Oncorhynchus nerka (sockeye salmon): 115118964
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Entry
115118964 CDS
T07952
Name
(RefSeq) E3 ubiquitin-protein ligase RNF13-like
KO
K15692
E3 ubiquitin-protein ligase RNF13 [EC:
2.3.2.27
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115118964
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115118964
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115118964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PA
zf-RING_2
zf-rbx1
DUF7027
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
PHDvar_NSD
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
115118964
NCBI-ProteinID:
XP_029503549
LinkDB
All DBs
Position
Unknown
AA seq
391 aa
AA seq
DB search
MLLSLGMLMLSATQIYTIFTVQLFAFLNLLPVEADISAYTFDNKTGNFDDLPARFGYRLP
SDGLKGFLIGARPENACEPIDPPPIRDNLTGAFIVLIKRFDCNFDIKVLNAQKAGYKSAI
VHNVDSDDLISMGSNDLDILKQIDIPSVFVSEETANSLKEDYTYDKGGHVVLMPDFSLPL
EYYLIPFLITVGICLILIVVFMITKFVQDRHRARRSRLRKDQLKKLPIHKYKKGMEGKSY
RHGNLDSFVLSMGMALPSCCVNALILLHLSLPVAYHSKCVDPWLTKTKKTCPVCKQKVVP
SAGDSDSEDDSGTEENEVSESTPLLRSMASASGHSFGATTGASRSEPDQESSEYEDTSDD
SEEDVTVETETVVVQLQEPRPDDHDAPDWLA
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgctgctctcccttgggatgctgatgctgtctgccacacagatctacaccatcttcacc
gtgcagctcttcgccttcctcaacctgcttcccgttgaggccgacatctctgcctacaca
tttgacaacaagacaggtaattttgatgacctgcctgcacgctttgggtaccggctgccc
agcgatggactcaagggctttctgattggtgcacggcccgaaaatgcctgcgagcccatc
gacccgccccctatccgggacaacctcactggcgccttcatcgtgctcatcaagcgcttc
gactgtaactttgacatcaaggtgcttaatgcccagaaggccgggtacaagtcggccatt
gttcacaacgtggactctgatgacttaatcagcatgggatccaatgatctggatattttg
aagcaaatcgacattccatcagtgtttgttagtgaagagactgccaactccctgaaagaa
gactacacatacgacaaggggggtcatgtggtcctcatgccagacttcagcctgcctctg
gaatactacctgatccccttcctcatcaccgtgggaatctgcctcatcctcatcgttgtt
ttcatgatcaccaagtttgtccaggacagacacagggctcggagaagccgtttgcgcaag
gaccaactgaagaaactccccattcacaagtacaagaaaggtatggagggaaaaagctat
cgacatggcaatctggacagttttgtgttaagcatggggatggcactcccctcatgttgt
gtaaatgccctgatcttgttacatctctccctccctgtagcttaccacagcaaatgcgtg
gacccctggctaaccaagaccaagaagacatgtcccgtgtgcaagcagaaggtggtcccc
tccgcaggcgactcggactcggaggacgacagcggcaccgaggagaacgaggtgtctgag
agcactccactgctgcgctccatggcctccgccagcggccactccttcggcgccacgacg
ggggcctctcgctccgagcccgatcaggagtcctcggagtacgaagacaccagcgacgac
agcgaggaggacgtcaccgtggagactgagacggtggtggtccagctgcaggagcctcgt
cccgatgatcatgacgcgcctgattggttggcctga
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