Oncorhynchus nerka (sockeye salmon): 115119114
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Entry
115119114 CDS
T07952
Name
(RefSeq) leucine-rich repeats and immunoglobulin-like domains protein 3
KO
K24610
leucine-rich repeats and immunoglobulin-like domains protein 1/3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
115119114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
ig
Ig_2
LRR_5
LRR_1
LRR_9
V-set
LRR_14
C2-set_2
C2-set_3
LRR_Zer-1
LRR_LRWD1
Beta_helix
Receptor_2B4
Motif
Other DBs
NCBI-GeneID:
115119114
NCBI-ProteinID:
XP_029503717
LinkDB
All DBs
Position
Unknown
AA seq
1123 aa
AA seq
DB search
MSASMQPFNAAMYVVVFVLFSRIELILGYDENTRTCPSPCTCVGDLLDCSRLKRRGIPEN
LPEWTVQLDLSHNKLQSLDSTVFRKLRHLSEIKLNNNEFETVPDLGPHAANITTLILANN
RITQISLEQLRPLQGLETLDLSNNSIVDIKADSFPALPLKNLIMNNNRISTLETGCFVNL
SSTLQVLRLNRNRLSTIPAKIFQLPNLQHLELNRNRVRRVEGLTFHGLHSLRSLKIQRNG
ISRLMDGAFWGLSNMEVLQLDYNNLTEVSKGWLYGLLTLQQLHLGHNAISRIQPDAWEFC
QKLSELDISSNHLTRLEESSFVGLSLLDELHIGNNRVSFIADGAFRGLSHLQMLDLQNNE
ISWTIEDMNGPFSALDKLRKLFLQGNQIRSVTKKSFSGLDTLEHLDLSNNAIMSVQGNAF
VQMKKLEELHLNTSSLLCDCQLKWFPLWVAEQAFLPYVNASCAHPLMLKGKSVFTVRQED
FVCDDFPNPQITVQPETQSAIKSTNVTFVCSAASSSDSPMTFAWKKDNEVLNDAEIHNQA
HLRAQGGGQGRETEVTEYTTTLQLRSVEFTSEGKYQCVISNHFGSSYSTKAKLTVNMLPS
FTKMPMDLSIRAGATARLECAAVGHPSPQIAWQKDGGTDFPAARERRMHVMPEDDVFFIV
DVKTEDIGLYSCTAQNTAGAISANATLTVLETPSFLRPLMDRTVAKGETAVLQCIAGGSP
SPRLNWTKDDNPLVVTERHFFAAGNQLLIIVDAAEDDAGMYTCEMSNTLGTQRGNVRLAV
LPNPNCDVGVGASGGVGSDEDGWTTVGIVIIAVVCCVVGTSLVWVVIIYHTRRRNEDCSV
TNTDETNLPADIPSYLSSQGTLADRQDGYVPSESGSGNHQFMASSMIGFYMQPKDMNGLC
QLDTGSEADMEAAIDPLLCHYQGPISSLLRRGNMYTEESSEAFTGCAMDQRPICIDSYSG
SLTSSKRRNYYPCGGALQDPFDHGSPSVLMQMPNGSSFHGPHHLQGEGPPSMDEGDGSEY
GRPRETRLSSSNTFMGTFGKAPWRPQQELYPGFGPPPLALHNSMMLHENPYAALDTDSER
EEDKNSVQSKNSKSESEKSGNNIYEKPYDLHRTATSQQGRVST
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcatctatgcagcctttcaatgctgcgatgtatgtggtcgttttcgtactgttt
tcccgaatagaacttatacttggatatgatgaaaacacaaggacgtgtccgtctccgtgc
acatgtgttggagaccttttggactgcagtcggttgaaaaggcgtggaattcctgaaaat
cttcccgaatggaccgtacaattggacctgagccataataaattgcagtcgctcgacagc
actgtgtttaggaaactgcggcacttaagtgagataaagctaaacaacaatgaatttgag
actgtacctgatttgggccctcatgcggcaaacatcaccaccctcattctagcaaacaac
aggatcacgcagatctctctggagcagctgaggcccctgcaaggcctggagaccctggac
ctcagcaataacagcatagtggatatcaaggctgactccttccctgcgctgcctctcaag
aaccttatcatgaacaacaatcgcatttccaccctggagacgggctgttttgtcaacctg
tccagcactctgcaggtcctcaggctcaaccgcaaccgcctctcaaccatccctgccaag
atcttccagctccccaacctccagcacctggagctgaacaggaatcgggtgcgcagggtg
gagggcctgacgttccacggtctgcactccctgcgctcgctgaagatccagaggaacggt
atcagccgcctgatggacggagccttctggggcctcagtaacatggaggtcctgcagctg
gactacaacaacctgacggaggtgagtaagggctggctgtacggcctgctgactctgcag
