Oncorhynchus nerka (sockeye salmon): 115119261
Help
Entry
115119261 CDS
T07952
Name
(RefSeq) probable ATP-dependent RNA helicase DDX17 isoform X1
KO
K13178
ATP-dependent RNA helicase DDX17 [EC:
5.6.2.7
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115119261
Enzymes [BR:
one01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115119261
Spliceosome [BR:
one03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
115119261
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
115119261
NCBI-ProteinID:
XP_029503887
LinkDB
All DBs
Position
Unknown
AA seq
657 aa
AA seq
DB search
MRGSSSYGDRDRDRGRDRGPRFGSSSWGGPPPMKKFGNPGERLRKKKWDLDELPKFEKNF
YNEHPELQRMTQYDIDEFRRRKEITVSGTGCPRAMTGFHHAQFPQYVMDVLLSQDFKEPT
SIQSQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPICLVLAPTRE
LAQQVQQVAHEYGKTSRIKSTCVYGGAPKGPQIRDLERGTEICIATPGRLIDFLEAGKTN
LRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKDVRQLAEDFLRDYV
QINVGALELSANHNILQIVDVCMENEKDNKLLQLMEEIMAEKENKTIIFVETKKRCDELT
RRMRRDGWPAMCIHGDKSQPERDWVLTEFRSSKAPILIATDVASRGLDVEDIKFVINYDY
PNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLRQARDLVRVLEEARQAINPKLLQLVNSG
HGGGGGGRMRYRGGGSSANNPNMMFQDVCERRMRSVSGGNKPDSRGSSFSRDGRSGGGRD
GDTRSSSSNRDRSRVSRGSYGSGGADQYQSYGGGTQYSSRAGGAANGAPRGSSGGGQNQS
SQPQGVFGPAPPPAAGPKPLMAQLMAPPQPPLMSFIGQPPYPFSPHPPPPPTPPPRK
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgagggggagttcgtcgtacggagaccgagatagagaccgtggacgagacagagggcct
cggtttgggtccagtagctggggaggccctccccctatgaagaagtttgggaaccctgga
gaacgccttcgcaagaagaagtgggatctggacgagctgcccaagtttgagaagaacttc
tacaacgagcacccagagctccagcgcatgactcagtatgacatagatgagttccgcagg
aggaaggagatcacagtcagcggtactggctgccccagggccatgaccggcttccaccat
gcacagtttccccagtatgtaatggatgtgctactgagtcaggacttcaaggaacccaca
tccatccagtcacagggcttccctctggccctgagtggcagggacatggtgggcatcgct
cagactggctccggcaagaccctggcatatctgcttcctgccattgtgcacatcaaccat
cagccctatctagagaggggagacggacctatttgcctggtcctggccccgaccagagag
ttggcccagcaggtgcagcaggtggctcatgaatatggcaagacctcccgcatcaagagt
acgtgtgtctatggaggagcacccaagggaccgcagatacgtgacctggagagaggtaca
gagatctgcatcgccaccccggggcgtctcatagacttcctggaggcagggaagaccaac
ctgcggcgctgcacctacctggtgctggacgaggctgaccgcatgctggacatgggcttc
gaaccacagatacgcaagatcgtggaccagatccggccggaccgccagactctgatgtgg
agtgccacctggcccaaggatgtgcgtcagctggcagaggacttcctgcgggattatgtc
cagatcaacgtaggagctctggagctcagcgccaaccacaacatcctgcagatagtggac
gtctgcatggagaacgagaaggacaacaagctgctccagctgatggaagagatcatggct
gagaaggagaacaagaccatcatctttgtggagacaaagaagcgctgtgacgagctcacc
cgcaggatgagaagagatgggtggccagccatgtgtatccatggggacaagagccagcca
gagagagactgggttctgacagaattccgtagcagcaaagcccctatcctcatcgccact
gacgtggcgtctcgcggtctggacgtggaggatatcaagtttgtcatcaactatgactac
cccaactcgtctgaggactacgtgcacaggatcggccgtacggcccgcagcaccaacaag
ggcacggcctacaccttcttcaccccgggtaacctgcgccaggccagggacctggtccga
gtcctggaggaggcccggcaggccatcaatcccaaactgctgcagctggttaactctgga
catgggggaggaggtggtggcaggatgcgttaccgtggcggcggctccagcgccaacaac
cccaacatgatgttccaggacgtgtgtgagcgtcgcatgcgctccgtcagtgggggcaac
aagccagacagccgcggcagcagctttagccgggacgggcgcagtggcgggggtcgggac
ggagacactaggtcctcatcctccaacagggaccgaagcagggtcagccgggggagttac
ggctccgggggggccgaccaataccagagctatggtggtggtacccagtacagctccagg
gctgggggagcagctaatggggcccctaggggtagtagtggtgggggccagaatcagtcc
agtcagccccagggtgtgttcggtccagctcctccacctgcagcagggcccaagcccctc
atggcccagctgatggccccgccacagccccctctcatgagcttcatagggcagcctccg
taccccttttctcctcacccgccgccacctcctacacccccacccaggaagtag
DBGET
integrated database retrieval system
