Oncorhynchus nerka (sockeye salmon): 115119422
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Entry
115119422 CDS
T07952
Name
(RefSeq) procollagen galactosyltransferase 2-like isoform X1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00310
Lysine degradation
one00514
Other types of O-glycan biosynthesis
one01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
115119422
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
115119422
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
one01003
]
115119422
Enzymes [BR:
one01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
115119422
Glycosyltransferases [BR:
one01003
]
O-Glycan biosynthesis
O-linked Gal type
115119422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Anp1
Glyco_tranf_2_4
Motif
Other DBs
NCBI-GeneID:
115119422
NCBI-ProteinID:
XP_029504065
LinkDB
All DBs
Position
Unknown
AA seq
590 aa
AA seq
DB search
MFLWVLVLGAFVSRSECYFSEEKYPEESKMQPPTVVIAIIARNAAHSLPYYLGALERLNY
PKARISVWAATDHNADNTTAVLREWLTVMQQFYHYVEWRPMEHPTSYPGEMGPKYWSNGR
YEYLMKLKQAALNFAKTRWADYILYADTDNILTNPETLNLLIAENKSVVAPMLDSQGAYS
NYWCGITPQGYYRRTAEYFPTRQRHRLGCYPVPMVHSTFLLDMRKTGMKKLAFHPPHLDY
SWPFDDIIVFAFSCRVSEVQMYLCNKVRYGYLNVPAKPHHTIEDDSISFSHLILEATIDG
PPMAPSKYVSLFPKQRDLMGFDEVYLINLRRRQDRRDRMLYSLNELEIDVKVVDAIDGGA
LNSSDIKILGVDILPGYYDPFSRRTLTKGEVGCFLSHYYIWKEMVDQQMDKALIFEDDVR
FQANFKRRVLRLMEEVEMVELDWDIIYLGRKQVKPGDEEVVENVRNLVVADYSYWTLSYA
ISLQGAQKLLNAEPLSKMLPVDEFLPIMYDKHTNENYKSHYPNRNLQAFSTRPLLVQPAQ
YAGDPKWVSDTETSTLWDDDNVRTDWRGSHKTLKGAPQPDMLQTSYKDEL
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgtttctttgggttttagttttaggggccttcgtttctagatcagaatgttacttttcg
gaggagaaatatccagaagaatcgaaaatgcagccgccaacggttgttattgcgatcatt
gctcggaacgcggcgcattccttgccgtactacctcggagcattggagagactgaactat
cccaaagcacgcatttctgtttgggcagcgacagatcacaatgctgacaacactacagct
gttctgagagaatggctgacagtcatgcaacagttttatcactacgtggaatggaggcct
atggagcatcctacgtcctacccaggagagatggggcctaaatactggagcaacggcaga
tatgaatacctgatgaaacttaaacaggctgctctcaacttcgccaagacacgctgggct
gactacatactgtacgctgacacagacaacatcctgaccaacccagagactctgaacctt
ctgatagcagagaacaagtctgttgtggcccccatgctggactctcagggagcctactcc
aactactggtgcggcatcactccccaaggttactaccggcgtacagctgagtatttcccc
accagacagcgccatcggctgggctgctacccggtgcccatggtccactctaccttcctg
ctggacatgaggaagacgggtatgaagaagctggccttccaccctcctcacctggactac
tcctggcccttcgatgacatcatcgtcttcgccttctcctgccgcgtctcagaggtgcag
atgtacctgtgtaacaaggtgaggtatggttacctgaacgtcccagccaagcctcaccac
accatagaggacgacagcatcagctttagtcatctcatcctggaggccaccatcgatggc
ccccccatggccccctctaaatacgtgagcctcttccccaaacagagagacctcatgggc
ttcgatgaggtgtacctgatcaacctgcgtcgtcgtcaggaccgtagagacaggatgctg
tattctctcaatgagctggagatagatgtcaaggtggtggacgccatcgatggaggagct
ctgaacagcagtgatataaagattctgggagtggacatactgcctggttactatgacccg
ttctctcgccgtaccctgacaaaaggagaggtgggatgcttcctgagtcattactacatc
tggaaggagatggtagaccagcagatggacaaggcgctgatcttcgaggatgacgtgcgt
ttccaggccaacttcaagcggcgcgtacttcgtctgatggaggaggtggagatggtggaa
ctggactgggacatcatttacctgggccgtaagcaggtgaagccaggtgatgaggaggtg
gtggagaacgtgaggaacctggtggtagcagactattcctactggaccctgtcctatgcc
atctctctccagggtgcccagaaacttctcaacgctgaacccctctccaagatgctgccc
gtcgacgaattcttacccataatgtacgacaaacacaccaatgagaactacaagtcccac
tatcctaaccgtaacctgcaggcgttctccacacgccccctactggtgcaaccagcccaa
tacgccggggaccccaagtgggtgagcgacacagagacctccacgctgtgggacgacgac
aacgtgcgaacagactggaggggctcccacaagacgctgaagggggctccccaacccgac
atgctgcagacgtcatataaagatgagctgtag
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