cagctccacctgggccacaacgccatcagccggatccagcccgacgcctgggagttctgc
cagaaactcagcgagctggacatctcgtccaaccacttgacaagactggaggagtccagc
tttgtgggcctcagcctgcttgacgaactccacatcgggaacaaccgtgtgagcttcatc
gcagacggagccttccgaggactctcccacctacagatgctagatctgcagaacaacgaa
atctcctggaccattgaagatatgaacggaccattttctgctctggacaaactgaggaaa
ctgttccttcaaggaaatcaaatccgctcggtgaccaagaagtcattctctggcctggac
acactggagcacctagatttgagtaacaacgcgatcatgtcggtccaagggaacgccttt
gtgcagatgaagaagcttgaggaactgcacctgaacacatccagcctgctgtgtgactgc
cagctcaagtggtttcctctgtgggtggcggagcaggccttcctgccctacgtgaacgcc
agctgtgcccatcccctgatgctgaagggcaagagcgtgttcaccgtcagacaggaggac
tttgtgtgtgacgacttccccaatcctcagatcacggtgcaacctgagacccagtcggcc
atcaaaagcaccaacgtcaccttcgtgtgctcggcggccagctccagcgactcacccatg
acctttgcctggaagaaggacaatgaggtcctgaatgacgctgaaatccacaaccaggca
cacctcagagcccagggaggaggccaaggccgtgaaacagaggttacagagtacaccacc
acactgcagctacgcagtgtagagttcaccagcgaggggaagtaccagtgtgtcatctca
aaccactttggttcctcctactccaccaaggccaagctcactgtcaacatgcttccgtcc
ttcaccaagatgcccatggacctgagtatccgggccggtgccacagccagactggagtgt
gccgccgtgggtcacccgtctccacagatcgcctggcagaaagacgggggcacagacttc
cccgccgcccgggagcgtcgtatgcacgtgatgcccgaggacgatgtgttcttcatcgtg
gatgtgaagacagaggacatcgggttgtacagctgcaccgcccagaataccgccggagcc
atatcagctaacgctacgctaactgtgctagaaacgccctccttcctgcgccctctcatg
gaccgcaccgtggccaaaggggagactgcggtcctccagtgtatcgccggcggcagccct
tcccccaggctcaactggaccaaagacgacaacccccttgtggtcacagagcgccacttt
ttcgccgccggcaaccagctgctcataatcgtggacgcagcggaggacgacgccgggatg
tacacgtgcgagatgtccaacacgctgggcacccagcggggcaacgtgcgcctagccgta
ctgcccaaccccaactgtgacgtgggggtgggcgcctcgggaggcgtaggctcggacgag
gacggctggaccacggtgggcatcgtcatcattgcggtggtgtgctgcgtggtgggcacc
tcgctggtctgggtggtcatcatctaccatacgcgtcggcgcaacgaggactgcagcgtc
accaacacagacgagaccaacctgcctgcagacatccccagctacctgtcctctcagggc
acgctggccgacagacaagatggctatgtcccctcagagagtggcagtggcaaccaccag
ttcatggcttcctccatgattggattctacatgcagcctaaagacatgaatggtctgtgt
cagctggacacgggaagtgaagcggacatggaggcggccatagatcccctgctctgccat
taccaaggacccatcagctctctcctcaggagaggcaacatgtacaccgaagaatcctca
gaggctttcacaggctgtgctatggaccagcggcccatctgcatagattcctacagtggc
agcctgaccagctccaagaggaggaactactatccatgtggcggggccctccaggaccca
tttgaccacgggagccccagtgtgctgatgcagatgcccaacggcagcagcttccacggg
ccacaccacctacagggcgaaggccccccctccatggacgagggagatggaagcgagtac
ggccgacctcgcgagacgaggctctcctcctccaacacatttatgggaacgtttgggaaa
gccccatggaggcctcaacaggaattataccccggatttggaccaccgccactggccctg
cacaacagcatgatgctacacgagaatccctacgcagccctggacacagactcggaacgc
gaggaagacaagaacagcgtccagtcaaagaattctaaatcggaatcggaaaagagcggc
aataatatctatgagaaaccatatgatctccacaggactgctactagtcagcaaggtcga
gtgagcacataa
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