgagagctgcaagacaaaacaaccctgcagtgtaccac
tctgaagataactatgagtggaccacttggttcaacgtggaccaccctggaggtcgagga
gactatgagcagttggatgctatccgtttctactaccgtgcgcgggtgtgtgacgccccc
cgggccctggaggctcgcaccactgactggatccccgctcgcaacacgggggagaagatc
cacgcagaccctaccctgggcttctggtgcgccaacgctgagcaggcccctggccgcaac
tgctccaactacgctgtgcgcttcctgtgccctaaaggtcagtctggcaacactgggtca
gaaggctctcaggatgcctggggtccttggtcagactggagccattgctctgccaagtgt
ggtcaggtggcaatgcaggtgcgctccaggaaatgccagtcccagcctaagcagtgcagc
ggacctacagtggagggtagagcctgcaaaggacctgaatgccctgggactggttgcaca
ctgcactgcgagatgggtaggatgaatgcggagtgtgacgcctgcatgtgtcaggaccac
attgtactgggctctgtccgcagtgctgggggtctccctgccccaggggccaccatcctc
cgcttcggccccagctccaaactcctcaccctcactgaccacaatggacacttccgcatc
ccagggatctgtcccgacggcaacgccacactgaccgtccagctgcggaaccacgcccct
cacacagtcactgtgccccacagcaccgaacacacctctgtcctcagtatcatgctgaaa
agagcagagaagctccatgtggtgaagaaccctgagaacaaggcaagaagagagggccag
acagctgctctctgctgcaaagtgggtggatcaccagagccagaagagtaccagtggttt
cacaacggcagcctgctggacaggaagcagctgaactatgacagcatgctggtcttaaga
aacctgagcatggagcagactggggagtactactgcagagccagcaaccaggctggggcc
atcaagtccaaaccagccatagtcacagtcttaggtaaagatcaaccttcatgtaaccca
aaacccgaatcctaccttattcgcttacctcatgactgctatcaaaacagctcggactca
ctctattacgacgtaggaaagtgcctctcagggacttgtgcaggacagctggacaatgga
atcaggtgcaaagactccgtggcatactgctgtggggtggcaaagatggaggagaaacaa
ctgaaatgccagggttatgagctccccaccatggtggtgaccggatgtggctgtcagaag
tgtgtggagaccagagtcattgtgcgtgggcgggctgtggccgcagacactggggagccc
atgagatttggtcacgtctacatcaatggagccagagtcagccgcacaggctacaaaggc
accttctccatccaggtcccccatgacactgagaggctggtgatgacctttgtggacaac
atggataagttcgtcaacaccaccaaggttcttccattcaacaccaaagggggcgccgtc
taccatgagatcaagcttttgaggaagaaggaaccagtgaccatcagctcaacagagctc
aacactcttcagctgggagaggtggaaggccaggatcctattgctgagatccagatccca
cccaactccttctacaagcagagtggagaagtatttgtgggtaatgtgaaggctagcatc
acttttctggacgctagagacgtgtccacagcagcagccgcacagagtgacctcaacttc
gtaggagaggagggtgacaccttgcccctaagaacctatggtatgttctcagttgacttc
agggacgaggaggccggagaaccactgaacgccggagaggtgaaggtaaaaatggattca
acacaggtgaaaatgcctgagcacctggacaccatgaagctgtggtccttgaaccccgac
acaggcatgtgggaggaggaggggagcttccagatggagaagaagcaacgtggtaaaagg
gaagagaggaccttcctcattggaaacatggagatcagagagaggaggctgtttaacctg
gacgtcccagagaacaggaggtgttacatcaaggtgcgaggcttccgcagcgatcgcttc
atggccagcgagcaggtagagggagtggtggtgaccctgatcaacatggagcccactgca
ggttactcctccaaccctcgtgcctggggacgctttgacagcgtaatcactgggcccaat
ggtgcctgtctgcctgccttctgcgacgaccagaaagctgacgcatattctgcccatgtc
atggccaacatgggaggagaagaactcgaggcagttccatctgctcccaagtttaacccc
aacatcattggagtccctcagccatacctgggcaagctgaactacagacggtcagaccac
aatgaccccaggttaaagaagacagccttcagcatcaatgtggccaagcccagcccaaac
acagctgaagagctcaacggacctgtgtactcatttgaccaactgaaagagtgtgaggaa
gccccatttactgcaggccacttccgcttcaccagagtggagggagatcgctacgactac
aacacagtgcctttcaacgaagacgatcctatgagctggacagaagactacctgagctgg
tggcccaagcccatggagtaccgagcctgctatgtcaaggtcaagatcaatggtccccat
gagatcaacatgcgctcccgaaaccagggcggcactcacccaaagaccgttggccaactg
tatggcctccgcgacacccgcagcatccgcgacatggaccagtccaccgtctctgctgtg
tgcctggagttcaagtgcagcggcatgctctacgaccaggaccgagtggaccgcactctg
gtgaaggtgatccctcagggcagctgtaagagggacaatgttaactccatgcttcaagag
tacctaattaatcacctgcctctagccgtcaacaacgacaccaatgagttcacaatgctg
gcaccactggaccctctgggccacaactatggcatctacacagtaacagaccaggacccc
cgcacagctaaagagatagcactgggacgctgctttgatggcacctctgacggcacttcc
cgtgtcatgaagagcaacgagggagtggcacttacctttacctgtggcaaccgtgaggtg
acccgtcaaagcgtgttccaggctctgcagaactccccggggcagtcttcggcgagggca
gtgagggatggccgaggcaggaagcagagagcaggagccaatgcactccgcaacagccgt
agacgcagtactcggaatcccacacgcacctcaggctaa
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integrated database retrieval system
