Oncorhynchus nerka (sockeye salmon): 115119649
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Entry
115119649 CDS
T07952
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3-like
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115119649
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115119649
Spliceosome [BR:
one03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
115119649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prp3_C
PWI
TPX2
Motif
Other DBs
NCBI-GeneID:
115119649
NCBI-ProteinID:
XP_029504372
LinkDB
All DBs
Position
Unknown
AA seq
540 aa
AA seq
DB search
MSLPKREVEELRPWVERTVKKVLGFSEPTVVTAALHCVGKGLDKRKTTDQLRPFLDESAG
GFVERLFEALEESRNSRGNKGAGERNRKRDLKDVFGDEVEVGARRDVPEAGDGVPVKRKR
VPRFEEVEEPEVLPAPPTESPVMLTKIQIKQMMEAATRQIEERKKQLSFVPTRLPQGVVR
LIFLHSLHSVKIGSAAPAHAPAEPPSPLIFSSAPSAPSSGSGPVQRSLPAANFHDTRCLR
GRPTLKANIRAVKREQFRQQLKEKPGEDLESTIYFDGRVNIAPAQRAKKGFKFHEQGLGK
LQTEIAQAAKKTGISGLHQAGPSCATRSALGDGSTETNFVALGVFGAKIPGWSTMLRSAP
PAVCVFVLRAHEEANAARKLTTEQRKEKKVKKLKEDLSLGVHISVYRIRNLHNPAKKFKV
EANANQLYLTGTVVLHRDVNMVVVEGGPKAQKKFKRLMLSRIKWEEHNSKRDDPDADDET
KKNNRCSLVWEGTAKERNYGEMKFKQCPTENMAREHFKKHGTEHYWDLALSQSVLESTDD
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttcctaaacgggaggtggaggagctacggccctgggtggaacggaccgtgaag
aaggtgctggggttctctgagcctacggtcgttactgcggccctgcactgtgtaggcaag
ggcctggacaagaggaagaccacggaccagctgcgtccattcctggatgagtctgccggt
gggttcgtggagagactctttgaggccctggaggagagccgcaattcccgtgggaacaag
ggtgctggggagaggaaccgcaagagagaccttaaggatgtgtttggtgatgaggtggag
gtgggtgcaaggcgggacgtccctgaggcaggagatggtgtgccggtgaagaggaaacgt
gttccccgcttcgaggaggtggaggaaccagaggtcctacctgcaccccctactgagagc
cctgtcatgctcactaaaatacagatcaaacagatgatggaggctgccaccagacagata
gaggagaggaagaaacagctgagcttcgtccccactcgtcttccacaaggggttgtgaga
ctaatcttcctccactctctccattctgtgaagatcggctcggctgccccggcccacgcc
ccagcagaacccccttcgccgctaatcttctcctccgctccctcggccccctcctcgggc
tctggcccagtccagcgctccctcccggcagctaactttcatgacacacgatgccttcga
ggaaggcccaccctcaaagctaatatccgtgcggtgaagagggagcagttccgtcagcag
ttgaaggagaagcctggcgaggacctggagtccactatctactttgacgggcgggttaac
atagcacccgcccagcgagccaagaagggcttcaagttccatgagcagggacttgggaag
ctgcagacagagatcgcccaggcagccaagaagaccgggatctccggcctccaccaagct
gggccctcctgtgccacaagaagtgctctgggggatggatccacagagaccaattttgtg
gcgcttggagtgtttggagcaaaaattcctggttggagcaccatgctcagatcagccccc
ccagctgtctgtgtgtttgtcctcagggcccatgaggaggccaatgcagcccggaagctc
acaaccgagcagagaaaagagaagaaggtgaagaagctgaaagaggacctgagtcttgga
gttcacatctcggtctataggatccgtaacctccacaacccggctaagaagtttaaggtg
gaagctaacgccaaccagctgtacctgacgggcaccgtggtgctacaccgagacgtcaac
atggtggtggtggagggaggtcccaaagcccagaagaagttcaagaggcttatgttgagc
agaatcaaatgggaagaacacaactccaagagagatgatccagatgcagacgatgagacc
aagaagaacaacagatgcagcctggtctgggagggcacggctaaggagcgtaactacggg
gagatgaagtttaagcagtgtcctacagagaacatggctagagaacactttaagaagcat
ggaacagaacactactgggacctggctctgagccagagtgtgctggagagcactgatgac
tga
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